RNA–Protein interactions for RNA: ENST00000624009.3

LINC00963-217, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 663 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-217ENST00000624009 TACC1O75410 805 aa13.36□□□□□ -0.27
LINC00963-217ENST00000624009 ECI2O75521 394 aa13.36□□□□□ -0.27
LINC00963-217ENST00000624009 NR3C1P04150 777 aa13.36□□□□□ -0.27
LINC00963-217ENST00000624009 KRT19P08727 400 aa13.36□□□□□ -0.27
LINC00963-217ENST00000624009 OR4Q2P0C623 313 aa13.36□□□□□ -0.27
LINC00963-217ENST00000624009 DLATP10515 647 aaKnown RBP13.36□□□□□ -0.27
LINC00963-217ENST00000624009 RPL13P26373 211 aaKnown RBP13.36□□□□□ -0.27
LINC00963-217ENST00000624009 WEE1P30291 646 aa13.36□□□□□ -0.27
LINC00963-217ENST00000624009 NTHL1P78549 312 aa13.36□□□□□ -0.27
LINC00963-217ENST00000624009 MAPRE1Q15691 268 aaKnown RBP13.36□□□□□ -0.27
LINC00963-217ENST00000624009 SLC5A9Q2M3M2 681 aa13.36□□□□□ -0.27
LINC00963-217ENST00000624009 CFAP221Q4G0U5 840 aa13.36□□□□□ -0.27
LINC00963-217ENST00000624009 SLC39A12Q504Y0 691 aa13.36□□□□□ -0.27
LINC00963-217ENST00000624009 ATAD1Q8NBU5 361 aa13.36□□□□□ -0.27
LINC00963-217ENST00000624009 ITFG1Q8TB96 612 aa13.36□□□□□ -0.27
LINC00963-217ENST00000624009 TMC2Q8TDI7 906 aa13.36□□□□□ -0.27
LINC00963-217ENST00000624009 PARD3BQ8TEW8 1205 aa13.36□□□□□ -0.27
LINC00963-217ENST00000624009 FUBP3Q96I24 572 aaKnown RBP eCLIP13.36□□□□□ -0.27
LINC00963-217ENST00000624009 CORO1BQ9BR76 489 aa13.36□□□□□ -0.27
LINC00963-217ENST00000624009 LRRC3Q9BY71 257 aa13.36□□□□□ -0.27
LINC00963-217ENST00000624009 GZF1Q9H116 711 aaPredicted RBP13.36□□□□□ -0.27
LINC00963-217ENST00000624009 TRPV4Q9HBA0 871 aa13.36□□□□□ -0.27
LINC00963-217ENST00000624009 GDPD2Q9HCC8 539 aa13.36□□□□□ -0.27
LINC00963-217ENST00000624009 FRMD4BQ9Y2L6 1034 aa13.36□□□□□ -0.27
LINC00963-217ENST00000624009 SNX9Q9Y5X1 595 aa13.36□□□□□ -0.27
LINC00963-217ENST00000624009 NUMBLQ9Y6R0 609 aa13.36□□□□□ -0.27
LINC00963-217ENST00000624009 MIA3Q5JRA6 1907 aa13.36□□□□□ -0.27
LINC00963-217ENST00000624009 ANAPC1Q9H1A4 1944 aa13.36□□□□□ -0.27
LINC00963-217ENST00000624009 VPS13AQ96RL7 3174 aa13.36□□□□□ -0.27
LINC00963-217ENST00000624009 HAPLN1P10915 354 aaPredicted RBP13.35□□□□□ -0.27
LINC00963-217ENST00000624009 CLCN5P51795 746 aa13.35□□□□□ -0.27
LINC00963-217ENST00000624009 BFSP1Q12934 665 aa13.35□□□□□ -0.27
LINC00963-217ENST00000624009 VEPH1Q14D04 833 aa13.35□□□□□ -0.27
LINC00963-217ENST00000624009 SOWAHAQ2M3V2 549 aa13.35□□□□□ -0.27
LINC00963-217ENST00000624009 EDRF1Q3B7T1 1238 aa13.35□□□□□ -0.27
LINC00963-217ENST00000624009 INTS6LQ5JSJ4 861 aaKnown RBP13.35□□□□□ -0.27
LINC00963-217ENST00000624009 ADGRF2Q8IZF7 708 aa13.35□□□□□ -0.27
LINC00963-217ENST00000624009 RDH13Q8NBN7 331 aa13.35□□□□□ -0.27
LINC00963-217ENST00000624009 FGF14Q92915 247 aa13.35□□□□□ -0.27
LINC00963-217ENST00000624009 SYAP1Q96A49 352 aaPredicted RBP13.35□□□□□ -0.27
LINC00963-217ENST00000624009 E2F7Q96AV8 911 aa13.35□□□□□ -0.27
LINC00963-217ENST00000624009 ELSPBP1Q96BH3 223 aa13.35□□□□□ -0.27
LINC00963-217ENST00000624009 PGLYRP2Q96PD5 576 aa13.35□□□□□ -0.27
LINC00963-217ENST00000624009 PKMYT1Q99640 499 aa13.35□□□□□ -0.27
LINC00963-217ENST00000624009 DNAJC25Q9H1X3 360 aa13.35□□□□□ -0.27
LINC00963-217ENST00000624009 CRISPLD1Q9H336 500 aa13.35□□□□□ -0.27
LINC00963-217ENST00000624009 PCDHB5Q9Y5E4 795 aa13.35□□□□□ -0.27
LINC00963-217ENST00000624009 SMC2O95347 1197 aa13.34□□□□□ -0.27
LINC00963-217ENST00000624009 PRR29P0C7W0 189 aa13.34□□□□□ -0.27
LINC00963-217ENST00000624009 WARSP23381 471 aaKnown RBP13.34□□□□□ -0.27
LINC00963-217ENST00000624009 MAGEA11P43364 429 aa13.34□□□□□ -0.27
LINC00963-217ENST00000624009 PFKPQ01813 784 aa13.34□□□□□ -0.27
LINC00963-217ENST00000624009 TRPC3Q13507 836 aa13.34□□□□□ -0.27
LINC00963-217ENST00000624009 ZCWPW2Q504Y3 356 aa13.34□□□□□ -0.27
LINC00963-217ENST00000624009 LMBRD2Q68DH5 695 aaPredicted RBP13.34□□□□□ -0.27
LINC00963-217ENST00000624009 FAM171BQ6P995 826 aa13.34□□□□□ -0.27
LINC00963-217ENST00000624009 PARM1Q6UWI2 310 aa13.34□□□□□ -0.27
LINC00963-217ENST00000624009 INTS8Q75QN2 995 aaKnown RBP13.34□□□□□ -0.27
LINC00963-217ENST00000624009 LRRTM3Q86VH5 581 aa13.34□□□□□ -0.27
LINC00963-217ENST00000624009 TMC8Q8IU68 726 aa13.34□□□□□ -0.27
LINC00963-217ENST00000624009 TAF4BQ92750 862 aa13.34□□□□□ -0.27
LINC00963-217ENST00000624009 CCDC127Q96BQ5 260 aa13.34□□□□□ -0.27
LINC00963-217ENST00000624009 TMEM209Q96SK2 561 aa13.34□□□□□ -0.27
LINC00963-217ENST00000624009 MKNK1Q9BUB5 465 aa13.34□□□□□ -0.27
LINC00963-217ENST00000624009 DDX43Q9NXZ2 648 aaKnown RBP13.34□□□□□ -0.27
LINC00963-217ENST00000624009 CDH9Q9ULB4 789 aa13.34□□□□□ -0.27
LINC00963-217ENST00000624009 MOSPD3O75425 235 aa13.33□□□□□ -0.28
LINC00963-217ENST00000624009 CEBPBP17676 345 aa13.33□□□□□ -0.28
LINC00963-217ENST00000624009 CDC25CP30307 473 aa13.33□□□□□ -0.28
LINC00963-217ENST00000624009 PPP1R2P41236 205 aa13.33□□□□□ -0.28
LINC00963-217ENST00000624009 CCR2P41597 374 aa13.33□□□□□ -0.28
LINC00963-217ENST00000624009 RPL10AP62906 217 aaKnown RBP13.33□□□□□ -0.28
LINC00963-217ENST00000624009 ZACNQ401N2 412 aa13.33□□□□□ -0.28
LINC00963-217ENST00000624009 ZNF658Q5TYW1 1059 aaPredicted RBP13.33□□□□□ -0.28
LINC00963-217ENST00000624009 ASTLQ6HA08 431 aaPredicted RBP13.33□□□□□ -0.28
LINC00963-217ENST00000624009 PHLDB3Q6NSJ2 640 aa13.33□□□□□ -0.28
LINC00963-217ENST00000624009 C4orf50Q6ZRC1 276 aa13.33□□□□□ -0.28
LINC00963-217ENST00000624009 DNAJB7Q7Z6W7 309 aaPredicted RBP13.33□□□□□ -0.28
LINC00963-217ENST00000624009 KBTBD7Q8WVZ9 684 aa13.33□□□□□ -0.28
LINC00963-217ENST00000624009 RSAD2Q8WXG1 361 aa13.33□□□□□ -0.28
LINC00963-217ENST00000624009 ZNF516Q92618 1163 aa13.33□□□□□ -0.28
LINC00963-217ENST00000624009 SMARCD2Q92925 531 aa13.33□□□□□ -0.28
LINC00963-217ENST00000624009 ASB16Q96NS5 453 aa13.33□□□□□ -0.28
LINC00963-217ENST00000624009 XYLT2Q9H1B5 865 aa13.33□□□□□ -0.28
LINC00963-217ENST00000624009 IRF2BPLQ9H1B7 796 aa13.33□□□□□ -0.28
LINC00963-217ENST00000624009 ZFP14Q9HCL3 533 aa13.33□□□□□ -0.28
LINC00963-217ENST00000624009 TRPV5Q9NQA5 729 aa13.33□□□□□ -0.28
LINC00963-217ENST00000624009 FBXL21Q9UKT6 434 aa13.33□□□□□ -0.28
LINC00963-217ENST00000624009 ZFHX2Q9C0A1 2572 aaPredicted RBP13.33□□□□□ -0.28
LINC00963-217ENST00000624009 KIF26AQ9ULI4 1882 aaPredicted RBP13.32□□□□□ -0.28
LINC00963-217ENST00000624009 LRRIQ3A6PVS8 624 aaPredicted RBP13.32□□□□□ -0.28
LINC00963-217ENST00000624009 CST3P01034 146 aaPredicted RBP13.32□□□□□ -0.28
LINC00963-217ENST00000624009 C4BPAP04003 597 aaKnown RBP13.32□□□□□ -0.28
LINC00963-217ENST00000624009 CSH1P0DML2 217 aa13.32□□□□□ -0.28
LINC00963-217ENST00000624009 CSH2P0DML3 217 aa13.32□□□□□ -0.28
LINC00963-217ENST00000624009 ATF6P18850 670 aa13.32□□□□□ -0.28
LINC00963-217ENST00000624009 NR2F2P24468 414 aa13.32□□□□□ -0.28
LINC00963-217ENST00000624009 AVPR2P30518 371 aa13.32□□□□□ -0.28
LINC00963-217ENST00000624009 PSMC2P35998 433 aaKnown RBP13.32□□□□□ -0.28
LINC00963-217ENST00000624009 TNNC1P63316 161 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms