RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 RAB20Q9NX57 234 aa15.77■□□□□ 0.12
PNKP-221ENST00000627317 GDAP2Q9NXN4 497 aa15.77■□□□□ 0.12
PNKP-221ENST00000627317 MUTYHQ9UIF7 546 aa15.77■□□□□ 0.12
PNKP-221ENST00000627317 TIMM13Q9Y5L4 95 aaPredicted RBP15.77■□□□□ 0.12
PNKP-221ENST00000627317 PLXNA3P51805 1871 aa15.77■□□□□ 0.11
PNKP-221ENST00000627317 DENND4AQ7Z401 1863 aa15.76■□□□□ 0.11
PNKP-221ENST00000627317 H7C4K7 107 aa15.76■□□□□ 0.11
PNKP-221ENST00000627317 PMM2O15305 246 aa15.76■□□□□ 0.11
PNKP-221ENST00000627317 ADAM12O43184 909 aa15.76■□□□□ 0.11
PNKP-221ENST00000627317 GPR37L1O60883 481 aa15.76■□□□□ 0.11
PNKP-221ENST00000627317 ZNF18P17022 549 aa15.76■□□□□ 0.11
PNKP-221ENST00000627317 MTHFRP42898 656 aa15.76■□□□□ 0.11
PNKP-221ENST00000627317 VWA3BQ502W6 1294 aa15.76■□□□□ 0.11
PNKP-221ENST00000627317 WSCD1Q658N2 575 aa15.76■□□□□ 0.11
PNKP-221ENST00000627317 OVOS1Q6IE37 1185 aa15.76■□□□□ 0.11
PNKP-221ENST00000627317 CES5AQ6NT32 575 aa15.76■□□□□ 0.11
PNKP-221ENST00000627317 SCARA5Q6ZMJ2 495 aa15.76■□□□□ 0.11
PNKP-221ENST00000627317 ADGRF2Q8IZF7 708 aa15.76■□□□□ 0.11
PNKP-221ENST00000627317 TMEM86AQ8N2M4 240 aa15.76■□□□□ 0.11
PNKP-221ENST00000627317 TOP6BLQ8N6T0 577 aa15.76■□□□□ 0.11
PNKP-221ENST00000627317 HDAC7Q8WUI4 952 aa15.76■□□□□ 0.11
PNKP-221ENST00000627317 SEMA4DQ92854 862 aa15.76■□□□□ 0.11
PNKP-221ENST00000627317 ZNF707Q96C28 371 aaPredicted RBP15.76■□□□□ 0.11
PNKP-221ENST00000627317 RPGRIP1Q96KN7 1286 aa15.76■□□□□ 0.11
PNKP-221ENST00000627317 RIPOR3Q96MK2 946 aa15.76■□□□□ 0.11
PNKP-221ENST00000627317 NDST4Q9H3R1 872 aa15.76■□□□□ 0.11
PNKP-221ENST00000627317 GCNT4Q9P109 453 aa15.76■□□□□ 0.11
PNKP-221ENST00000627317 L1RE1Q9UN81 338 aa15.76■□□□□ 0.11
PNKP-221ENST00000627317 COQ4Q9Y3A0 265 aa15.76■□□□□ 0.11
PNKP-221ENST00000627317 TSC2P49815 1807 aa15.75■□□□□ 0.11
PNKP-221ENST00000627317 CYP11A1P05108 521 aa15.75■□□□□ 0.11
PNKP-221ENST00000627317 ALADP13716 330 aa15.75■□□□□ 0.11
PNKP-221ENST00000627317 CTXN3Q4LDR2 81 aa15.75■□□□□ 0.11
PNKP-221ENST00000627317 SPOPLQ6IQ16 392 aa15.75■□□□□ 0.11
PNKP-221ENST00000627317 RSPO2Q6UXX9 243 aaPredicted RBP15.75■□□□□ 0.11
PNKP-221ENST00000627317 PDCL2Q8N4E4 241 aa15.75■□□□□ 0.11
PNKP-221ENST00000627317 ELMO3Q96BJ8 720 aa15.75■□□□□ 0.11
PNKP-221ENST00000627317 ANP32EQ9BTT0 268 aa15.75■□□□□ 0.11
PNKP-221ENST00000627317 NIF3L1Q9GZT8 377 aa15.75■□□□□ 0.11
PNKP-221ENST00000627317 VPS16Q9H269 839 aa15.75■□□□□ 0.11
PNKP-221ENST00000627317 HSD3B7Q9H2F3 369 aa15.75■□□□□ 0.11
PNKP-221ENST00000627317 MTRRQ9UBK8 725 aa15.75■□□□□ 0.11
PNKP-221ENST00000627317 FBXW11Q9UKB1 542 aa15.75■□□□□ 0.11
PNKP-221ENST00000627317 POLIQ9UNA4 740 aa15.75■□□□□ 0.11
PNKP-221ENST00000627317 FAM86C2PA6NEL3 165 aa15.74■□□□□ 0.11
PNKP-221ENST00000627317 C2CD4DB7Z1M9 353 aa15.74■□□□□ 0.11
PNKP-221ENST00000627317 TBC1D4O60343 1298 aa15.74■□□□□ 0.11
PNKP-221ENST00000627317 RFPL2O75678 378 aa15.74■□□□□ 0.11
PNKP-221ENST00000627317 ATP1A3P13637 1013 aa15.74■□□□□ 0.11
PNKP-221ENST00000627317 COPB1P53618 953 aaKnown RBP15.74■□□□□ 0.11
PNKP-221ENST00000627317 MIIPQ5JXC2 388 aa15.74■□□□□ 0.11
PNKP-221ENST00000627317 GBP6Q6ZN66 633 aa15.74■□□□□ 0.11
PNKP-221ENST00000627317 DPH6Q7L8W6 267 aa15.74■□□□□ 0.11
PNKP-221ENST00000627317 PALB2Q86YC2 1186 aa15.74■□□□□ 0.11
PNKP-221ENST00000627317 GLYCTKQ8IVS8 523 aa15.74■□□□□ 0.11
PNKP-221ENST00000627317 THEM5Q8N1Q8 247 aa15.74■□□□□ 0.11
PNKP-221ENST00000627317 SPATA18Q8TC71 538 aa15.74■□□□□ 0.11
PNKP-221ENST00000627317 NT5C1BQ96P26 610 aa15.74■□□□□ 0.11
PNKP-221ENST00000627317 INTS2Q9H0H0 1204 aaKnown RBP15.74■□□□□ 0.11
PNKP-221ENST00000627317 PLEKHA4Q9H4M7 779 aa15.74■□□□□ 0.11
PNKP-221ENST00000627317 SMYD3Q9H7B4 428 aa15.74■□□□□ 0.11
PNKP-221ENST00000627317 LIMA1Q9UHB6 759 aaKnown RBP15.74■□□□□ 0.11
PNKP-221ENST00000627317 BACE2Q9Y5Z0 518 aa15.74■□□□□ 0.11
PNKP-221ENST00000627317 GTPBP10A4D1E9 387 aaKnown RBP15.73■□□□□ 0.11
PNKP-221ENST00000627317 OR6C75A6NL08 312 aa15.73■□□□□ 0.11
PNKP-221ENST00000627317 OAZ2O95190 189 aa15.73■□□□□ 0.11
PNKP-221ENST00000627317 SPATA31D3P0C874 917 aa15.73■□□□□ 0.11
PNKP-221ENST00000627317 LRMPQ12912 555 aa15.73■□□□□ 0.11
PNKP-221ENST00000627317 RAB33AQ14088 237 aa15.73■□□□□ 0.11
PNKP-221ENST00000627317 MRPL58Q14197 206 aaKnown RBP15.73■□□□□ 0.11
PNKP-221ENST00000627317 EXOC3L4Q17RC7 722 aa15.73■□□□□ 0.11
PNKP-221ENST00000627317 SOWAHAQ2M3V2 549 aa15.73■□□□□ 0.11
PNKP-221ENST00000627317 TMEM31Q5JXX7 168 aa15.73■□□□□ 0.11
PNKP-221ENST00000627317 ATAT1Q5SQI0 421 aa15.73■□□□□ 0.11
PNKP-221ENST00000627317 FKBP15Q5T1M5 1219 aa15.73■□□□□ 0.11
PNKP-221ENST00000627317 CYP26C1Q6V0L0 522 aa15.73■□□□□ 0.11
PNKP-221ENST00000627317 SPATA31D4Q6ZUB0 917 aa15.73■□□□□ 0.11
PNKP-221ENST00000627317 RNF214Q8ND24 703 aa15.73■□□□□ 0.11
PNKP-221ENST00000627317 CRACR2AQ9BSW2 395 aa15.73■□□□□ 0.11
PNKP-221ENST00000627317 LRFN3Q9BTN0 628 aa15.73■□□□□ 0.11
PNKP-221ENST00000627317 OXCT2Q9BYC2 517 aaPredicted RBP15.73■□□□□ 0.11
PNKP-221ENST00000627317 SNX25Q9H3E2 840 aa15.73■□□□□ 0.11
PNKP-221ENST00000627317 APOBEC3GQ9HC16 384 aaKnown RBP15.73■□□□□ 0.11
PNKP-221ENST00000627317 ZDHHC7Q9NXF8 308 aa15.73■□□□□ 0.11
PNKP-221ENST00000627317 FBXL5Q9UKA1 691 aa15.73■□□□□ 0.11
PNKP-221ENST00000627317 USTQ9Y2C2 406 aa15.73■□□□□ 0.11
PNKP-221ENST00000627317 CDY1Q9Y6F8 540 aa15.73■□□□□ 0.11
PNKP-221ENST00000627317 LGALS16A8MUM7 142 aa15.72■□□□□ 0.11
PNKP-221ENST00000627317 LRRN2O75325 713 aa15.72■□□□□ 0.11
PNKP-221ENST00000627317 TACC1O75410 805 aa15.72■□□□□ 0.11
PNKP-221ENST00000627317 CPB1P15086 417 aa15.72■□□□□ 0.11
PNKP-221ENST00000627317 WARSP23381 471 aaKnown RBP15.72■□□□□ 0.11
PNKP-221ENST00000627317 SP100P23497 879 aaPredicted RBP15.72■□□□□ 0.11
PNKP-221ENST00000627317 PCSK1P29120 753 aa15.72■□□□□ 0.11
PNKP-221ENST00000627317 OR1D2P34982 312 aa15.72■□□□□ 0.11
PNKP-221ENST00000627317 ASPAP45381 313 aa15.72■□□□□ 0.11
PNKP-221ENST00000627317 RAP1GAPP47736 663 aa15.72■□□□□ 0.11
PNKP-221ENST00000627317 LHX1P48742 406 aa15.72■□□□□ 0.11
PNKP-221ENST00000627317 ARPP19P56211 112 aa15.72■□□□□ 0.11
PNKP-221ENST00000627317 SLC8B1Q6J4K2 584 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms