RNA–Protein interactions for RNA: ENST00000620219.4

CPSF1-213, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF1, Length 4,462 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-213ENST00000620219 WNT8AQ9H1J5 351 aa16.63■□□□□ 0.25
CPSF1-213ENST00000620219 IP6K2Q9UHH9 426 aa16.63■□□□□ 0.25
CPSF1-213ENST00000620219 TTLL3Q9Y4R7 772 aa16.63■□□□□ 0.25
CPSF1-213ENST00000620219 ZBTB42B2RXF5 422 aa16.62■□□□□ 0.25
CPSF1-213ENST00000620219 FKTNO75072 461 aa16.62■□□□□ 0.25
CPSF1-213ENST00000620219 HOXC6P09630 235 aa16.62■□□□□ 0.25
CPSF1-213ENST00000620219 CRYBB1P53674 252 aaPredicted RBP16.62■□□□□ 0.25
CPSF1-213ENST00000620219 GLB1LQ6UWU2 654 aa16.62■□□□□ 0.25
CPSF1-213ENST00000620219 RHOT1Q8IXI2 618 aa16.62■□□□□ 0.25
CPSF1-213ENST00000620219 CCDC89Q8N998 374 aa16.62■□□□□ 0.25
CPSF1-213ENST00000620219 FEZF2Q8TBJ5 459 aa16.62■□□□□ 0.25
CPSF1-213ENST00000620219 DEFB118Q96PH6 123 aa16.62■□□□□ 0.25
CPSF1-213ENST00000620219 ITGA11Q9UKX5 1188 aa16.62■□□□□ 0.25
CPSF1-213ENST00000620219 CFHP08603 1231 aa16.62■□□□□ 0.25
CPSF1-213ENST00000620219 PLA2G4AP47712 749 aa16.62■□□□□ 0.25
CPSF1-213ENST00000620219 PURAQ00577 322 aaKnown RBP16.62■□□□□ 0.25
CPSF1-213ENST00000620219 DENND1BQ6P3S1 775 aa16.62■□□□□ 0.25
CPSF1-213ENST00000620219 TSPAN16Q9UKR8 245 aa16.62■□□□□ 0.25
CPSF1-213ENST00000620219 KIAA1217Q5T5P2 1943 aa16.62■□□□□ 0.25
CPSF1-213ENST00000620219 SGK1O00141 431 aa16.62■□□□□ 0.25
CPSF1-213ENST00000620219 TTC19Q6DKK2 380 aaPredicted RBP16.62■□□□□ 0.25
CPSF1-213ENST00000620219 TNIP3Q96KP6 325 aa16.62■□□□□ 0.25
CPSF1-213ENST00000620219 COG5Q9UP83 839 aa16.62■□□□□ 0.25
CPSF1-213ENST00000620219 A0A1B0GUA9 196 aa16.62■□□□□ 0.25
CPSF1-213ENST00000620219 B4GALT4O60513 344 aa16.62■□□□□ 0.25
CPSF1-213ENST00000620219 SDC4P31431 198 aa16.62■□□□□ 0.25
CPSF1-213ENST00000620219 GRK4P32298 578 aa16.62■□□□□ 0.25
CPSF1-213ENST00000620219 HPDP32754 393 aaPredicted RBP16.62■□□□□ 0.25
CPSF1-213ENST00000620219 SV2CQ496J9 727 aa16.62■□□□□ 0.25
CPSF1-213ENST00000620219 KIAA1841Q6NSI8 718 aa16.62■□□□□ 0.25
CPSF1-213ENST00000620219 NT5DC3Q86UY8 548 aa16.62■□□□□ 0.25
CPSF1-213ENST00000620219 RSAD2Q8WXG1 361 aa16.62■□□□□ 0.25
CPSF1-213ENST00000620219 SENP6Q9GZR1 1112 aaPredicted RBP16.62■□□□□ 0.25
CPSF1-213ENST00000620219 CREBZFQ9NS37 354 aa16.62■□□□□ 0.25
CPSF1-213ENST00000620219 ATP8A1Q9Y2Q0 1164 aa16.62■□□□□ 0.25
CPSF1-213ENST00000620219 COQ4Q9Y3A0 265 aa16.62■□□□□ 0.25
CPSF1-213ENST00000620219 IPPQ9Y573 584 aa16.62■□□□□ 0.25
CPSF1-213ENST00000620219 CENPFP49454 3210 aa16.62■□□□□ 0.25
CPSF1-213ENST00000620219 PSME4Q14997 1843 aa16.61■□□□□ 0.25
CPSF1-213ENST00000620219 H7C0C1 242 aa16.61■□□□□ 0.25
CPSF1-213ENST00000620219 ATP5OP48047 213 aa16.61■□□□□ 0.25
CPSF1-213ENST00000620219 CDCA2Q69YH5 1023 aaPredicted RBP16.61■□□□□ 0.25
CPSF1-213ENST00000620219 GDF6Q6KF10 455 aaPredicted RBP16.61■□□□□ 0.25
CPSF1-213ENST00000620219 CD302Q8IX05 232 aa16.61■□□□□ 0.25
CPSF1-213ENST00000620219 PIGRP01833 764 aa16.61■□□□□ 0.25
CPSF1-213ENST00000620219 INHAP05111 366 aa16.61■□□□□ 0.25
CPSF1-213ENST00000620219 NME3Q13232 169 aa16.61■□□□□ 0.25
CPSF1-213ENST00000620219 SCARA3Q6AZY7 606 aa16.61■□□□□ 0.25
CPSF1-213ENST00000620219 CCNI2Q6ZMN8 369 aaPredicted RBP16.61■□□□□ 0.25
CPSF1-213ENST00000620219 GPR88Q9GZN0 384 aa16.61■□□□□ 0.25
CPSF1-213ENST00000620219 FAM107BQ9H098 131 aa16.61■□□□□ 0.25
CPSF1-213ENST00000620219 BARX2Q9UMQ3 279 aaPredicted RBP16.61■□□□□ 0.25
CPSF1-213ENST00000620219 KPNA7A9QM74 516 aa16.61■□□□□ 0.25
CPSF1-213ENST00000620219 PPP1R2P3Q6NXS1 205 aa16.61■□□□□ 0.25
CPSF1-213ENST00000620219 ADGRF2Q8IZF7 708 aa16.61■□□□□ 0.25
CPSF1-213ENST00000620219 NACA2Q9H009 215 aa16.61■□□□□ 0.25
CPSF1-213ENST00000620219 SRRDQ9UH36 339 aa16.61■□□□□ 0.25
CPSF1-213ENST00000620219 TTC7AQ9ULT0 858 aaPredicted RBP16.61■□□□□ 0.25
CPSF1-213ENST00000620219 HEY1Q9Y5J3 304 aa16.61■□□□□ 0.25
CPSF1-213ENST00000620219 IGKV6-21A0A0C4DH24 114 aa16.6■□□□□ 0.25
CPSF1-213ENST00000620219 ECEL1O95672 775 aa16.6■□□□□ 0.25
CPSF1-213ENST00000620219 GRM5P41594 1212 aa16.6■□□□□ 0.25
CPSF1-213ENST00000620219 ZNF662Q6ZS27 426 aa16.6■□□□□ 0.25
CPSF1-213ENST00000620219 MAIP1Q8WWC4 291 aa16.6■□□□□ 0.25
CPSF1-213ENST00000620219 TRPV6Q9H1D0 765 aa16.6■□□□□ 0.25
CPSF1-213ENST00000620219 CHRNB2P17787 502 aa16.6■□□□□ 0.25
CPSF1-213ENST00000620219 BSPRYQ5W0U4 402 aa16.6■□□□□ 0.25
CPSF1-213ENST00000620219 CCDC137Q6PK04 289 aaKnown RBP16.6■□□□□ 0.25
CPSF1-213ENST00000620219 ATG4AQ8WYN0 398 aa16.6■□□□□ 0.25
CPSF1-213ENST00000620219 KAT2BQ92831 832 aa16.6■□□□□ 0.25
CPSF1-213ENST00000620219 COL11A1P12107 1806 aaPredicted RBP16.6■□□□□ 0.25
CPSF1-213ENST00000620219 PASKQ96RG2 1323 aa16.6■□□□□ 0.25
CPSF1-213ENST00000620219 CCDC188H7C350 402 aa16.6■□□□□ 0.25
CPSF1-213ENST00000620219 MAP3K6O95382 1288 aa16.6■□□□□ 0.25
CPSF1-213ENST00000620219 KRT10P13645 584 aa16.6■□□□□ 0.25
CPSF1-213ENST00000620219 NME8Q8N427 588 aa16.6■□□□□ 0.25
CPSF1-213ENST00000620219 PGBD4Q96DM1 585 aa16.6■□□□□ 0.25
CPSF1-213ENST00000620219 ZSWIM1Q9BR11 485 aa16.6■□□□□ 0.25
CPSF1-213ENST00000620219 EVPLQ92817 2033 aa16.6■□□□□ 0.25
CPSF1-213ENST00000620219 SMIM28A0A1B0GU29 152 aa16.6■□□□□ 0.25
CPSF1-213ENST00000620219 CCDC130P13994 396 aa16.6■□□□□ 0.25
CPSF1-213ENST00000620219 RPL7AP62424 266 aaKnown RBP16.6■□□□□ 0.25
CPSF1-213ENST00000620219 SLC38A7Q9NVC3 462 aa16.6■□□□□ 0.25
CPSF1-213ENST00000620219 PADI3Q9ULW8 664 aa16.6■□□□□ 0.25
CPSF1-213ENST00000620219 PPEF2O14830 753 aa16.59■□□□□ 0.25
CPSF1-213ENST00000620219 VDRP11473 427 aa16.59■□□□□ 0.25
CPSF1-213ENST00000620219 ATICP31939 592 aa16.59■□□□□ 0.25
CPSF1-213ENST00000620219 CTNNA1P35221 906 aaKnown RBP16.59■□□□□ 0.25
CPSF1-213ENST00000620219 CCL23P55773 120 aa16.59■□□□□ 0.25
CPSF1-213ENST00000620219 SCUBE3Q8IX30 993 aa16.59■□□□□ 0.25
CPSF1-213ENST00000620219 URGCPQ8TCY9 931 aa16.59■□□□□ 0.25
CPSF1-213ENST00000620219 MICAL2O94851 1124 aa16.59■□□□□ 0.25
CPSF1-213ENST00000620219 CAPN2P17655 700 aa16.59■□□□□ 0.25
CPSF1-213ENST00000620219 GGCXP38435 758 aa16.59■□□□□ 0.25
CPSF1-213ENST00000620219 EPHB4P54760 987 aa16.59■□□□□ 0.25
CPSF1-213ENST00000620219 TMEM40Q8WWA1 233 aa16.59■□□□□ 0.25
CPSF1-213ENST00000620219 ALG3Q92685 438 aa16.59■□□□□ 0.25
CPSF1-213ENST00000620219 FAM105AQ9NUU6 356 aa16.59■□□□□ 0.25
CPSF1-213ENST00000620219 L1RE1Q9UN81 338 aa16.59■□□□□ 0.25
CPSF1-213ENST00000620219 CDH6P55285 790 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms