RNA–Protein interactions for RNA: ENST00000623185.3

LINC00963-216, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 786 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-216ENST00000623185 TPGS2Q68CL5 300 aa13.3□□□□□ -0.28
LINC00963-216ENST00000623185 LILRA6Q6PI73 481 aa13.3□□□□□ -0.28
LINC00963-216ENST00000623185 RSPO2Q6UXX9 243 aaPredicted RBP13.3□□□□□ -0.28
LINC00963-216ENST00000623185 OSTM1Q86WC4 334 aa13.3□□□□□ -0.28
LINC00963-216ENST00000623185 AUTS2Q8WXX7 1259 aa13.3□□□□□ -0.28
LINC00963-216ENST00000623185 TMEM176AQ96HP8 235 aa13.3□□□□□ -0.28
LINC00963-216ENST00000623185 GAS2L1Q99501 681 aaPredicted RBP13.3□□□□□ -0.28
LINC00963-216ENST00000623185 LSM14BQ9BX40 385 aaKnown RBP13.3□□□□□ -0.28
LINC00963-216ENST00000623185 NT5C1AQ9BXI3 368 aa13.3□□□□□ -0.28
LINC00963-216ENST00000623185 GANQ9H2C0 597 aa13.3□□□□□ -0.28
LINC00963-216ENST00000623185 FAM207AQ9NSI2 230 aaPredicted RBP13.3□□□□□ -0.28
LINC00963-216ENST00000623185 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.3□□□□□ -0.28
LINC00963-216ENST00000623185 MTCH2Q9Y6C9 303 aa13.3□□□□□ -0.28
LINC00963-216ENST00000623185 SCN1AP35498 2009 aa13.3□□□□□ -0.28
LINC00963-216ENST00000623185 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.29□□□□□ -0.28
LINC00963-216ENST00000623185 FSD2A1L4K1 749 aa13.29□□□□□ -0.28
LINC00963-216ENST00000623185 FOXN3O00409 490 aaPredicted RBP13.29□□□□□ -0.28
LINC00963-216ENST00000623185 NCK2O43639 380 aa13.29□□□□□ -0.28
LINC00963-216ENST00000623185 PAEPP09466 180 aa13.29□□□□□ -0.28
LINC00963-216ENST00000623185 RAP1GAPP47736 663 aa13.29□□□□□ -0.28
LINC00963-216ENST00000623185 KLK7P49862 253 aa13.29□□□□□ -0.28
LINC00963-216ENST00000623185 POLR2FP61218 127 aaKnown RBP13.29□□□□□ -0.28
LINC00963-216ENST00000623185 TSPY1Q01534 308 aa13.29□□□□□ -0.28
LINC00963-216ENST00000623185 APBA1Q02410 837 aa13.29□□□□□ -0.28
LINC00963-216ENST00000623185 ADGRE1Q14246 886 aa13.29□□□□□ -0.28
LINC00963-216ENST00000623185 NFE2Q16621 373 aaPredicted RBP13.29□□□□□ -0.28
LINC00963-216ENST00000623185 IQCEQ6IPM2 695 aa13.29□□□□□ -0.28
LINC00963-216ENST00000623185 GJB7Q6PEY0 223 aa13.29□□□□□ -0.28
LINC00963-216ENST00000623185 SCARA5Q6ZMJ2 495 aa13.29□□□□□ -0.28
LINC00963-216ENST00000623185 RTL10Q7L3V2 364 aa13.29□□□□□ -0.28
LINC00963-216ENST00000623185 LRRTM3Q86VH5 581 aa13.29□□□□□ -0.28
LINC00963-216ENST00000623185 DEFB123Q8N688 67 aa13.29□□□□□ -0.28
LINC00963-216ENST00000623185 OR10T2Q8NGX3 314 aa13.29□□□□□ -0.28
LINC00963-216ENST00000623185 C2orf15Q8WU43 125 aaKnown RBP13.29□□□□□ -0.28
LINC00963-216ENST00000623185 HDAC7Q8WUI4 952 aa13.29□□□□□ -0.28
LINC00963-216ENST00000623185 SHC3Q92529 594 aa13.29□□□□□ -0.28
LINC00963-216ENST00000623185 KAT5Q92993 513 aa13.29□□□□□ -0.28
LINC00963-216ENST00000623185 MRFAP1L1Q96HT8 127 aa13.29□□□□□ -0.28
LINC00963-216ENST00000623185 CDX2Q99626 313 aaPredicted RBP13.29□□□□□ -0.28
LINC00963-216ENST00000623185 PKMYT1Q99640 499 aa13.29□□□□□ -0.28
LINC00963-216ENST00000623185 ARID3AQ99856 593 aa13.29□□□□□ -0.28
LINC00963-216ENST00000623185 NSUN3Q9H649 340 aaKnown RBP13.29□□□□□ -0.28
LINC00963-216ENST00000623185 TLE6Q9H808 572 aa13.29□□□□□ -0.28
LINC00963-216ENST00000623185 MTMR10Q9NXD2 777 aa13.29□□□□□ -0.28
LINC00963-216ENST00000623185 CEP72Q9P209 647 aa13.29□□□□□ -0.28
LINC00963-216ENST00000623185 HSFX1Q9UBD0 423 aa13.29□□□□□ -0.28
LINC00963-216ENST00000623185 DPP7Q9UHL4 492 aa13.29□□□□□ -0.28
LINC00963-216ENST00000623185 MYO6Q9UM54 1294 aa13.29□□□□□ -0.28
LINC00963-216ENST00000623185 PCDHB4Q9Y5E5 795 aa13.29□□□□□ -0.28
LINC00963-216ENST00000623185 CDY1Q9Y6F8 540 aa13.29□□□□□ -0.28
LINC00963-216ENST00000623185 ITIH6Q6UXX5 1313 aa13.29□□□□□ -0.28
LINC00963-216ENST00000623185 GBF1Q92538 1859 aa13.29□□□□□ -0.28
LINC00963-216ENST00000623185 LAMA2P24043 3122 aaKnown RBP13.28□□□□□ -0.28
LINC00963-216ENST00000623185 GOLGA6L3A6NEY3 463 aa13.28□□□□□ -0.28
LINC00963-216ENST00000623185 RNF225M0QZC1 329 aaPredicted RBP13.28□□□□□ -0.28
LINC00963-216ENST00000623185 ADAM12O43184 909 aa13.28□□□□□ -0.28
LINC00963-216ENST00000623185 CLASP2O75122 1294 aaKnown RBP13.28□□□□□ -0.28
LINC00963-216ENST00000623185 ATF2P15336 505 aa13.28□□□□□ -0.28
LINC00963-216ENST00000623185 RPL17P18621 184 aaKnown RBP13.28□□□□□ -0.28
LINC00963-216ENST00000623185 CD58P19256 250 aa13.28□□□□□ -0.28
LINC00963-216ENST00000623185 RAD23BP54727 409 aa13.28□□□□□ -0.28
LINC00963-216ENST00000623185 BPIFB4P59827 614 aa13.28□□□□□ -0.28
LINC00963-216ENST00000623185 DRAP1Q14919 205 aaPredicted RBP13.28□□□□□ -0.28
LINC00963-216ENST00000623185 DUSP6Q16828 381 aa13.28□□□□□ -0.28
LINC00963-216ENST00000623185 ARHGAP44Q17R89 818 aa13.28□□□□□ -0.28
LINC00963-216ENST00000623185 INTS6LQ5JSJ4 861 aaKnown RBP13.28□□□□□ -0.28
LINC00963-216ENST00000623185 SPECC1LQ69YQ0 1117 aa13.28□□□□□ -0.28
LINC00963-216ENST00000623185 TMEM270Q6UE05 265 aa13.28□□□□□ -0.28
LINC00963-216ENST00000623185 TMEM184AQ6ZMB5 413 aa13.28□□□□□ -0.28
LINC00963-216ENST00000623185 FMNL3Q8IVF7 1028 aa13.28□□□□□ -0.28
LINC00963-216ENST00000623185 FAM71AQ8IYT1 594 aa13.28□□□□□ -0.28
LINC00963-216ENST00000623185 B3GALNT2Q8NCR0 500 aa13.28□□□□□ -0.28
LINC00963-216ENST00000623185 MYCBPAPQ8TBZ2 947 aa13.28□□□□□ -0.28
LINC00963-216ENST00000623185 SLC22A17Q8WUG5 538 aa13.28□□□□□ -0.28
LINC00963-216ENST00000623185 HEXIM2Q96MH2 286 aaKnown RBP13.28□□□□□ -0.28
LINC00963-216ENST00000623185 FAM161BQ96MY7 647 aa13.28□□□□□ -0.28
LINC00963-216ENST00000623185 SYT15Q9BQS2 421 aa13.28□□□□□ -0.28
LINC00963-216ENST00000623185 AFF4Q9UHB7 1163 aaKnown RBP13.28□□□□□ -0.28
LINC00963-216ENST00000623185 GTF3C4Q9UKN8 822 aa13.28□□□□□ -0.28
LINC00963-216ENST00000623185 NME7Q9Y5B8 376 aa13.28□□□□□ -0.28
LINC00963-216ENST00000623185 FHOD1Q9Y613 1164 aa13.28□□□□□ -0.28
LINC00963-216ENST00000623185 A0A1W2PQJ5 194 aa13.27□□□□□ -0.29
LINC00963-216ENST00000623185 MYBPHLA2RUH7 354 aa13.27□□□□□ -0.29
LINC00963-216ENST00000623185 EPHB6O15197 1021 aa13.27□□□□□ -0.29
LINC00963-216ENST00000623185 ATP2C2O75185 946 aa13.27□□□□□ -0.29
LINC00963-216ENST00000623185 VDRP11473 427 aa13.27□□□□□ -0.29
LINC00963-216ENST00000623185 IGFBP4P22692 258 aa13.27□□□□□ -0.29
LINC00963-216ENST00000623185 ACAT1P24752 427 aaKnown RBP13.27□□□□□ -0.29
LINC00963-216ENST00000623185 CA8P35219 290 aa13.27□□□□□ -0.29
LINC00963-216ENST00000623185 CLCN4P51793 760 aa13.27□□□□□ -0.29
LINC00963-216ENST00000623185 ZNF75DP51815 510 aa13.27□□□□□ -0.29
LINC00963-216ENST00000623185 JAM2P57087 298 aa13.27□□□□□ -0.29
LINC00963-216ENST00000623185 ROR1Q01973 937 aa13.27□□□□□ -0.29
LINC00963-216ENST00000623185 KCNC3Q14003 757 aa13.27□□□□□ -0.29
LINC00963-216ENST00000623185 CACNA2D4Q7Z3S7 1137 aa13.27□□□□□ -0.29
LINC00963-216ENST00000623185 ACOT1Q86TX2 421 aa13.27□□□□□ -0.29
LINC00963-216ENST00000623185 PALB2Q86YC2 1186 aa13.27□□□□□ -0.29
LINC00963-216ENST00000623185 VSTM4Q8IW00 320 aa13.27□□□□□ -0.29
LINC00963-216ENST00000623185 SLC4A11Q8NBS3 891 aa13.27□□□□□ -0.29
LINC00963-216ENST00000623185 FUBP3Q96I24 572 aaKnown RBP eCLIP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms