RNA–Protein interactions for RNA: ENST00000622493.4

CLTCL1-212, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2 BASIC

Gene CLTCL1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-212ENST00000622493 ABL1P00519 1130 aa15.12■□□□□ 0.01
CLTCL1-212ENST00000622493 BRD2P25440 801 aaKnown RBP15.12■□□□□ 0.01
CLTCL1-212ENST00000622493 NSFP46459 744 aaKnown RBP15.12■□□□□ 0.01
CLTCL1-212ENST00000622493 TMEM35BQ8NCS4 154 aa15.12■□□□□ 0.01
CLTCL1-212ENST00000622493 TFAP2BQ92481 460 aa15.12■□□□□ 0.01
CLTCL1-212ENST00000622493 CYFIP2Q96F07 1278 aa15.12■□□□□ 0.01
CLTCL1-212ENST00000622493 TRIM11Q96F44 468 aa15.12■□□□□ 0.01
CLTCL1-212ENST00000622493 TNIP3Q96KP6 325 aa15.12■□□□□ 0.01
CLTCL1-212ENST00000622493 IL23AQ9NPF7 189 aa15.12■□□□□ 0.01
CLTCL1-212ENST00000622493 CACNG4Q9UBN1 327 aa15.12■□□□□ 0.01
CLTCL1-212ENST00000622493 TRIM10Q9UDY6 481 aa15.12■□□□□ 0.01
CLTCL1-212ENST00000622493 TFR2Q9UP52 801 aa15.12■□□□□ 0.01
CLTCL1-212ENST00000622493 DUSP10Q9Y6W6 482 aa15.12■□□□□ 0.01
CLTCL1-212ENST00000622493 CALCAP01258 141 aa15.12■□□□□ 0.01
CLTCL1-212ENST00000622493 AMHP03971 560 aa15.12■□□□□ 0.01
CLTCL1-212ENST00000622493 CYP11A1P05108 521 aa15.12■□□□□ 0.01
CLTCL1-212ENST00000622493 ODC1P11926 461 aa15.12■□□□□ 0.01
CLTCL1-212ENST00000622493 CDH5P33151 784 aaPredicted RBP15.12■□□□□ 0.01
CLTCL1-212ENST00000622493 GNG11P61952 73 aa15.12■□□□□ 0.01
CLTCL1-212ENST00000622493 NOMO3P69849 1222 aa15.12■□□□□ 0.01
CLTCL1-212ENST00000622493 GPC5P78333 572 aa15.12■□□□□ 0.01
CLTCL1-212ENST00000622493 PPIGQ13427 754 aaKnown RBP eCLIP15.12■□□□□ 0.01
CLTCL1-212ENST00000622493 IFI16Q16666 785 aaKnown RBP15.12■□□□□ 0.01
CLTCL1-212ENST00000622493 TIGD5Q53EQ6 642 aa15.12■□□□□ 0.01
CLTCL1-212ENST00000622493 CD300LGQ6UXG3 332 aa15.12■□□□□ 0.01
CLTCL1-212ENST00000622493 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.12■□□□□ 0.01
CLTCL1-212ENST00000622493 LRRC43Q8N309 656 aa15.12■□□□□ 0.01
CLTCL1-212ENST00000622493 TOP1MTQ969P6 601 aa15.12■□□□□ 0.01
CLTCL1-212ENST00000622493 VCPIP1Q96JH7 1222 aa15.12■□□□□ 0.01
CLTCL1-212ENST00000622493 ZSWIM1Q9BR11 485 aa15.12■□□□□ 0.01
CLTCL1-212ENST00000622493 TMEM175Q9BSA9 504 aa15.12■□□□□ 0.01
CLTCL1-212ENST00000622493 MACROD2A1Z1Q3 448 aa15.11■□□□□ 0.01
CLTCL1-212ENST00000622493 TRAPPC3O43617 180 aa15.11■□□□□ 0.01
CLTCL1-212ENST00000622493 DGKIO75912 1065 aa15.11■□□□□ 0.01
CLTCL1-212ENST00000622493 ALDH2P05091 517 aa15.11■□□□□ 0.01
CLTCL1-212ENST00000622493 MYBL1P10243 752 aa15.11■□□□□ 0.01
CLTCL1-212ENST00000622493 OR1G1P47890 313 aa15.11■□□□□ 0.01
CLTCL1-212ENST00000622493 TCEAL1Q15170 157 aa15.11■□□□□ 0.01
CLTCL1-212ENST00000622493 WSCD1Q658N2 575 aa15.11■□□□□ 0.01
CLTCL1-212ENST00000622493 LCLAT1Q6UWP7 414 aa15.11■□□□□ 0.01
CLTCL1-212ENST00000622493 TRIM58Q8NG06 486 aa15.11■□□□□ 0.01
CLTCL1-212ENST00000622493 SUSD3Q96L08 255 aa15.11■□□□□ 0.01
CLTCL1-212ENST00000622493 NOX5Q96PH1 765 aa15.11■□□□□ 0.01
CLTCL1-212ENST00000622493 IRX2Q9BZI1 471 aaPredicted RBP15.11■□□□□ 0.01
CLTCL1-212ENST00000622493 NRDE2Q9H7Z3 1164 aa15.11■□□□□ 0.01
CLTCL1-212ENST00000622493 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.11■□□□□ 0.01
CLTCL1-212ENST00000622493 TBKBP1A7MCY6 615 aa15.1■□□□□ 0.01
CLTCL1-212ENST00000622493 O00370 1275 aa15.1■□□□□ 0.01
CLTCL1-212ENST00000622493 CAPN15O75808 1086 aa15.1■□□□□ 0.01
CLTCL1-212ENST00000622493 KIF4AO95239 1232 aa15.1■□□□□ 0.01
CLTCL1-212ENST00000622493 TYMPP19971 482 aa15.1■□□□□ 0.01
CLTCL1-212ENST00000622493 ABCB4P21439 1286 aa15.1■□□□□ 0.01
CLTCL1-212ENST00000622493 ORC1Q13415 861 aa15.1■□□□□ 0.01
CLTCL1-212ENST00000622493 ZNF569Q5MCW4 686 aa15.1■□□□□ 0.01
CLTCL1-212ENST00000622493 NAA35Q5VZE5 725 aa15.1■□□□□ 0.01
CLTCL1-212ENST00000622493 ARHGAP17Q68EM7 881 aa15.1■□□□□ 0.01
CLTCL1-212ENST00000622493 ACOT1Q86TX2 421 aa15.1■□□□□ 0.01
CLTCL1-212ENST00000622493 METTL23Q86XA0 190 aa15.1■□□□□ 0.01
CLTCL1-212ENST00000622493 PHF13Q86YI8 300 aaPredicted RBP15.1■□□□□ 0.01
CLTCL1-212ENST00000622493 RHOT2Q8IXI1 618 aa15.1■□□□□ 0.01
CLTCL1-212ENST00000622493 KIF18AQ8NI77 898 aa15.1■□□□□ 0.01
CLTCL1-212ENST00000622493 RFFLQ8WZ73 363 aa15.1■□□□□ 0.01
CLTCL1-212ENST00000622493 RABGGTAQ92696 567 aa15.1■□□□□ 0.01
CLTCL1-212ENST00000622493 ALS2CR12Q96Q35 445 aa15.1■□□□□ 0.01
CLTCL1-212ENST00000622493 THAP2Q9H0W7 228 aa15.1■□□□□ 0.01
CLTCL1-212ENST00000622493 GTF3C4Q9UKN8 822 aa15.1■□□□□ 0.01
CLTCL1-212ENST00000622493 FNDC1Q4ZHG4 1894 aaPredicted RBP15.1■□□□□ 0.01
CLTCL1-212ENST00000622493 B4GALT3O60512 393 aa15.09■□□□□ 0.01
CLTCL1-212ENST00000622493 CFHP08603 1231 aa15.09■□□□□ 0.01
CLTCL1-212ENST00000622493 IGFBP6P24592 240 aaPredicted RBP15.09■□□□□ 0.01
CLTCL1-212ENST00000622493 LMO2P25791 158 aa15.09■□□□□ 0.01
CLTCL1-212ENST00000622493 BRCC3P46736 316 aa15.09■□□□□ 0.01
CLTCL1-212ENST00000622493 C1QBPQ07021 282 aaKnown RBP15.09■□□□□ 0.01
CLTCL1-212ENST00000622493 SYT10Q6XYQ8 523 aa15.09■□□□□ 0.01
CLTCL1-212ENST00000622493 PASD1Q8IV76 773 aa15.09■□□□□ 0.01
CLTCL1-212ENST00000622493 MCOLN2Q8IZK6 566 aa15.09■□□□□ 0.01
CLTCL1-212ENST00000622493 CPA5Q8WXQ8 436 aa15.09■□□□□ 0.01
CLTCL1-212ENST00000622493 HTATIP2Q9BUP3 242 aa15.09■□□□□ 0.01
CLTCL1-212ENST00000622493 COLEC11Q9BWP8 271 aa15.09■□□□□ 0.01
CLTCL1-212ENST00000622493 DDX43Q9NXZ2 648 aaKnown RBP15.09■□□□□ 0.01
CLTCL1-212ENST00000622493 DNAJB4Q9UDY4 337 aa15.09■□□□□ 0.01
CLTCL1-212ENST00000622493 DNAI1Q9UI46 699 aa15.09■□□□□ 0.01
CLTCL1-212ENST00000622493 SALL4Q9UJQ4 1053 aa15.09■□□□□ 0.01
CLTCL1-212ENST00000622493 PAXBP1Q9Y5B6 917 aa15.09■□□□□ 0.01
CLTCL1-212ENST00000622493 NME7Q9Y5B8 376 aa15.09■□□□□ 0.01
CLTCL1-212ENST00000622493 MKI67P46013 3256 aaKnown RBP15.09■□□□□ 0.01
CLTCL1-212ENST00000622493 NCANO14594 1321 aa15.09■□□□□ 0.01
CLTCL1-212ENST00000622493 CARNS1A5YM72 827 aa15.09■□□□□ 0.01
CLTCL1-212ENST00000622493 NRP1O14786 923 aa15.09■□□□□ 0.01
CLTCL1-212ENST00000622493 TADA2AO75478 443 aa15.09■□□□□ 0.01
CLTCL1-212ENST00000622493 UPP2O95045 317 aa15.09■□□□□ 0.01
CLTCL1-212ENST00000622493 PDGFRBP09619 1106 aa15.09■□□□□ 0.01
CLTCL1-212ENST00000622493 MMP8P22894 467 aa15.09■□□□□ 0.01
CLTCL1-212ENST00000622493 PCSK1P29120 753 aa15.09■□□□□ 0.01
CLTCL1-212ENST00000622493 HADHBP55084 474 aaKnown RBP15.09■□□□□ 0.01
CLTCL1-212ENST00000622493 NAP1L1P55209 391 aaKnown RBP15.09■□□□□ 0.01
CLTCL1-212ENST00000622493 WDR5P61964 334 aaKnown RBP15.09■□□□□ 0.01
CLTCL1-212ENST00000622493 FPGSQ05932 587 aa15.09■□□□□ 0.01
CLTCL1-212ENST00000622493 PAN2Q504Q3 1202 aaKnown RBP15.09■□□□□ 0.01
CLTCL1-212ENST00000622493 MON1BQ7L1V2 547 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms