RNA–Protein interactions for RNA: ENST00000620507.4

RBFOX1-223, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-223ENST00000620507 EP400NLQ6ZTU2 488 aa9.69□□□□□ -0.86
RBFOX1-223ENST00000620507 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.69□□□□□ -0.86
RBFOX1-223ENST00000620507 RIOX2Q8IUF8 465 aa9.69□□□□□ -0.86
RBFOX1-223ENST00000620507 KATNAL2Q8IYT4 538 aa9.69□□□□□ -0.86
RBFOX1-223ENST00000620507 UBA3Q8TBC4 463 aa9.69□□□□□ -0.86
RBFOX1-223ENST00000620507 ART4Q93070 314 aa9.69□□□□□ -0.86
RBFOX1-223ENST00000620507 HPDLQ96IR7 371 aa9.69□□□□□ -0.86
RBFOX1-223ENST00000620507 TEPSINQ96N21 525 aa9.69□□□□□ -0.86
RBFOX1-223ENST00000620507 TMEM121Q9BTD3 319 aa9.69□□□□□ -0.86
RBFOX1-223ENST00000620507 SENP1Q9P0U3 644 aa9.69□□□□□ -0.86
RBFOX1-223ENST00000620507 USP15Q9Y4E8 981 aaPredicted RBP9.69□□□□□ -0.86
RBFOX1-223ENST00000620507 SNX9Q9Y5X1 595 aa9.69□□□□□ -0.86
RBFOX1-223ENST00000620507 ADGRA3Q8IWK6 1321 aa9.69□□□□□ -0.86
RBFOX1-223ENST00000620507 FAM47DPA6NHR8 397 aa9.69□□□□□ -0.86
RBFOX1-223ENST00000620507 CCT8L1PA6NM43 557 aa9.69□□□□□ -0.86
RBFOX1-223ENST00000620507 F8VP50 259 aa9.69□□□□□ -0.86
RBFOX1-223ENST00000620507 GRAP2O75791 330 aa9.69□□□□□ -0.86
RBFOX1-223ENST00000620507 DDNO94850 711 aaPredicted RBP9.69□□□□□ -0.86
RBFOX1-223ENST00000620507 CPP00450 1065 aa9.69□□□□□ -0.86
RBFOX1-223ENST00000620507 C4BPAP04003 597 aaKnown RBP9.69□□□□□ -0.86
RBFOX1-223ENST00000620507 RGS7P49802 495 aa9.69□□□□□ -0.86
RBFOX1-223ENST00000620507 SLC26A2P50443 739 aa9.69□□□□□ -0.86
RBFOX1-223ENST00000620507 PEX5P50542 639 aa9.69□□□□□ -0.86
RBFOX1-223ENST00000620507 ROR1Q01973 937 aa9.69□□□□□ -0.86
RBFOX1-223ENST00000620507 PTK6Q13882 451 aa9.69□□□□□ -0.86
RBFOX1-223ENST00000620507 CCDC62Q6P9F0 684 aa9.69□□□□□ -0.86
RBFOX1-223ENST00000620507 C1orf228Q6PIY5 440 aa9.69□□□□□ -0.86
RBFOX1-223ENST00000620507 SPATA21Q7Z572 469 aa9.69□□□□□ -0.86
RBFOX1-223ENST00000620507 GPC2Q8N158 579 aa9.69□□□□□ -0.86
RBFOX1-223ENST00000620507 C4orf33Q8N1A6 199 aa9.69□□□□□ -0.86
RBFOX1-223ENST00000620507 NME8Q8N427 588 aa9.69□□□□□ -0.86
RBFOX1-223ENST00000620507 EMC1Q8N766 993 aa9.69□□□□□ -0.86
RBFOX1-223ENST00000620507 SPATA18Q8TC71 538 aa9.69□□□□□ -0.86
RBFOX1-223ENST00000620507 RNF34Q969K3 372 aa9.69□□□□□ -0.86
RBFOX1-223ENST00000620507 SGSM3Q96HU1 749 aa9.69□□□□□ -0.86
RBFOX1-223ENST00000620507 TSNARE1Q96NA8 513 aa9.69□□□□□ -0.86
RBFOX1-223ENST00000620507 MED10Q9BTT4 135 aa9.69□□□□□ -0.86
RBFOX1-223ENST00000620507 KLC2Q9H0B6 622 aa9.69□□□□□ -0.86
RBFOX1-223ENST00000620507 DHX33Q9H6R0 707 aaKnown RBP9.69□□□□□ -0.86
RBFOX1-223ENST00000620507 KLC4Q9NSK0 619 aa9.69□□□□□ -0.86
RBFOX1-223ENST00000620507 IQANK1A0A1B0GTG1 560 aa9.69□□□□□ -0.86
RBFOX1-223ENST00000620507 ACKR2O00590 384 aa9.69□□□□□ -0.86
RBFOX1-223ENST00000620507 MAFO75444 373 aaPredicted RBP9.69□□□□□ -0.86
RBFOX1-223ENST00000620507 GH1P01241 217 aa9.69□□□□□ -0.86
RBFOX1-223ENST00000620507 ARL4AP40617 200 aa9.69□□□□□ -0.86
RBFOX1-223ENST00000620507 RAP1GAPP47736 663 aa9.69□□□□□ -0.86
RBFOX1-223ENST00000620507 RPL7AP62424 266 aaKnown RBP9.69□□□□□ -0.86
RBFOX1-223ENST00000620507 KYAT1Q16773 422 aa9.69□□□□□ -0.86
RBFOX1-223ENST00000620507 ATP13A4Q4VNC1 1196 aa9.69□□□□□ -0.86
RBFOX1-223ENST00000620507 ZBTB41Q5SVQ8 909 aa9.69□□□□□ -0.86
RBFOX1-223ENST00000620507 TRPM8Q7Z2W7 1104 aa9.69□□□□□ -0.86
RBFOX1-223ENST00000620507 CPNE8Q86YQ8 564 aa9.69□□□□□ -0.86
RBFOX1-223ENST00000620507 SREK1Q8WXA9 508 aaKnown RBP9.69□□□□□ -0.86
RBFOX1-223ENST00000620507 MCUR1Q96AQ8 359 aa9.69□□□□□ -0.86
RBFOX1-223ENST00000620507 CFAP36Q96G28 342 aa9.69□□□□□ -0.86
RBFOX1-223ENST00000620507 RSRC1Q96IZ7 334 aaKnown RBP9.69□□□□□ -0.86
RBFOX1-223ENST00000620507 FBXL18Q96ME1 805 aa9.69□□□□□ -0.86
RBFOX1-223ENST00000620507 RAB3IPQ96QF0 476 aaPredicted RBP9.69□□□□□ -0.86
RBFOX1-223ENST00000620507 STRA6Q9BX79 667 aa9.69□□□□□ -0.86
RBFOX1-223ENST00000620507 ASCC2Q9H1I8 757 aaPredicted RBP9.69□□□□□ -0.86
RBFOX1-223ENST00000620507 DCDC2CA8MYV0 355 aa9.68□□□□□ -0.86
RBFOX1-223ENST00000620507 M0QZ92 97 aa9.68□□□□□ -0.86
RBFOX1-223ENST00000620507 NFKBIEO00221 500 aa9.68□□□□□ -0.86
RBFOX1-223ENST00000620507 PEX10O60683 326 aa9.68□□□□□ -0.86
RBFOX1-223ENST00000620507 PHF13Q86YI8 300 aaPredicted RBP9.68□□□□□ -0.86
RBFOX1-223ENST00000620507 PIK3R5Q8WYR1 880 aa9.68□□□□□ -0.86
RBFOX1-223ENST00000620507 ADARB2Q9NS39 739 aaKnown RBP9.68□□□□□ -0.86
RBFOX1-223ENST00000620507 SEPT10Q9P0V9 454 aa9.68□□□□□ -0.86
RBFOX1-223ENST00000620507 DNPEPQ9ULA0 475 aa9.68□□□□□ -0.86
RBFOX1-223ENST00000620507 ARL2BPQ9Y2Y0 163 aa9.68□□□□□ -0.86
RBFOX1-223ENST00000620507 ZNF831Q5JPB2 1677 aa9.68□□□□□ -0.86
RBFOX1-223ENST00000620507 SRRM3A6NNA2 597 aaPredicted RBP9.68□□□□□ -0.86
RBFOX1-223ENST00000620507 IRF6O14896 467 aa9.68□□□□□ -0.86
RBFOX1-223ENST00000620507 CHUKO15111 745 aa9.68□□□□□ -0.86
RBFOX1-223ENST00000620507 STAG3L1P0CL83 205 aa9.68□□□□□ -0.86
RBFOX1-223ENST00000620507 CDH8P55286 799 aa9.68□□□□□ -0.86
RBFOX1-223ENST00000620507 COPS2P61201 443 aa9.68□□□□□ -0.86
RBFOX1-223ENST00000620507 LAMC2Q13753 1193 aa9.68□□□□□ -0.86
RBFOX1-223ENST00000620507 SYCP2LQ5T4T6 812 aa9.68□□□□□ -0.86
RBFOX1-223ENST00000620507 C3orf62Q6ZUJ4 267 aa9.68□□□□□ -0.86
RBFOX1-223ENST00000620507 VPS52Q8N1B4 723 aa9.68□□□□□ -0.86
RBFOX1-223ENST00000620507 CCNYQ8ND76 341 aa9.68□□□□□ -0.86
RBFOX1-223ENST00000620507 BEST2Q8NFU1 509 aa9.68□□□□□ -0.86
RBFOX1-223ENST00000620507 CCDC110Q8TBZ0 833 aa9.68□□□□□ -0.86
RBFOX1-223ENST00000620507 ATP2A3Q93084 1043 aa9.68□□□□□ -0.86
RBFOX1-223ENST00000620507 NT5C1AQ9BXI3 368 aa9.68□□□□□ -0.86
RBFOX1-223ENST00000620507 PPME1Q9Y570 386 aa9.68□□□□□ -0.86
RBFOX1-223ENST00000620507 MAFBQ9Y5Q3 323 aaPredicted RBP9.68□□□□□ -0.86
RBFOX1-223ENST00000620507 A8MXQ7 604 aa9.68□□□□□ -0.86
RBFOX1-223ENST00000620507 FARP2O94887 1054 aaPredicted RBP9.68□□□□□ -0.86
RBFOX1-223ENST00000620507 EIF4BP23588 611 aaKnown RBP9.68□□□□□ -0.86
RBFOX1-223ENST00000620507 PTGIRP43119 386 aa9.68□□□□□ -0.86
RBFOX1-223ENST00000620507 TAS2R40P59535 323 aa9.68□□□□□ -0.86
RBFOX1-223ENST00000620507 OTUD4Q01804 1114 aaKnown RBP9.68□□□□□ -0.86
RBFOX1-223ENST00000620507 AUHQ13825 339 aaKnown RBP9.68□□□□□ -0.86
RBFOX1-223ENST00000620507 Q3C1V9 767 aa9.68□□□□□ -0.86
RBFOX1-223ENST00000620507 SLC39A4Q6P5W5 647 aa9.68□□□□□ -0.86
RBFOX1-223ENST00000620507 RIBC1Q8N443 379 aaPredicted RBP9.68□□□□□ -0.86
RBFOX1-223ENST00000620507 ACTL9Q8TC94 416 aa9.68□□□□□ -0.86
RBFOX1-223ENST00000620507 GRAMD1AQ96CP6 724 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms