RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 HCFC1R1Q9NWW0 138 aa17.95■□□□□ 0.46
UBE3D-208ENST00000626828 IGSF9Q9P2J2 1179 aa17.95■□□□□ 0.46
UBE3D-208ENST00000626828 MRPS23Q9Y3D9 190 aaKnown RBP17.95■□□□□ 0.46
UBE3D-208ENST00000626828 ASB3Q9Y575 518 aa17.95■□□□□ 0.46
UBE3D-208ENST00000626828 DENND4AQ7Z401 1863 aa17.95■□□□□ 0.46
UBE3D-208ENST00000626828 GPR37L1O60883 481 aa17.94■□□□□ 0.46
UBE3D-208ENST00000626828 N4BP1O75113 896 aaKnown RBP17.94■□□□□ 0.46
UBE3D-208ENST00000626828 TACC1O75410 805 aa17.94■□□□□ 0.46
UBE3D-208ENST00000626828 RHOP08100 348 aa17.94■□□□□ 0.46
UBE3D-208ENST00000626828 WARSP23381 471 aaKnown RBP17.94■□□□□ 0.46
UBE3D-208ENST00000626828 GNL1P36915 607 aaPredicted RBP17.94■□□□□ 0.46
UBE3D-208ENST00000626828 TNNC1P63316 161 aa17.94■□□□□ 0.46
UBE3D-208ENST00000626828 ZXDAP98168 799 aa17.94■□□□□ 0.46
UBE3D-208ENST00000626828 NCOA4Q13772 614 aa17.94■□□□□ 0.46
UBE3D-208ENST00000626828 LEMD2Q8NC56 503 aa17.94■□□□□ 0.46
UBE3D-208ENST00000626828 TAF4BQ92750 862 aa17.94■□□□□ 0.46
UBE3D-208ENST00000626828 CORO1BQ9BR76 489 aa17.94■□□□□ 0.46
UBE3D-208ENST00000626828 XYLT2Q9H1B5 865 aa17.94■□□□□ 0.46
UBE3D-208ENST00000626828 SNX25Q9H3E2 840 aa17.94■□□□□ 0.46
UBE3D-208ENST00000626828 CEP72Q9P209 647 aa17.94■□□□□ 0.46
UBE3D-208ENST00000626828 KIAA1468Q9P260 1216 aa17.94■□□□□ 0.46
UBE3D-208ENST00000626828 CDH7Q9ULB5 785 aa17.94■□□□□ 0.46
UBE3D-208ENST00000626828 SORCS3Q9UPU3 1222 aa17.94■□□□□ 0.46
UBE3D-208ENST00000626828 YIPF1Q9Y548 306 aa17.94■□□□□ 0.46
UBE3D-208ENST00000626828 PCDHB5Q9Y5E4 795 aa17.94■□□□□ 0.46
UBE3D-208ENST00000626828 MICAL2O94851 1124 aa17.93■□□□□ 0.46
UBE3D-208ENST00000626828 EPB41P11171 864 aaKnown RBP17.93■□□□□ 0.46
UBE3D-208ENST00000626828 GTF2H1P32780 548 aa17.93■□□□□ 0.46
UBE3D-208ENST00000626828 CAMK4Q16566 473 aa17.93■□□□□ 0.46
UBE3D-208ENST00000626828 ZNF667Q5HYK9 610 aa17.93■□□□□ 0.46
UBE3D-208ENST00000626828 INTS6LQ5JSJ4 861 aaKnown RBP17.93■□□□□ 0.46
UBE3D-208ENST00000626828 C1orf220Q5T0J3 134 aa17.93■□□□□ 0.46
UBE3D-208ENST00000626828 GET4Q7L5D6 327 aaPredicted RBP17.93■□□□□ 0.46
UBE3D-208ENST00000626828 OSTM1Q86WC4 334 aa17.93■□□□□ 0.46
UBE3D-208ENST00000626828 TRIML1Q8N9V2 468 aa17.93■□□□□ 0.46
UBE3D-208ENST00000626828 ITFG1Q8TB96 612 aa17.93■□□□□ 0.46
UBE3D-208ENST00000626828 FGF13Q92913 245 aa17.93■□□□□ 0.46
UBE3D-208ENST00000626828 GBP4Q96PP9 640 aa17.93■□□□□ 0.46
UBE3D-208ENST00000626828 CRISPLD1Q9H336 500 aa17.93■□□□□ 0.46
UBE3D-208ENST00000626828 KCNK12Q9HB15 430 aa17.93■□□□□ 0.46
UBE3D-208ENST00000626828 NXF1Q9UBU9 619 aaKnown RBP17.93■□□□□ 0.46
UBE3D-208ENST00000626828 GTF3C4Q9UKN8 822 aa17.93■□□□□ 0.46
UBE3D-208ENST00000626828 CDH9Q9ULB4 789 aa17.93■□□□□ 0.46
UBE3D-208ENST00000626828 MUC3AQ02505 3323 aa17.92■□□□□ 0.46
UBE3D-208ENST00000626828 PPP1R3GB7ZBB8 358 aa17.92■□□□□ 0.46
UBE3D-208ENST00000626828 BIN1O00499 593 aa17.92■□□□□ 0.46
UBE3D-208ENST00000626828 STX10O60499 249 aa17.92■□□□□ 0.46
UBE3D-208ENST00000626828 VNN1O95497 513 aa17.92■□□□□ 0.46
UBE3D-208ENST00000626828 PDGFRBP09619 1106 aa17.92■□□□□ 0.46
UBE3D-208ENST00000626828 HAPLN1P10915 354 aaPredicted RBP17.92■□□□□ 0.46
UBE3D-208ENST00000626828 P4HA1P13674 534 aa17.92■□□□□ 0.46
UBE3D-208ENST00000626828 BMP6P22004 513 aa17.92■□□□□ 0.46
UBE3D-208ENST00000626828 ACAT1P24752 427 aaKnown RBP17.92■□□□□ 0.46
UBE3D-208ENST00000626828 LMO2P25791 158 aa17.92■□□□□ 0.46
UBE3D-208ENST00000626828 MAPRE1Q15691 268 aaKnown RBP17.92■□□□□ 0.46
UBE3D-208ENST00000626828 ZNF699Q32M78 642 aa17.92■□□□□ 0.46
UBE3D-208ENST00000626828 MGAT5BQ3V5L5 792 aa17.92■□□□□ 0.46
UBE3D-208ENST00000626828 TMEM31Q5JXX7 168 aa17.92■□□□□ 0.46
UBE3D-208ENST00000626828 FAM171BQ6P995 826 aa17.92■□□□□ 0.46
UBE3D-208ENST00000626828 PDZD4Q76G19 769 aaPredicted RBP17.92■□□□□ 0.46
UBE3D-208ENST00000626828 DNAJB7Q7Z6W7 309 aaPredicted RBP17.92■□□□□ 0.46
UBE3D-208ENST00000626828 ITIH5Q86UX2 942 aa17.92■□□□□ 0.46
UBE3D-208ENST00000626828 ZC3H3Q8IXZ2 948 aaKnown RBP17.92■□□□□ 0.46
UBE3D-208ENST00000626828 UBALD2Q8IYN6 164 aa17.92■□□□□ 0.46
UBE3D-208ENST00000626828 KBTBD7Q8WVZ9 684 aa17.92■□□□□ 0.46
UBE3D-208ENST00000626828 EEF2KMTQ96G04 330 aa17.92■□□□□ 0.46
UBE3D-208ENST00000626828 TMLHEQ9NVH6 421 aa17.92■□□□□ 0.46
UBE3D-208ENST00000626828 GDE1Q9NZC3 331 aa17.92■□□□□ 0.46
UBE3D-208ENST00000626828 BICDL2A1A5D9 508 aa17.91■□□□□ 0.46
UBE3D-208ENST00000626828 SLC16A3O15427 465 aaKnown RBP17.91■□□□□ 0.46
UBE3D-208ENST00000626828 ASGR2P07307 311 aa17.91■□□□□ 0.46
UBE3D-208ENST00000626828 CD44P16070 742 aaKnown RBP17.91■□□□□ 0.46
UBE3D-208ENST00000626828 GCLMP48507 274 aa17.91■□□□□ 0.46
UBE3D-208ENST00000626828 PMS1P54277 932 aaKnown RBP17.91■□□□□ 0.46
UBE3D-208ENST00000626828 EPHA5P54756 1037 aa17.91■□□□□ 0.46
UBE3D-208ENST00000626828 PPP3CAQ08209 521 aa17.91■□□□□ 0.46
UBE3D-208ENST00000626828 TDGQ13569 410 aa17.91■□□□□ 0.46
UBE3D-208ENST00000626828 MTMR3Q13615 1198 aa17.91■□□□□ 0.46
UBE3D-208ENST00000626828 FOXR2Q6PJQ5 311 aa17.91■□□□□ 0.46
UBE3D-208ENST00000626828 TRIM67Q6ZTA4 783 aa17.91■□□□□ 0.46
UBE3D-208ENST00000626828 FILIP1Q7Z7B0 1213 aa17.91■□□□□ 0.46
UBE3D-208ENST00000626828 OR6B3Q8NGW1 331 aa17.91■□□□□ 0.46
UBE3D-208ENST00000626828 PKMYT1Q99640 499 aa17.91■□□□□ 0.46
UBE3D-208ENST00000626828 SEPT5Q99719 369 aaPredicted RBP17.91■□□□□ 0.46
UBE3D-208ENST00000626828 ABCB6Q9NP58 842 aa17.91■□□□□ 0.46
UBE3D-208ENST00000626828 ASAH2Q9NR71 780 aa17.91■□□□□ 0.46
UBE3D-208ENST00000626828 LMBRD1Q9NUN5 540 aa17.91■□□□□ 0.46
UBE3D-208ENST00000626828 ABI2Q9NYB9 513 aaPredicted RBP17.91■□□□□ 0.46
UBE3D-208ENST00000626828 TECTAO75443 2155 aa17.91■□□□□ 0.46
UBE3D-208ENST00000626828 TSC2P49815 1807 aa17.91■□□□□ 0.46
UBE3D-208ENST00000626828 MYBPHLA2RUH7 354 aa17.9■□□□□ 0.46
UBE3D-208ENST00000626828 TRIM49BA6NDI0 452 aa17.9■□□□□ 0.46
UBE3D-208ENST00000626828 CLSTN1O94985 981 aa17.9■□□□□ 0.46
UBE3D-208ENST00000626828 HLA-DRAP01903 254 aa17.9■□□□□ 0.46
UBE3D-208ENST00000626828 TRIM49P0CI25 452 aa17.9■□□□□ 0.46
UBE3D-208ENST00000626828 TRIM49CP0CI26 452 aa17.9■□□□□ 0.46
UBE3D-208ENST00000626828 RPL10AP62906 217 aaKnown RBP17.9■□□□□ 0.46
UBE3D-208ENST00000626828 SIGLEC14Q08ET2 396 aa17.9■□□□□ 0.46
UBE3D-208ENST00000626828 VEPH1Q14D04 833 aa17.9■□□□□ 0.46
UBE3D-208ENST00000626828 TAF12Q16514 161 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms