RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 POLR3FQ9H1D9 316 aaPredicted RBP16.6■□□□□ 0.25
NPHP4-211ENST00000622020 ZFATQ9P243 1243 aa16.6■□□□□ 0.25
NPHP4-211ENST00000622020 TJP2Q9UDY2 1190 aa16.6■□□□□ 0.25
NPHP4-211ENST00000622020 TYROBPO43914 113 aa16.6■□□□□ 0.25
NPHP4-211ENST00000622020 ACO1P21399 889 aaKnown RBP16.6■□□□□ 0.25
NPHP4-211ENST00000622020 CCDC15Q0P6D6 951 aa16.6■□□□□ 0.25
NPHP4-211ENST00000622020 NR1H3Q13133 447 aa16.6■□□□□ 0.25
NPHP4-211ENST00000622020 SPOCD1Q6ZMY3 1216 aa16.6■□□□□ 0.25
NPHP4-211ENST00000622020 CLNKQ7Z7G1 428 aa16.6■□□□□ 0.25
NPHP4-211ENST00000622020 ARMC2Q8NEN0 867 aa16.6■□□□□ 0.25
NPHP4-211ENST00000622020 UCMAQ8WVF2 138 aa16.6■□□□□ 0.25
NPHP4-211ENST00000622020 ZNF606Q8WXB4 792 aa16.6■□□□□ 0.25
NPHP4-211ENST00000622020 TARS2Q9BW92 718 aaKnown RBP16.6■□□□□ 0.25
NPHP4-211ENST00000622020 HAPLN2Q9GZV7 340 aa16.6■□□□□ 0.25
NPHP4-211ENST00000622020 ST6GALNAC4Q9H4F1 302 aa16.6■□□□□ 0.25
NPHP4-211ENST00000622020 PSMC3IPQ9P2W1 217 aaPredicted RBP16.6■□□□□ 0.25
NPHP4-211ENST00000622020 PCSK1NQ9UHG2 260 aa16.6■□□□□ 0.25
NPHP4-211ENST00000622020 AGO2Q9UKV8 859 aaKnown RBP16.6■□□□□ 0.25
NPHP4-211ENST00000622020 SPDYE2BA6NHP3 402 aa16.59■□□□□ 0.25
NPHP4-211ENST00000622020 PMM2O15305 246 aa16.59■□□□□ 0.25
NPHP4-211ENST00000622020 SPDYE6P0CI01 402 aa16.59■□□□□ 0.25
NPHP4-211ENST00000622020 SERPINB3P29508 390 aa16.59■□□□□ 0.25
NPHP4-211ENST00000622020 BASP1P80723 227 aaKnown RBP16.59■□□□□ 0.25
NPHP4-211ENST00000622020 ZACNQ401N2 412 aa16.59■□□□□ 0.25
NPHP4-211ENST00000622020 FYB2Q5VWT5 728 aa16.59■□□□□ 0.25
NPHP4-211ENST00000622020 PALM2Q8IXS6 379 aa16.59■□□□□ 0.25
NPHP4-211ENST00000622020 NLGN1Q8N2Q7 840 aa16.59■□□□□ 0.25
NPHP4-211ENST00000622020 TMEM130Q8N3G9 435 aa16.59■□□□□ 0.25
NPHP4-211ENST00000622020 FBXO36Q8NEA4 188 aa16.59■□□□□ 0.25
NPHP4-211ENST00000622020 SPDYE1Q8NFV5 336 aaPredicted RBP16.59■□□□□ 0.25
NPHP4-211ENST00000622020 TRIM11Q96F44 468 aa16.59■□□□□ 0.25
NPHP4-211ENST00000622020 ZNF668Q96K58 619 aaPredicted RBP16.59■□□□□ 0.25
NPHP4-211ENST00000622020 FBXL18Q96ME1 805 aa16.59■□□□□ 0.25
NPHP4-211ENST00000622020 PAFAH2Q99487 392 aa16.59■□□□□ 0.25
NPHP4-211ENST00000622020 MRIQ9BWK5 157 aa16.59■□□□□ 0.25
NPHP4-211ENST00000622020 XPNPEP1Q9NQW7 623 aa16.59■□□□□ 0.25
NPHP4-211ENST00000622020 PARVAQ9NVD7 372 aa16.59■□□□□ 0.25
NPHP4-211ENST00000622020 RBAKQ9NYW8 714 aaPredicted RBP16.59■□□□□ 0.25
NPHP4-211ENST00000622020 CHMP2BQ9UQN3 213 aa16.59■□□□□ 0.25
NPHP4-211ENST00000622020 RIPK3Q9Y572 518 aa16.59■□□□□ 0.25
NPHP4-211ENST00000622020 CLUHO75153 1309 aa16.59■□□□□ 0.25
NPHP4-211ENST00000622020 ATP2A1O14983 1001 aa16.59■□□□□ 0.25
NPHP4-211ENST00000622020 KRT36O76013 467 aa16.59■□□□□ 0.25
NPHP4-211ENST00000622020 CST3P01034 146 aaPredicted RBP16.59■□□□□ 0.25
NPHP4-211ENST00000622020 WEE2P0C1S8 567 aa16.59■□□□□ 0.25
NPHP4-211ENST00000622020 EAPPQ56P03 285 aaPredicted RBP16.59■□□□□ 0.25
NPHP4-211ENST00000622020 RNASEH2BQ5TBB1 312 aaKnown RBP16.59■□□□□ 0.25
NPHP4-211ENST00000622020 CADM1Q9BY67 442 aaKnown RBP16.59■□□□□ 0.25
NPHP4-211ENST00000622020 KANSL3Q9P2N6 904 aa16.59■□□□□ 0.25
NPHP4-211ENST00000622020 SMG5Q9UPR3 1016 aaKnown RBP16.59■□□□□ 0.25
NPHP4-211ENST00000622020 PCDHA10Q9Y5I2 948 aa16.59■□□□□ 0.25
NPHP4-211ENST00000622020 LTBP1Q14766 1721 aa16.59■□□□□ 0.25
NPHP4-211ENST00000622020 PRPF4O43172 522 aaKnown RBP eCLIP16.59■□□□□ 0.25
NPHP4-211ENST00000622020 MAP3K6O95382 1288 aa16.59■□□□□ 0.25
NPHP4-211ENST00000622020 C4BPAP04003 597 aaKnown RBP16.59■□□□□ 0.25
NPHP4-211ENST00000622020 CD48P09326 243 aa16.59■□□□□ 0.25
NPHP4-211ENST00000622020 PTGER2P43116 358 aa16.59■□□□□ 0.25
NPHP4-211ENST00000622020 HIRAP54198 1017 aaPredicted RBP16.59■□□□□ 0.25
NPHP4-211ENST00000622020 GEMIN4P57678 1058 aaKnown RBP16.59■□□□□ 0.25
NPHP4-211ENST00000622020 BAATQ14032 418 aaPredicted RBP16.59■□□□□ 0.25
NPHP4-211ENST00000622020 KPNB1Q14974 876 aaKnown RBP16.59■□□□□ 0.25
NPHP4-211ENST00000622020 RCN1Q15293 331 aa16.59■□□□□ 0.25
NPHP4-211ENST00000622020 PARP6Q2NL67 630 aa16.59■□□□□ 0.25
NPHP4-211ENST00000622020 ZBTB33Q86T24 672 aa16.59■□□□□ 0.25
NPHP4-211ENST00000622020 ACTL9Q8TC94 416 aa16.59■□□□□ 0.25
NPHP4-211ENST00000622020 PDCD2LQ9BRP1 358 aa16.59■□□□□ 0.25
NPHP4-211ENST00000622020 RBBP6Q7Z6E9 1792 aaKnown RBP16.59■□□□□ 0.25
NPHP4-211ENST00000622020 ATP4AP20648 1035 aa16.58■□□□□ 0.24
NPHP4-211ENST00000622020 BPIFB4P59827 614 aa16.58■□□□□ 0.24
NPHP4-211ENST00000622020 OTUD4Q01804 1114 aaKnown RBP16.58■□□□□ 0.24
NPHP4-211ENST00000622020 PLEKHA7Q6IQ23 1121 aa16.58■□□□□ 0.24
NPHP4-211ENST00000622020 DNAJC24Q6P3W2 148 aa16.58■□□□□ 0.24
NPHP4-211ENST00000622020 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.58■□□□□ 0.24
NPHP4-211ENST00000622020 RCOR2Q8IZ40 523 aa16.58■□□□□ 0.24
NPHP4-211ENST00000622020 EMC1Q8N766 993 aa16.58■□□□□ 0.24
NPHP4-211ENST00000622020 DNAJC9Q8WXX5 260 aa16.58■□□□□ 0.24
NPHP4-211ENST00000622020 FAM111AQ96PZ2 611 aa16.58■□□□□ 0.24
NPHP4-211ENST00000622020 SYT15Q9BQS2 421 aa16.58■□□□□ 0.24
NPHP4-211ENST00000622020 PIDD1Q9HB75 910 aa16.58■□□□□ 0.24
NPHP4-211ENST00000622020 RABGEF1Q9UJ41 708 aa16.58■□□□□ 0.24
NPHP4-211ENST00000622020 H0YIN7 160 aa16.58■□□□□ 0.24
NPHP4-211ENST00000622020 MAGEB2O15479 319 aa16.58■□□□□ 0.24
NPHP4-211ENST00000622020 CST8O60676 142 aa16.58■□□□□ 0.24
NPHP4-211ENST00000622020 AVILO75366 819 aa16.58■□□□□ 0.24
NPHP4-211ENST00000622020 MARK3P27448 753 aa16.58■□□□□ 0.24
NPHP4-211ENST00000622020 GCLCP48506 637 aaPredicted RBP16.58■□□□□ 0.24
NPHP4-211ENST00000622020 TMEM154Q6P9G4 183 aa16.58■□□□□ 0.24
NPHP4-211ENST00000622020 ENOSF1Q7L5Y1 443 aa16.58■□□□□ 0.24
NPHP4-211ENST00000622020 CCDC60Q8IWA6 550 aaPredicted RBP16.58■□□□□ 0.24
NPHP4-211ENST00000622020 ZNF483Q8TF39 744 aaPredicted RBP16.58■□□□□ 0.24
NPHP4-211ENST00000622020 MOV10L1Q9BXT6 1211 aaKnown RBP16.58■□□□□ 0.24
NPHP4-211ENST00000622020 DLGAP2Q9P1A6 1054 aa16.58■□□□□ 0.24
NPHP4-211ENST00000622020 FBXO40Q9UH90 709 aa16.58■□□□□ 0.24
NPHP4-211ENST00000622020 IP6K2Q9UHH9 426 aa16.58■□□□□ 0.24
NPHP4-211ENST00000622020 ALOX15BO15296 676 aa16.57■□□□□ 0.24
NPHP4-211ENST00000622020 GYG2O15488 501 aa16.57■□□□□ 0.24
NPHP4-211ENST00000622020 ATP5HO75947 161 aa16.57■□□□□ 0.24
NPHP4-211ENST00000622020 FAM155BO75949 473 aa16.57■□□□□ 0.24
NPHP4-211ENST00000622020 ABHD2P08910 425 aa16.57■□□□□ 0.24
NPHP4-211ENST00000622020 KITP10721 976 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms