RNA–Protein interactions for RNA: ENST00000630907.2

UBE3A-222, Transcript of ubiquitin protein ligase E3A, human

TSL 5

Gene UBE3A, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3A-222	ENST00000630907	GPR17	Q13304	367 aa		27.79	■■■□□ 2.04
UBE3A-222	ENST00000630907	ADAM15	Q13444	863 aa		27.79	■■■□□ 2.04
UBE3A-222	ENST00000630907	FILIP1L	Q4L180	1135 aa		27.79	■■■□□ 2.04
UBE3A-222	ENST00000630907	ARHGEF19	Q8IW93	802 aa		27.79	■■■□□ 2.04
UBE3A-222	ENST00000630907	PPM1K	Q8N3J5	372 aa		27.79	■■■□□ 2.04
UBE3A-222	ENST00000630907	ZNF461	Q8TAF7	563 aa		27.79	■■■□□ 2.04
UBE3A-222	ENST00000630907	ARID3A	Q99856	593 aa		27.79	■■■□□ 2.04
UBE3A-222	ENST00000630907	SYT15	Q9BQS2	421 aa		27.79	■■■□□ 2.04
UBE3A-222	ENST00000630907	NME7	Q9Y5B8	376 aa		27.79	■■■□□ 2.04
UBE3A-222	ENST00000630907	LINC01565	O15544	149 aa		27.78	■■■□□ 2.04
UBE3A-222	ENST00000630907	CD58	P19256	250 aa		27.78	■■■□□ 2.04
UBE3A-222	ENST00000630907	UBXN1	Q04323	297 aa		27.78	■■■□□ 2.04
UBE3A-222	ENST00000630907	INCA1	Q0VD86	236 aa		27.78	■■■□□ 2.04
UBE3A-222	ENST00000630907	KCNMA1	Q12791	1236 aa		27.78	■■■□□ 2.04
UBE3A-222	ENST00000630907	KCNC3	Q14003	757 aa		27.78	■■■□□ 2.04
UBE3A-222	ENST00000630907	SKIV2L	Q15477	1246 aa	Known RBP	27.78	■■■□□ 2.04
UBE3A-222	ENST00000630907	INTS6L	Q5JSJ4	861 aa	Known RBP	27.78	■■■□□ 2.04
UBE3A-222	ENST00000630907	TPGS2	Q68CL5	300 aa		27.78	■■■□□ 2.04
UBE3A-222	ENST00000630907	PHLDB3	Q6NSJ2	640 aa		27.78	■■■□□ 2.04
UBE3A-222	ENST00000630907	RRAGA	Q7L523	313 aa		27.78	■■■□□ 2.04
UBE3A-222	ENST00000630907	UNC93A	Q86WB7	457 aa		27.78	■■■□□ 2.04
UBE3A-222	ENST00000630907	TTC39C	Q8N584	583 aa		27.78	■■■□□ 2.04
UBE3A-222	ENST00000630907	VN1R2	Q8NFZ6	395 aa		27.78	■■■□□ 2.04
UBE3A-222	ENST00000630907	MAFA	Q8NHW3	353 aa	Predicted RBP	27.78	■■■□□ 2.04
UBE3A-222	ENST00000630907	FAM124B	Q9H5Z6	455 aa	Predicted RBP	27.78	■■■□□ 2.04
UBE3A-222	ENST00000630907	BARX2	Q9UMQ3	279 aa	Predicted RBP	27.78	■■■□□ 2.04
UBE3A-222	ENST00000630907	SPATA31D3	P0C874	917 aa		27.77	■■■□□ 2.04
UBE3A-222	ENST00000630907	SRGAP2B	P0DMP2	458 aa		27.77	■■■□□ 2.04
UBE3A-222	ENST00000630907	NDST1	P52848	882 aa		27.77	■■■□□ 2.04
UBE3A-222	ENST00000630907	YWHAE	P62258	255 aa	Known RBP	27.77	■■■□□ 2.04
UBE3A-222	ENST00000630907	RBM10	P98175	930 aa	Known RBP	27.77	■■■□□ 2.04
UBE3A-222	ENST00000630907	FANCC	Q00597	558 aa		27.77	■■■□□ 2.04
UBE3A-222	ENST00000630907	GCNT1	Q02742	428 aa		27.77	■■■□□ 2.04
UBE3A-222	ENST00000630907	COL19A1	Q14993	1142 aa		27.77	■■■□□ 2.04
UBE3A-222	ENST00000630907	SLC39A12	Q504Y0	691 aa		27.77	■■■□□ 2.04
UBE3A-222	ENST00000630907	TMEM184A	Q6ZMB5	413 aa		27.77	■■■□□ 2.04
UBE3A-222	ENST00000630907	SPATA31D4	Q6ZUB0	917 aa		27.77	■■■□□ 2.04
UBE3A-222	ENST00000630907	LRRTM3	Q86VH5	581 aa		27.77	■■■□□ 2.04
UBE3A-222	ENST00000630907	KREMEN2	Q8NCW0	462 aa		27.77	■■■□□ 2.04
UBE3A-222	ENST00000630907	CASP10	Q92851	521 aa		27.77	■■■□□ 2.04
UBE3A-222	ENST00000630907	RTN4	Q9NQC3	1192 aa	Known RBP	27.77	■■■□□ 2.04
UBE3A-222	ENST00000630907	CISH	Q9NSE2	258 aa		27.77	■■■□□ 2.04
UBE3A-222	ENST00000630907	CLDND1	Q9NY35	253 aa		27.77	■■■□□ 2.04
UBE3A-222	ENST00000630907	AFF4	Q9UHB7	1163 aa	Known RBP	27.77	■■■□□ 2.04
UBE3A-222	ENST00000630907	DPP7	Q9UHL4	492 aa		27.77	■■■□□ 2.04
UBE3A-222	ENST00000630907	CILP	O75339	1184 aa		27.76	■■■□□ 2.03
UBE3A-222	ENST00000630907	SMARCB1	Q12824	385 aa		27.76	■■■□□ 2.03
UBE3A-222	ENST00000630907	CTC1	Q2NKJ3	1217 aa		27.76	■■■□□ 2.03
UBE3A-222	ENST00000630907	RNF19B	Q6ZMZ0	732 aa		27.76	■■■□□ 2.03
UBE3A-222	ENST00000630907	HDAC7	Q8WUI4	952 aa		27.76	■■■□□ 2.03
UBE3A-222	ENST00000630907	KAT5	Q92993	513 aa		27.76	■■■□□ 2.03
UBE3A-222	ENST00000630907	PABPC5	Q96DU9	382 aa	Known RBP	27.76	■■■□□ 2.03
UBE3A-222	ENST00000630907	FAM81B	Q96LP2	452 aa		27.76	■■■□□ 2.03
UBE3A-222	ENST00000630907	LSM14B	Q9BX40	385 aa	Known RBP	27.76	■■■□□ 2.03
UBE3A-222	ENST00000630907	UBE2T	Q9NPD8	197 aa	Predicted RBP	27.76	■■■□□ 2.03
UBE3A-222	ENST00000630907	APEX2	Q9UBZ4	518 aa		27.76	■■■□□ 2.03
UBE3A-222	ENST00000630907	FBXW11	Q9UKB1	542 aa		27.76	■■■□□ 2.03
UBE3A-222	ENST00000630907	ATP2C2	O75185	946 aa		27.75	■■■□□ 2.03
UBE3A-222	ENST00000630907	GLP2R	O95838	553 aa		27.75	■■■□□ 2.03
UBE3A-222	ENST00000630907	ATF2	P15336	505 aa		27.75	■■■□□ 2.03
UBE3A-222	ENST00000630907	PTPN1	P18031	435 aa	Known RBP	27.75	■■■□□ 2.03
UBE3A-222	ENST00000630907	ELF1	P32519	619 aa		27.75	■■■□□ 2.03
UBE3A-222	ENST00000630907	PSMC1	P62191	440 aa	Known RBP	27.75	■■■□□ 2.03
UBE3A-222	ENST00000630907	APBA1	Q02410	837 aa		27.75	■■■□□ 2.03
UBE3A-222	ENST00000630907	ELMSAN1	Q6PJG2	1045 aa		27.75	■■■□□ 2.03
UBE3A-222	ENST00000630907	EP400NL	Q6ZTU2	488 aa		27.75	■■■□□ 2.03
UBE3A-222	ENST00000630907	TNIP3	Q96KP6	325 aa		27.75	■■■□□ 2.03
UBE3A-222	ENST00000630907	NAP1L5	Q96NT1	182 aa	Predicted RBP	27.75	■■■□□ 2.03
UBE3A-222	ENST00000630907	PGLYRP2	Q96PD5	576 aa		27.75	■■■□□ 2.03
UBE3A-222	ENST00000630907	PKMYT1	Q99640	499 aa		27.75	■■■□□ 2.03
UBE3A-222	ENST00000630907	DNAI2	Q9GZS0	605 aa		27.75	■■■□□ 2.03
UBE3A-222	ENST00000630907	DPEP3	Q9H4B8	488 aa		27.75	■■■□□ 2.03
UBE3A-222	ENST00000630907	PLEKHA4	Q9H4M7	779 aa		27.75	■■■□□ 2.03
UBE3A-222	ENST00000630907	SIX2	Q9NPC8	291 aa		27.75	■■■□□ 2.03
UBE3A-222	ENST00000630907	CRTAC1	Q9NQ79	661 aa		27.75	■■■□□ 2.03
UBE3A-222	ENST00000630907	MAN1C1	Q9NR34	630 aa		27.75	■■■□□ 2.03
UBE3A-222	ENST00000630907	GTF3C4	Q9UKN8	822 aa		27.75	■■■□□ 2.03
UBE3A-222	ENST00000630907	MAFF	Q9ULX9	164 aa		27.75	■■■□□ 2.03
UBE3A-222	ENST00000630907		A0A1B0GTH6	734 aa		27.74	■■■□□ 2.03
UBE3A-222	ENST00000630907	MYBPHL	A2RUH7	354 aa		27.74	■■■□□ 2.03
UBE3A-222	ENST00000630907	MFAP3	P55082	362 aa		27.74	■■■□□ 2.03
UBE3A-222	ENST00000630907	ADCY1	Q08828	1119 aa		27.74	■■■□□ 2.03
UBE3A-222	ENST00000630907	SYCP1	Q15431	976 aa		27.74	■■■□□ 2.03
UBE3A-222	ENST00000630907	MAPRE1	Q15691	268 aa	Known RBP	27.74	■■■□□ 2.03
UBE3A-222	ENST00000630907	NFE2	Q16621	373 aa	Predicted RBP	27.74	■■■□□ 2.03
UBE3A-222	ENST00000630907	FAM171B	Q6P995	826 aa		27.74	■■■□□ 2.03
UBE3A-222	ENST00000630907	GJB7	Q6PEY0	223 aa		27.74	■■■□□ 2.03
UBE3A-222	ENST00000630907	ENOSF1	Q7L5Y1	443 aa		27.74	■■■□□ 2.03
UBE3A-222	ENST00000630907	WHAMM	Q8TF30	809 aa		27.74	■■■□□ 2.03
UBE3A-222	ENST00000630907	KREMEN1	Q96MU8	473 aa		27.74	■■■□□ 2.03
UBE3A-222	ENST00000630907	NT5C1A	Q9BXI3	368 aa		27.74	■■■□□ 2.03
UBE3A-222	ENST00000630907	TMLHE	Q9NVH6	421 aa		27.74	■■■□□ 2.03
UBE3A-222	ENST00000630907	DZANK1	Q9NVP4	752 aa		27.74	■■■□□ 2.03
UBE3A-222	ENST00000630907	HMGXB4	Q9UGU5	601 aa		27.74	■■■□□ 2.03
UBE3A-222	ENST00000630907	MTMR11	A4FU01	709 aa		27.73	■■■□□ 2.03
UBE3A-222	ENST00000630907	TEX33	O43247	280 aa		27.73	■■■□□ 2.03
UBE3A-222	ENST00000630907	TRIM21	P19474	475 aa	Known RBP	27.73	■■■□□ 2.03
UBE3A-222	ENST00000630907	ORC1	Q13415	861 aa		27.73	■■■□□ 2.03
UBE3A-222	ENST00000630907	LIN9	Q5TKA1	542 aa		27.73	■■■□□ 2.03
UBE3A-222	ENST00000630907	DPY19L2P1	Q6NXN4	242 aa		27.73	■■■□□ 2.03

Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms