RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 FTHL17Q9BXU8 183 aa10.15□□□□□ -0.78
PDLIM5-223ENST00000627587 RNF19AQ9NV58 838 aa10.15□□□□□ -0.78
PDLIM5-223ENST00000627587 CLDND1Q9NY35 253 aa10.15□□□□□ -0.78
PDLIM5-223ENST00000627587 TDRD15B5MCY1 1934 aaKnown RBP10.15□□□□□ -0.79
PDLIM5-223ENST00000627587 FAM170AA1A519 330 aa10.15□□□□□ -0.79
PDLIM5-223ENST00000627587 MEIS3P2A8K0S8 358 aa10.15□□□□□ -0.79
PDLIM5-223ENST00000627587 H3BQ06 376 aaPredicted RBP10.15□□□□□ -0.79
PDLIM5-223ENST00000627587 ITGB3P05106 788 aa10.15□□□□□ -0.79
PDLIM5-223ENST00000627587 KRT5P13647 590 aa10.15□□□□□ -0.79
PDLIM5-223ENST00000627587 AKAP5P24588 427 aa10.15□□□□□ -0.79
PDLIM5-223ENST00000627587 CASQ1P31415 396 aa10.15□□□□□ -0.79
PDLIM5-223ENST00000627587 YARSP54577 528 aaKnown RBP10.15□□□□□ -0.79
PDLIM5-223ENST00000627587 ZP2Q05996 745 aa10.15□□□□□ -0.79
PDLIM5-223ENST00000627587 TMEM132DQ14C87 1099 aa10.15□□□□□ -0.79
PDLIM5-223ENST00000627587 XKR4Q5GH76 650 aa10.15□□□□□ -0.79
PDLIM5-223ENST00000627587 EP400NLQ6ZTU2 488 aa10.15□□□□□ -0.79
PDLIM5-223ENST00000627587 SDCBP2Q9H190 292 aa10.15□□□□□ -0.79
PDLIM5-223ENST00000627587 PLEKHA5Q9HAU0 1116 aa10.15□□□□□ -0.79
PDLIM5-223ENST00000627587 CNTN3Q9P232 1028 aa10.15□□□□□ -0.79
PDLIM5-223ENST00000627587 POLIQ9UNA4 740 aa10.15□□□□□ -0.79
PDLIM5-223ENST00000627587 ST3GAL5Q9UNP4 418 aa10.15□□□□□ -0.79
PDLIM5-223ENST00000627587 IPPQ9Y573 584 aa10.15□□□□□ -0.79
PDLIM5-223ENST00000627587 NLRC5Q86WI3 1866 aa10.15□□□□□ -0.79
PDLIM5-223ENST00000627587 BTNL10A8MVZ5 291 aa10.14□□□□□ -0.79
PDLIM5-223ENST00000627587 PPEF2O14830 753 aa10.14□□□□□ -0.79
PDLIM5-223ENST00000627587 MGEA5O60502 916 aa10.14□□□□□ -0.79
PDLIM5-223ENST00000627587 RPS6KA5O75582 802 aa10.14□□□□□ -0.79
PDLIM5-223ENST00000627587 MOCS3O95396 460 aa10.14□□□□□ -0.79
PDLIM5-223ENST00000627587 CFHP08603 1231 aa10.14□□□□□ -0.79
PDLIM5-223ENST00000627587 KRT19P08727 400 aa10.14□□□□□ -0.79
PDLIM5-223ENST00000627587 TNFAIP3P21580 790 aa10.14□□□□□ -0.79
PDLIM5-223ENST00000627587 PDE6CP51160 858 aa10.14□□□□□ -0.79
PDLIM5-223ENST00000627587 AMPD2Q01433 879 aa10.14□□□□□ -0.79
PDLIM5-223ENST00000627587 BTG3Q14201 252 aaPredicted RBP10.14□□□□□ -0.79
PDLIM5-223ENST00000627587 SMAD2Q15796 467 aaKnown RBP10.14□□□□□ -0.79
PDLIM5-223ENST00000627587 ZNF699Q32M78 642 aa10.14□□□□□ -0.79
PDLIM5-223ENST00000627587 FBXO47Q5MNV8 452 aa10.14□□□□□ -0.79
PDLIM5-223ENST00000627587 TAF3Q5VWG9 929 aa10.14□□□□□ -0.79
PDLIM5-223ENST00000627587 LRRN4CLQ8ND94 238 aa10.14□□□□□ -0.79
PDLIM5-223ENST00000627587 SECISBP2LQ93073 1101 aaKnown RBP10.14□□□□□ -0.79
PDLIM5-223ENST00000627587 C18orf25Q96B23 403 aaPredicted RBP10.14□□□□□ -0.79
PDLIM5-223ENST00000627587 ZNF689Q96CS4 500 aaPredicted RBP10.14□□□□□ -0.79
PDLIM5-223ENST00000627587 ZSWIM1Q9BR11 485 aa10.14□□□□□ -0.79
PDLIM5-223ENST00000627587 BCO2Q9BYV7 579 aa10.14□□□□□ -0.79
PDLIM5-223ENST00000627587 NIF3L1Q9GZT8 377 aa10.14□□□□□ -0.79
PDLIM5-223ENST00000627587 ISCUQ9H1K1 167 aa10.14□□□□□ -0.79
PDLIM5-223ENST00000627587 VRTNQ9H8Y1 702 aa10.14□□□□□ -0.79
PDLIM5-223ENST00000627587 ERVK-5Q9HDB9 667 aa10.14□□□□□ -0.79
PDLIM5-223ENST00000627587 SEPT11Q9NVA2 429 aaKnown RBP10.14□□□□□ -0.79
PDLIM5-223ENST00000627587 TUBGCP4Q9UGJ1 667 aa10.14□□□□□ -0.79
PDLIM5-223ENST00000627587 METRNQ9UJH8 293 aa10.14□□□□□ -0.79
PDLIM5-223ENST00000627587 TMCO5BA8MYB1 307 aa10.13□□□□□ -0.79
PDLIM5-223ENST00000627587 BUB1O43683 1085 aa10.13□□□□□ -0.79
PDLIM5-223ENST00000627587 POLR2BP30876 1174 aaKnown RBP10.13□□□□□ -0.79
PDLIM5-223ENST00000627587 GALCP54803 685 aa10.13□□□□□ -0.79
PDLIM5-223ENST00000627587 BPIFB4P59827 614 aa10.13□□□□□ -0.79
PDLIM5-223ENST00000627587 CDR2Q01850 454 aa10.13□□□□□ -0.79
PDLIM5-223ENST00000627587 LPIN1Q14693 890 aa10.13□□□□□ -0.79
PDLIM5-223ENST00000627587 GLRA4Q5JXX5 417 aa10.13□□□□□ -0.79
PDLIM5-223ENST00000627587 TWF2Q6IBS0 349 aaKnown RBP10.13□□□□□ -0.79
PDLIM5-223ENST00000627587 CMTR2Q8IYT2 770 aaKnown RBP10.13□□□□□ -0.79
PDLIM5-223ENST00000627587 GSTCDQ8NEC7 633 aa10.13□□□□□ -0.79
PDLIM5-223ENST00000627587 MYRIPQ8NFW9 859 aa10.13□□□□□ -0.79
PDLIM5-223ENST00000627587 SLC39A7Q92504 469 aa10.13□□□□□ -0.79
PDLIM5-223ENST00000627587 TAF4BQ92750 862 aa10.13□□□□□ -0.79
PDLIM5-223ENST00000627587 KIF12Q96FN5 646 aa10.13□□□□□ -0.79
PDLIM5-223ENST00000627587 DPP3Q9NY33 737 aa10.13□□□□□ -0.79
PDLIM5-223ENST00000627587 KLK14Q9P0G3 267 aa10.13□□□□□ -0.79
PDLIM5-223ENST00000627587 DERAQ9Y315 318 aa10.13□□□□□ -0.79
PDLIM5-223ENST00000627587 XIRP2A4UGR9 3374 aa10.13□□□□□ -0.79
PDLIM5-223ENST00000627587 ENC1O14682 589 aa10.13□□□□□ -0.79
PDLIM5-223ENST00000627587 PTGESO14684 152 aa10.13□□□□□ -0.79
PDLIM5-223ENST00000627587 MBTPS2O43462 519 aa10.13□□□□□ -0.79
PDLIM5-223ENST00000627587 DGKIO75912 1065 aa10.13□□□□□ -0.79
PDLIM5-223ENST00000627587 ATP1A1P05023 1023 aaKnown RBP10.13□□□□□ -0.79
PDLIM5-223ENST00000627587 WEE2P0C1S8 567 aa10.13□□□□□ -0.79
PDLIM5-223ENST00000627587 C7P10643 843 aa10.13□□□□□ -0.79
PDLIM5-223ENST00000627587 GHRP10912 638 aa10.13□□□□□ -0.79
PDLIM5-223ENST00000627587 CD52P31358 61 aa10.13□□□□□ -0.79
PDLIM5-223ENST00000627587 LTBRP36941 435 aa10.13□□□□□ -0.79
PDLIM5-223ENST00000627587 RAP1GAPP47736 663 aa10.13□□□□□ -0.79
PDLIM5-223ENST00000627587 AFF1P51825 1210 aaKnown RBP10.13□□□□□ -0.79
PDLIM5-223ENST00000627587 SOX4Q06945 474 aaPredicted RBP10.13□□□□□ -0.79
PDLIM5-223ENST00000627587 HYAL1Q12794 435 aa10.13□□□□□ -0.79
PDLIM5-223ENST00000627587 NFX1Q12986 1120 aaKnown RBP10.13□□□□□ -0.79
PDLIM5-223ENST00000627587 ADAM15Q13444 863 aa10.13□□□□□ -0.79
PDLIM5-223ENST00000627587 SMAD4Q13485 552 aaKnown RBP10.13□□□□□ -0.79
PDLIM5-223ENST00000627587 DSC3Q14574 896 aa10.13□□□□□ -0.79
PDLIM5-223ENST00000627587 TMEM270Q6UE05 265 aa10.13□□□□□ -0.79
PDLIM5-223ENST00000627587 SCARA5Q6ZMJ2 495 aa10.13□□□□□ -0.79
PDLIM5-223ENST00000627587 RBBP8NLQ8NC74 664 aaPredicted RBP10.13□□□□□ -0.79
PDLIM5-223ENST00000627587 TRIM58Q8NG06 486 aa10.13□□□□□ -0.79
PDLIM5-223ENST00000627587 WHAMMQ8TF30 809 aa10.13□□□□□ -0.79
PDLIM5-223ENST00000627587 ARHGEF26Q96DR7 871 aa10.13□□□□□ -0.79
PDLIM5-223ENST00000627587 APOL6Q9BWW8 343 aa10.13□□□□□ -0.79
PDLIM5-223ENST00000627587 RC3H2Q9HBD1 1191 aaKnown RBP10.13□□□□□ -0.79
PDLIM5-223ENST00000627587 CISHQ9NSE2 258 aa10.13□□□□□ -0.79
PDLIM5-223ENST00000627587 ITGA11Q9UKX5 1188 aa10.13□□□□□ -0.79
PDLIM5-223ENST00000627587 INTUQ9ULD6 942 aa10.13□□□□□ -0.79
PDLIM5-223ENST00000627587 PADI3Q9ULW8 664 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 254.2 ms