RNA–Protein interactions for RNA: ENST00000620277.4

DKC1-213, Transcript of dyskerin pseudouridine synthase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DKC1, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-213ENST00000620277 HEY2Q9UBP5 337 aa16.9■□□□□ 0.3
DKC1-213ENST00000620277 T-ENOLP0DO92 83 aa16.9■□□□□ 0.3
DKC1-213ENST00000620277 KLRC2P26717 231 aa16.9■□□□□ 0.3
DKC1-213ENST00000620277 ALDH3A1P30838 453 aa16.9■□□□□ 0.3
DKC1-213ENST00000620277 YWHAGP61981 247 aaKnown RBP eCLIP16.9■□□□□ 0.3
DKC1-213ENST00000620277 OTUD4Q01804 1114 aaKnown RBP16.9■□□□□ 0.3
DKC1-213ENST00000620277 NCOA4Q13772 614 aa16.9■□□□□ 0.3
DKC1-213ENST00000620277 SGSM1Q2NKQ1 1148 aa16.9■□□□□ 0.3
DKC1-213ENST00000620277 ISLR2Q6UXK2 745 aa16.9■□□□□ 0.3
DKC1-213ENST00000620277 DSTYKQ6XUX3 929 aa16.9■□□□□ 0.3
DKC1-213ENST00000620277 GBP7Q8N8V2 638 aaPredicted RBP16.9■□□□□ 0.3
DKC1-213ENST00000620277 FBXO36Q8NEA4 188 aa16.9■□□□□ 0.3
DKC1-213ENST00000620277 ASAP3Q8TDY4 903 aa16.9■□□□□ 0.3
DKC1-213ENST00000620277 SLITRK1Q96PX8 696 aa16.9■□□□□ 0.3
DKC1-213ENST00000620277 FAM111AQ96PZ2 611 aa16.9■□□□□ 0.3
DKC1-213ENST00000620277 DENND2DQ9H6A0 471 aaPredicted RBP16.9■□□□□ 0.3
DKC1-213ENST00000620277 RNF19AQ9NV58 838 aa16.9■□□□□ 0.3
DKC1-213ENST00000620277 PIH1D1Q9NWS0 290 aaKnown RBP16.9■□□□□ 0.3
DKC1-213ENST00000620277 DNALI1O14645 258 aaPredicted RBP16.89■□□□□ 0.29
DKC1-213ENST00000620277 PTGER2P43116 358 aa16.89■□□□□ 0.29
DKC1-213ENST00000620277 GPX6P59796 221 aa16.89■□□□□ 0.29
DKC1-213ENST00000620277 ZNF252P-AS1Q0IIN9 211 aa16.89■□□□□ 0.29
DKC1-213ENST00000620277 MMRN1Q13201 1228 aa16.89■□□□□ 0.29
DKC1-213ENST00000620277 HIF1AQ16665 826 aa16.89■□□□□ 0.29
DKC1-213ENST00000620277 ASRGL1Q7L266 308 aa16.89■□□□□ 0.29
DKC1-213ENST00000620277 USP37Q86T82 979 aa16.89■□□□□ 0.29
DKC1-213ENST00000620277 JOSD2Q8TAC2 188 aa16.89■□□□□ 0.29
DKC1-213ENST00000620277 RSAD2Q8WXG1 361 aa16.89■□□□□ 0.29
DKC1-213ENST00000620277 CFAP36Q96G28 342 aa16.89■□□□□ 0.29
DKC1-213ENST00000620277 SLC5A4Q9NY91 659 aa16.89■□□□□ 0.29
DKC1-213ENST00000620277 NR2E3Q9Y5X4 410 aa16.89■□□□□ 0.29
DKC1-213ENST00000620277 USH1CQ9Y6N9 552 aa16.89■□□□□ 0.29
DKC1-213ENST00000620277 EME2A4GXA9 379 aaPredicted RBP16.89■□□□□ 0.29
DKC1-213ENST00000620277 ASNSP08243 561 aa16.89■□□□□ 0.29
DKC1-213ENST00000620277 RFC1P35251 1148 aaPredicted RBP16.89■□□□□ 0.29
DKC1-213ENST00000620277 TUBP50607 506 aa16.89■□□□□ 0.29
DKC1-213ENST00000620277 MYBPC2Q14324 1141 aa16.89■□□□□ 0.29
DKC1-213ENST00000620277 SPOCD1Q6ZMY3 1216 aa16.89■□□□□ 0.29
DKC1-213ENST00000620277 ZCCHC9Q8N567 271 aaKnown RBP16.89■□□□□ 0.29
DKC1-213ENST00000620277 SHCBP1LQ9BZQ2 653 aa16.89■□□□□ 0.29
DKC1-213ENST00000620277 MRPL47Q9HD33 250 aaKnown RBP16.89■□□□□ 0.29
DKC1-213ENST00000620277 COQ4Q9Y3A0 265 aa16.89■□□□□ 0.29
DKC1-213ENST00000620277 GLRA2P23416 452 aa16.88■□□□□ 0.29
DKC1-213ENST00000620277 PSMA2P25787 234 aa16.88■□□□□ 0.29
DKC1-213ENST00000620277 CRYMQ14894 314 aa16.88■□□□□ 0.29
DKC1-213ENST00000620277 KHDC1Q4VXA5 237 aaKnown RBP16.88■□□□□ 0.29
DKC1-213ENST00000620277 CEP120Q8N960 986 aa16.88■□□□□ 0.29
DKC1-213ENST00000620277 MAIP1Q8WWC4 291 aa16.88■□□□□ 0.29
DKC1-213ENST00000620277 NAF1Q96HR8 494 aaKnown RBP16.88■□□□□ 0.29
DKC1-213ENST00000620277 CYP26B1Q9NR63 512 aa16.88■□□□□ 0.29
DKC1-213ENST00000620277 TXLNGQ9NUQ3 528 aa16.88■□□□□ 0.29
DKC1-213ENST00000620277 TJP3O95049 919 aa16.88■□□□□ 0.29
DKC1-213ENST00000620277 BGNP21810 368 aa16.88■□□□□ 0.29
DKC1-213ENST00000620277 SERPINB3P29508 390 aa16.88■□□□□ 0.29
DKC1-213ENST00000620277 ACTR2P61160 394 aa16.88■□□□□ 0.29
DKC1-213ENST00000620277 CENPCQ03188 943 aa16.88■□□□□ 0.29
DKC1-213ENST00000620277 ZACNQ401N2 412 aa16.88■□□□□ 0.29
DKC1-213ENST00000620277 SH3PXD2AQ5TCZ1 1133 aa16.88■□□□□ 0.29
DKC1-213ENST00000620277 CENPUQ71F23 418 aa16.88■□□□□ 0.29
DKC1-213ENST00000620277 MCF2L2Q86YR7 1114 aa16.88■□□□□ 0.29
DKC1-213ENST00000620277 UNC45BQ8IWX7 931 aa16.88■□□□□ 0.29
DKC1-213ENST00000620277 LRRC71Q8N4P6 559 aa16.88■□□□□ 0.29
DKC1-213ENST00000620277 TFAP2BQ92481 460 aa16.88■□□□□ 0.29
DKC1-213ENST00000620277 PAFAH2Q99487 392 aa16.88■□□□□ 0.29
DKC1-213ENST00000620277 ARL8BQ9NVJ2 186 aa16.88■□□□□ 0.29
DKC1-213ENST00000620277 MAP3K13O43283 966 aa16.88■□□□□ 0.29
DKC1-213ENST00000620277 TOP3BO95985 862 aaKnown RBP16.88■□□□□ 0.29
DKC1-213ENST00000620277 SLC1A1P43005 524 aa16.88■□□□□ 0.29
DKC1-213ENST00000620277 GCNT1Q02742 428 aa16.88■□□□□ 0.29
DKC1-213ENST00000620277 MUM1Q2TAK8 710 aa16.88■□□□□ 0.29
DKC1-213ENST00000620277 RSBN1LQ6PCB5 846 aaPredicted RBP16.88■□□□□ 0.29
DKC1-213ENST00000620277 C1orf228Q6PIY5 440 aa16.88■□□□□ 0.29
DKC1-213ENST00000620277 RFX6Q8HWS3 928 aa16.88■□□□□ 0.29
DKC1-213ENST00000620277 C12orf56Q8IXR9 622 aa16.88■□□□□ 0.29
DKC1-213ENST00000620277 SLC25A41Q8N5S1 370 aa16.88■□□□□ 0.29
DKC1-213ENST00000620277 SLC7A6OSQ96CW6 309 aaPredicted RBP16.88■□□□□ 0.29
DKC1-213ENST00000620277 CYTH2Q99418 400 aa16.88■□□□□ 0.29
DKC1-213ENST00000620277 PARVAQ9NVD7 372 aa16.88■□□□□ 0.29
DKC1-213ENST00000620277 CNTNAP1P78357 1384 aa16.87■□□□□ 0.29
DKC1-213ENST00000620277 SIPA1L1O43166 1804 aa16.87■□□□□ 0.29
DKC1-213ENST00000620277 HMGCS2P54868 508 aa16.87■□□□□ 0.29
DKC1-213ENST00000620277 NR1H3Q13133 447 aa16.87■□□□□ 0.29
DKC1-213ENST00000620277 BMPR2Q13873 1038 aa16.87■□□□□ 0.29
DKC1-213ENST00000620277 THEMIS2Q5TEJ8 643 aa16.87■□□□□ 0.29
DKC1-213ENST00000620277 SCYL2Q6P3W7 929 aa16.87■□□□□ 0.29
DKC1-213ENST00000620277 DLK2Q6UY11 383 aa16.87■□□□□ 0.29
DKC1-213ENST00000620277 IGDCC3Q8IVU1 814 aa16.87■□□□□ 0.29
DKC1-213ENST00000620277 POLIQ9UNA4 740 aa16.87■□□□□ 0.29
DKC1-213ENST00000620277 ATP8B3O60423 1300 aa16.87■□□□□ 0.29
DKC1-213ENST00000620277 ATP2A1O14983 1001 aa16.87■□□□□ 0.29
DKC1-213ENST00000620277 EDF1O60869 148 aaKnown RBP16.87■□□□□ 0.29
DKC1-213ENST00000620277 KRT36O76013 467 aa16.87■□□□□ 0.29
DKC1-213ENST00000620277 C4BPAP04003 597 aaKnown RBP16.87■□□□□ 0.29
DKC1-213ENST00000620277 ACO1P21399 889 aaKnown RBP16.87■□□□□ 0.29
DKC1-213ENST00000620277 SP2Q02086 613 aa16.87■□□□□ 0.29
DKC1-213ENST00000620277 RIPK1Q13546 671 aa16.87■□□□□ 0.29
DKC1-213ENST00000620277 LRRC36Q1X8D7 754 aa16.87■□□□□ 0.29
DKC1-213ENST00000620277 CRELD2Q6UXH1 353 aaPredicted RBP16.87■□□□□ 0.29
DKC1-213ENST00000620277 SAMD7Q7Z3H4 446 aa16.87■□□□□ 0.29
DKC1-213ENST00000620277 VPS52Q8N1B4 723 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms