RNA–Protein interactions for RNA: ENST00000627714.2

PTBP1-220, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 5 BASIC

Gene PTBP1, Length 2,201 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-220ENST00000627714 CATSPERGQ6ZRH7 1159 aa20.23■□□□□ 0.83
PTBP1-220ENST00000627714 SMC6Q96SB8 1091 aa20.23■□□□□ 0.83
PTBP1-220ENST00000627714 EGFRP00533 1210 aa20.23■□□□□ 0.83
PTBP1-220ENST00000627714 CCNB1P14635 433 aa20.23■□□□□ 0.83
PTBP1-220ENST00000627714 CDKN2BP42772 138 aa20.23■□□□□ 0.83
PTBP1-220ENST00000627714 WDR4P57081 412 aaKnown RBP20.23■□□□□ 0.83
PTBP1-220ENST00000627714 IRX3P78415 501 aaPredicted RBP20.23■□□□□ 0.83
PTBP1-220ENST00000627714 CAPSQ13938 189 aa20.23■□□□□ 0.83
PTBP1-220ENST00000627714 SGSM1Q2NKQ1 1148 aa20.23■□□□□ 0.83
PTBP1-220ENST00000627714 ASRGL1Q7L266 308 aa20.23■□□□□ 0.83
PTBP1-220ENST00000627714 PRUNE1Q86TP1 453 aa20.23■□□□□ 0.83
PTBP1-220ENST00000627714 DENND1AQ8TEH3 1009 aa20.23■□□□□ 0.83
PTBP1-220ENST00000627714 TRABDQ9H4I3 376 aa20.23■□□□□ 0.83
PTBP1-220ENST00000627714 HOXC10Q9NYD6 342 aa20.23■□□□□ 0.83
PTBP1-220ENST00000627714 HACL1Q9UJ83 578 aa20.23■□□□□ 0.83
PTBP1-220ENST00000627714 SSC5DA1L4H1 1573 aa20.23■□□□□ 0.83
PTBP1-220ENST00000627714 F8VP50 259 aa20.22■□□□□ 0.83
PTBP1-220ENST00000627714 IGF2BP3O00425 579 aaKnown RBP eCLIP20.22■□□□□ 0.833e-6■■□□□ 12.2
PTBP1-220ENST00000627714 ATP5HO75947 161 aa20.22■□□□□ 0.83
PTBP1-220ENST00000627714 FOXN2P32314 431 aa20.22■□□□□ 0.83
PTBP1-220ENST00000627714 KCNJ2P63252 427 aa20.22■□□□□ 0.83
PTBP1-220ENST00000627714 TARBP2Q15633 366 aaKnown RBP20.22■□□□□ 0.83
PTBP1-220ENST00000627714 GLIS1Q8NBF1 620 aa20.22■□□□□ 0.83
PTBP1-220ENST00000627714 TTC13Q8NBP0 860 aa20.22■□□□□ 0.83
PTBP1-220ENST00000627714 MRPL4Q9BYD3 311 aaKnown RBP20.22■□□□□ 0.83
PTBP1-220ENST00000627714 SSU72Q9NP77 194 aaKnown RBP20.22■□□□□ 0.83
PTBP1-220ENST00000627714 GGT7Q9UJ14 662 aa20.22■□□□□ 0.83
PTBP1-220ENST00000627714 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.22■□□□□ 0.83
PTBP1-220ENST00000627714 TOM1L1O75674 476 aa20.22■□□□□ 0.83
PTBP1-220ENST00000627714 TCF4P15884 667 aa20.22■□□□□ 0.83
PTBP1-220ENST00000627714 KRT15P19012 456 aa20.22■□□□□ 0.83
PTBP1-220ENST00000627714 YWHAEP62258 255 aaKnown RBP20.22■□□□□ 0.83
PTBP1-220ENST00000627714 SEPT14Q6ZU15 432 aa20.22■□□□□ 0.83
PTBP1-220ENST00000627714 ERICH1Q86X53 443 aa20.22■□□□□ 0.83
PTBP1-220ENST00000627714 ZNF526Q8TF50 670 aaPredicted RBP20.22■□□□□ 0.83
PTBP1-220ENST00000627714 RMDN2Q96LZ7 410 aa20.22■□□□□ 0.83
PTBP1-220ENST00000627714 WRNIP1Q96S55 665 aa20.22■□□□□ 0.83
PTBP1-220ENST00000627714 VPS37BQ9H9H4 285 aa20.22■□□□□ 0.83
PTBP1-220ENST00000627714 CISHQ9NSE2 258 aa20.22■□□□□ 0.83
PTBP1-220ENST00000627714 TXLNGQ9NUQ3 528 aa20.22■□□□□ 0.83
PTBP1-220ENST00000627714 LRRD1A4D1F6 860 aa20.21■□□□□ 0.83
PTBP1-220ENST00000627714 ZSCAN5DPP0CG00 497 aa20.21■□□□□ 0.83
PTBP1-220ENST00000627714 POLR2BP30876 1174 aaKnown RBP20.21■□□□□ 0.83
PTBP1-220ENST00000627714 ALDH5A1P51649 535 aaPredicted RBP20.21■□□□□ 0.83
PTBP1-220ENST00000627714 SETDB1Q15047 1291 aa20.21■□□□□ 0.83
PTBP1-220ENST00000627714 PDK4Q16654 411 aa20.21■□□□□ 0.83
PTBP1-220ENST00000627714 DUOXA2Q1HG44 320 aa20.21■□□□□ 0.83
PTBP1-220ENST00000627714 FAM160B1Q5W0V3 765 aa20.21■□□□□ 0.83
PTBP1-220ENST00000627714 CHST13Q8NET6 341 aa20.21■□□□□ 0.83
PTBP1-220ENST00000627714 SLC35B2Q8TB61 432 aa20.21■□□□□ 0.83
PTBP1-220ENST00000627714 PSMC3IPQ9P2W1 217 aaPredicted RBP20.21■□□□□ 0.83
PTBP1-220ENST00000627714 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.21■□□□□ 0.83
PTBP1-220ENST00000627714 LCTP09848 1927 aa20.21■□□□□ 0.83
PTBP1-220ENST00000627714 SMAPO00193 183 aa20.21■□□□□ 0.83
PTBP1-220ENST00000627714 FAM189A1O60320 539 aa20.21■□□□□ 0.83
PTBP1-220ENST00000627714 CST3P01034 146 aaPredicted RBP20.21■□□□□ 0.83
PTBP1-220ENST00000627714 EDN1P05305 212 aa20.21■□□□□ 0.83
PTBP1-220ENST00000627714 HARSP12081 509 aaKnown RBP20.21■□□□□ 0.83
PTBP1-220ENST00000627714 PHBP35232 272 aa20.21■□□□□ 0.83
PTBP1-220ENST00000627714 E2F5Q15329 346 aa20.21■□□□□ 0.83
PTBP1-220ENST00000627714 GPAT2Q6NUI2 795 aa20.21■□□□□ 0.83
PTBP1-220ENST00000627714 ZBED8Q8IZ13 594 aa20.21■□□□□ 0.83
PTBP1-220ENST00000627714 PRCCQ92733 491 aaPredicted RBP20.21■□□□□ 0.83
PTBP1-220ENST00000627714 CAMKK2Q96RR4 588 aa20.21■□□□□ 0.83
PTBP1-220ENST00000627714 EBF2Q9HAK2 575 aa20.21■□□□□ 0.83
PTBP1-220ENST00000627714 USH1CQ9Y6N9 552 aa20.21■□□□□ 0.83
PTBP1-220ENST00000627714 POC1B-GALNT4F8VUJ3 575 aa20.2■□□□□ 0.82
PTBP1-220ENST00000627714 SGK1O00141 431 aa20.2■□□□□ 0.82
PTBP1-220ENST00000627714 UNC5CO95185 931 aa20.2■□□□□ 0.82
PTBP1-220ENST00000627714 KRT7P08729 469 aa20.2■□□□□ 0.82
PTBP1-220ENST00000627714 BRD2P25440 801 aaKnown RBP20.2■□□□□ 0.82
PTBP1-220ENST00000627714 YARSP54577 528 aaKnown RBP20.2■□□□□ 0.82
PTBP1-220ENST00000627714 OGDHQ02218 1023 aa20.2■□□□□ 0.82
PTBP1-220ENST00000627714 ADCY1Q08828 1119 aa20.2■□□□□ 0.82
PTBP1-220ENST00000627714 WDR72Q3MJ13 1102 aa20.2■□□□□ 0.82
PTBP1-220ENST00000627714 ZC3H12AQ5D1E8 599 aaKnown RBP20.2■□□□□ 0.82
PTBP1-220ENST00000627714 ECHDC2Q86YB7 292 aa20.2■□□□□ 0.82
PTBP1-220ENST00000627714 RAB3IPQ96QF0 476 aaPredicted RBP20.2■□□□□ 0.82
PTBP1-220ENST00000627714 PAIP2Q9BPZ3 127 aaKnown RBP20.2■□□□□ 0.82
PTBP1-220ENST00000627714 OGTO15294 1046 aa20.19■□□□□ 0.82
PTBP1-220ENST00000627714 MAFO75444 373 aaPredicted RBP20.19■□□□□ 0.82
PTBP1-220ENST00000627714 MYL6P60660 151 aa20.19■□□□□ 0.82
PTBP1-220ENST00000627714 PLCB3Q01970 1234 aa20.19■□□□□ 0.82
PTBP1-220ENST00000627714 MGAT5Q09328 741 aa20.19■□□□□ 0.82
PTBP1-220ENST00000627714 TRPC3Q13507 836 aa20.19■□□□□ 0.82
PTBP1-220ENST00000627714 HIF1AQ16665 826 aa20.19■□□□□ 0.82
PTBP1-220ENST00000627714 EFHC2Q5JST6 749 aa20.19■□□□□ 0.82
PTBP1-220ENST00000627714 FNIP1Q8TF40 1166 aa20.19■□□□□ 0.82
PTBP1-220ENST00000627714 MTMR12Q9C0I1 747 aa20.19■□□□□ 0.82
PTBP1-220ENST00000627714 PHTF1Q9UMS5 762 aa20.19■□□□□ 0.82
PTBP1-220ENST00000627714 FARP1Q9Y4F1 1045 aaPredicted RBP20.19■□□□□ 0.82
PTBP1-220ENST00000627714 GAS2O43903 313 aaKnown RBP20.19■□□□□ 0.82
PTBP1-220ENST00000627714 MSCO60682 206 aa20.19■□□□□ 0.82
PTBP1-220ENST00000627714 ETS1P14921 441 aa20.19■□□□□ 0.82
PTBP1-220ENST00000627714 CCND1P24385 295 aa20.19■□□□□ 0.82
PTBP1-220ENST00000627714 ALDH3A1P30838 453 aa20.19■□□□□ 0.82
PTBP1-220ENST00000627714 ELF1P32519 619 aa20.19■□□□□ 0.82
PTBP1-220ENST00000627714 LACTBP83111 547 aaPredicted RBP20.19■□□□□ 0.82
PTBP1-220ENST00000627714 PDIA2Q13087 525 aaKnown RBP20.19■□□□□ 0.82
PTBP1-220ENST00000627714 FASTKD3Q14CZ7 662 aaKnown RBP20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms