RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 PRPF31Q8WWY3 499 aaKnown RBP5.29□□□□□ -1.56
LINC00550-201ENST00000629293 ERCC4Q92889 916 aaPredicted RBP5.29□□□□□ -1.56
LINC00550-201ENST00000629293 LENG9Q96B70 501 aa5.29□□□□□ -1.56
LINC00550-201ENST00000629293 CPB2Q96IY4 423 aa5.29□□□□□ -1.56
LINC00550-201ENST00000629293 CEP63Q96MT8 703 aa5.29□□□□□ -1.56
LINC00550-201ENST00000629293 NAT10Q9H0A0 1025 aaKnown RBP5.29□□□□□ -1.56
LINC00550-201ENST00000629293 RUBCNLQ9H714 662 aa5.29□□□□□ -1.56
LINC00550-201ENST00000629293 SFXN1Q9H9B4 322 aa5.29□□□□□ -1.56
LINC00550-201ENST00000629293 KCNJ14Q9UNX9 436 aa5.29□□□□□ -1.56
LINC00550-201ENST00000629293 MAPK8IP1Q9UQF2 711 aa5.29□□□□□ -1.56
LINC00550-201ENST00000629293 MORC2Q9Y6X9 1032 aaPredicted RBP5.29□□□□□ -1.56
LINC00550-201ENST00000629293 CACNA1EQ15878 2313 aa5.29□□□□□ -1.56
LINC00550-201ENST00000629293 NRP1O14786 923 aa5.28□□□□□ -1.56
LINC00550-201ENST00000629293 TEX28O15482 410 aa5.28□□□□□ -1.56
LINC00550-201ENST00000629293 PDPK1O15530 556 aa5.28□□□□□ -1.56
LINC00550-201ENST00000629293 CTIFO43310 598 aaKnown RBP5.28□□□□□ -1.56
LINC00550-201ENST00000629293 LRRN2O75325 713 aa5.28□□□□□ -1.56
LINC00550-201ENST00000629293 GLUD1P00367 558 aa5.28□□□□□ -1.56
LINC00550-201ENST00000629293 SFNP31947 248 aa5.28□□□□□ -1.56
LINC00550-201ENST00000629293 SEZ6Q53EL9 994 aa5.28□□□□□ -1.56
LINC00550-201ENST00000629293 XKR9Q5GH70 373 aa5.28□□□□□ -1.56
LINC00550-201ENST00000629293 NCAPH2Q6IBW4 605 aa5.28□□□□□ -1.56
LINC00550-201ENST00000629293 DTHD1Q6ZMT9 781 aa5.28□□□□□ -1.56
LINC00550-201ENST00000629293 DDX53Q86TM3 631 aaKnown RBP5.28□□□□□ -1.56
LINC00550-201ENST00000629293 ELOA2Q8IYF1 753 aaPredicted RBP5.28□□□□□ -1.56
LINC00550-201ENST00000629293 TMEM102Q8N9M5 508 aaPredicted RBP5.28□□□□□ -1.56
LINC00550-201ENST00000629293 PSPC1Q8WXF1 523 aaKnown RBP5.28□□□□□ -1.56
LINC00550-201ENST00000629293 PGBD4Q96DM1 585 aa5.28□□□□□ -1.56
LINC00550-201ENST00000629293 KLHL5Q96PQ7 755 aa5.28□□□□□ -1.56
LINC00550-201ENST00000629293 VN1R3Q9BXE9 311 aa5.28□□□□□ -1.56
LINC00550-201ENST00000629293 HSD3B7Q9H2F3 369 aa5.28□□□□□ -1.56
LINC00550-201ENST00000629293 MINDY3Q9H8M7 445 aa5.28□□□□□ -1.56
LINC00550-201ENST00000629293 RGL1Q9NZL6 768 aa5.28□□□□□ -1.56
LINC00550-201ENST00000629293 DDX25Q9UHL0 483 aaKnown RBP5.28□□□□□ -1.56
LINC00550-201ENST00000629293 KIAA1671Q9BY89 1806 aa5.28□□□□□ -1.56
LINC00550-201ENST00000629293 BECN2A8MW95 431 aa5.28□□□□□ -1.56
LINC00550-201ENST00000629293 IKBKBO14920 756 aa5.28□□□□□ -1.56
LINC00550-201ENST00000629293 INPPL1O15357 1258 aa5.28□□□□□ -1.56
LINC00550-201ENST00000629293 GAS2O43903 313 aaKnown RBP5.28□□□□□ -1.56
LINC00550-201ENST00000629293 CUTAO60888 179 aa5.28□□□□□ -1.56
LINC00550-201ENST00000629293 N4BP1O75113 896 aaKnown RBP5.28□□□□□ -1.56
LINC00550-201ENST00000629293 GJB6O95452 261 aa5.28□□□□□ -1.56
LINC00550-201ENST00000629293 ITGA4P13612 1032 aa5.28□□□□□ -1.56
LINC00550-201ENST00000629293 AOC1P19801 751 aa5.28□□□□□ -1.56
LINC00550-201ENST00000629293 AKAP5P24588 427 aa5.28□□□□□ -1.56
LINC00550-201ENST00000629293 CLCN5P51795 746 aa5.28□□□□□ -1.56
LINC00550-201ENST00000629293 CWF19L1Q69YN2 538 aaKnown RBP5.28□□□□□ -1.56
LINC00550-201ENST00000629293 ANO5Q75V66 913 aa5.28□□□□□ -1.56
LINC00550-201ENST00000629293 SPATC1Q76KD6 591 aa5.28□□□□□ -1.56
LINC00550-201ENST00000629293 GPR149Q86SP6 731 aa5.28□□□□□ -1.56
LINC00550-201ENST00000629293 PPFIBP1Q86W92 1011 aa5.28□□□□□ -1.56
LINC00550-201ENST00000629293 TPH2Q8IWU9 490 aa5.28□□□□□ -1.56
LINC00550-201ENST00000629293 DTWD2Q8NBA8 298 aa5.28□□□□□ -1.56
LINC00550-201ENST00000629293 RIT2Q99578 217 aa5.28□□□□□ -1.56
LINC00550-201ENST00000629293 FOXQ1Q9C009 403 aa5.28□□□□□ -1.56
LINC00550-201ENST00000629293 TBC1D17Q9HA65 648 aa5.28□□□□□ -1.56
LINC00550-201ENST00000629293 TIMMDC1Q9NPL8 285 aa5.28□□□□□ -1.56
LINC00550-201ENST00000629293 CCDC194A0A1B0GVG4 234 aa5.27□□□□□ -1.57
LINC00550-201ENST00000629293 PRPF3O43395 683 aaKnown RBP5.27□□□□□ -1.57
LINC00550-201ENST00000629293 PDGFRBP09619 1106 aa5.27□□□□□ -1.57
LINC00550-201ENST00000629293 FAM157BP0CG42 384 aa5.27□□□□□ -1.57
LINC00550-201ENST00000629293 EPB42P16452 691 aa5.27□□□□□ -1.57
LINC00550-201ENST00000629293 SSRP1Q08945 709 aaKnown RBP5.27□□□□□ -1.57
LINC00550-201ENST00000629293 CTTNQ14247 550 aaKnown RBP5.27□□□□□ -1.57
LINC00550-201ENST00000629293 ARSHQ5FYA8 562 aa5.27□□□□□ -1.57
LINC00550-201ENST00000629293 NOSTRINQ8IVI9 506 aa5.27□□□□□ -1.57
LINC00550-201ENST00000629293 DRC7Q8IY82 874 aa5.27□□□□□ -1.57
LINC00550-201ENST00000629293 PGBD3Q8N328 593 aa5.27□□□□□ -1.57
LINC00550-201ENST00000629293 SLC22A17Q8WUG5 538 aa5.27□□□□□ -1.57
LINC00550-201ENST00000629293 UBE2Q2Q8WVN8 375 aa5.27□□□□□ -1.57
LINC00550-201ENST00000629293 WASF1Q92558 559 aa5.27□□□□□ -1.57
LINC00550-201ENST00000629293 STAMQ92783 540 aa5.27□□□□□ -1.57
LINC00550-201ENST00000629293 EIF2AQ9BY44 585 aaKnown RBP5.27□□□□□ -1.57
LINC00550-201ENST00000629293 CHST12Q9NRB3 414 aa5.27□□□□□ -1.57
LINC00550-201ENST00000629293 IMPACTQ9P2X3 320 aa5.27□□□□□ -1.57
LINC00550-201ENST00000629293 ESYT2A0FGR8 921 aa5.27□□□□□ -1.57
LINC00550-201ENST00000629293 KRBA1A5PL33 1030 aa5.27□□□□□ -1.57
LINC00550-201ENST00000629293 SLC37A4O43826 429 aa5.27□□□□□ -1.57
LINC00550-201ENST00000629293 CCNT1O60563 726 aaKnown RBP5.27□□□□□ -1.57
LINC00550-201ENST00000629293 RHOQP17081 205 aa5.27□□□□□ -1.57
LINC00550-201ENST00000629293 MARCKSP29966 332 aaPredicted RBP5.27□□□□□ -1.57
LINC00550-201ENST00000629293 NBL1P41271 181 aa5.27□□□□□ -1.57
LINC00550-201ENST00000629293 SYKP43405 635 aa5.27□□□□□ -1.57
LINC00550-201ENST00000629293 GLUD2P49448 558 aa5.27□□□□□ -1.57
LINC00550-201ENST00000629293 CDKN1CP49918 316 aaPredicted RBP5.27□□□□□ -1.57
LINC00550-201ENST00000629293 TOB1P50616 345 aaPredicted RBP5.27□□□□□ -1.57
LINC00550-201ENST00000629293 RAB27AP51159 221 aa5.27□□□□□ -1.57
LINC00550-201ENST00000629293 CLCN4P51793 760 aa5.27□□□□□ -1.57
LINC00550-201ENST00000629293 PSMC5P62195 406 aa5.27□□□□□ -1.57
LINC00550-201ENST00000629293 NTHL1P78549 312 aa5.27□□□□□ -1.57
LINC00550-201ENST00000629293 NCBP1Q09161 790 aaKnown RBP5.27□□□□□ -1.57
LINC00550-201ENST00000629293 LAMTOR4Q0VGL1 99 aa5.27□□□□□ -1.57
LINC00550-201ENST00000629293 CCINQ13939 588 aa5.27□□□□□ -1.57
LINC00550-201ENST00000629293 SEPT6Q14141 434 aa5.27□□□□□ -1.57
LINC00550-201ENST00000629293 MPP2Q14168 576 aa5.27□□□□□ -1.57
LINC00550-201ENST00000629293 UBXN2BQ14CS0 331 aa5.27□□□□□ -1.57
LINC00550-201ENST00000629293 NONOQ15233 471 aaKnown RBP eCLIP5.27□□□□□ -1.57
LINC00550-201ENST00000629293 TTC39BQ5VTQ0 682 aaPredicted RBP5.27□□□□□ -1.57
LINC00550-201ENST00000629293 RAVER1Q8IY67 606 aaKnown RBP5.27□□□□□ -1.57
LINC00550-201ENST00000629293 ZDHHC14Q8IZN3 488 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms