RNA–Protein interactions for RNA: ENST00000619178.1

SNORD3D-201, Transcript of small nucleolar RNA, C/D box 3D, humanhuman

BASIC

Gene SNORD3D, Length 218 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3D-201ENST00000619178 CEP57Q86XR8 500 aa11.75□□□□□ -0.53
SNORD3D-201ENST00000619178 CCDC42Q96M95 316 aa11.75□□□□□ -0.53
SNORD3D-201ENST00000619178 HEXIM2Q96MH2 286 aaKnown RBP11.75□□□□□ -0.53
SNORD3D-201ENST00000619178 NOX5Q96PH1 765 aa11.75□□□□□ -0.53
SNORD3D-201ENST00000619178 HERC2P3Q9BVR0 1158 aa11.75□□□□□ -0.53
SNORD3D-201ENST00000619178 MIS12Q9H081 205 aa11.75□□□□□ -0.53
SNORD3D-201ENST00000619178 MRPL17Q9NRX2 175 aaKnown RBP11.75□□□□□ -0.53
SNORD3D-201ENST00000619178 MARCH5Q9NX47 278 aa11.75□□□□□ -0.53
SNORD3D-201ENST00000619178 MYO9BQ13459 2157 aa11.75□□□□□ -0.53
SNORD3D-201ENST00000619178 LINC01553A4QN01 128 aa11.74□□□□□ -0.53
SNORD3D-201ENST00000619178 NT5C1B-RDH14C9J2C7 533 aa11.74□□□□□ -0.53
SNORD3D-201ENST00000619178 CYP26A1O43174 497 aa11.74□□□□□ -0.53
SNORD3D-201ENST00000619178 THAP12O43422 761 aa11.74□□□□□ -0.53
SNORD3D-201ENST00000619178 AKR1B10O60218 316 aa11.74□□□□□ -0.53
SNORD3D-201ENST00000619178 ACO1P21399 889 aaKnown RBP11.74□□□□□ -0.53
SNORD3D-201ENST00000619178 TNFAIP3P21580 790 aa11.74□□□□□ -0.53
SNORD3D-201ENST00000619178 RAP1GAPP47736 663 aa11.74□□□□□ -0.53
SNORD3D-201ENST00000619178 CDH8P55286 799 aa11.74□□□□□ -0.53
SNORD3D-201ENST00000619178 SMAD3P84022 425 aaKnown RBP11.74□□□□□ -0.53
SNORD3D-201ENST00000619178 SPA17Q15506 151 aa11.74□□□□□ -0.53
SNORD3D-201ENST00000619178 CTXN3Q4LDR2 81 aa11.74□□□□□ -0.53
SNORD3D-201ENST00000619178 ZNF394Q53GI3 561 aa11.74□□□□□ -0.53
SNORD3D-201ENST00000619178 HS1BP3Q53T59 392 aa11.74□□□□□ -0.53
SNORD3D-201ENST00000619178 VARS2Q5ST30 1063 aaKnown RBP11.74□□□□□ -0.53
SNORD3D-201ENST00000619178 C10orf76Q5T2E6 689 aa11.74□□□□□ -0.53
SNORD3D-201ENST00000619178 LRRC8AQ8IWT6 810 aa11.74□□□□□ -0.53
SNORD3D-201ENST00000619178 CRYBG2Q8N1P7 616 aa11.74□□□□□ -0.53
SNORD3D-201ENST00000619178 UBR7Q8N806 425 aa11.74□□□□□ -0.53
SNORD3D-201ENST00000619178 B3GALNT2Q8NCR0 500 aa11.74□□□□□ -0.53
SNORD3D-201ENST00000619178 C2orf15Q8WU43 125 aaKnown RBP11.74□□□□□ -0.53
SNORD3D-201ENST00000619178 PIK3R5Q8WYR1 880 aa11.74□□□□□ -0.53
SNORD3D-201ENST00000619178 RABGGTAQ92696 567 aa11.74□□□□□ -0.53
SNORD3D-201ENST00000619178 ARID3AQ99856 593 aa11.74□□□□□ -0.53
SNORD3D-201ENST00000619178 SYT15Q9BQS2 421 aa11.74□□□□□ -0.53
SNORD3D-201ENST00000619178 MRPL45Q9BRJ2 306 aaKnown RBP11.74□□□□□ -0.53
SNORD3D-201ENST00000619178 ZNF518BQ9C0D4 1074 aa11.74□□□□□ -0.53
SNORD3D-201ENST00000619178 LMAN2LQ9H0V9 348 aa11.74□□□□□ -0.53
SNORD3D-201ENST00000619178 CACNG4Q9UBN1 327 aa11.74□□□□□ -0.53
SNORD3D-201ENST00000619178 MAFFQ9ULX9 164 aa11.74□□□□□ -0.53
SNORD3D-201ENST00000619178 ARHGAP6O43182 974 aa11.73□□□□□ -0.53
SNORD3D-201ENST00000619178 CCP110O43303 1012 aa11.73□□□□□ -0.53
SNORD3D-201ENST00000619178 B4GALT3O60512 393 aa11.73□□□□□ -0.53
SNORD3D-201ENST00000619178 ITGB1P05556 798 aa11.73□□□□□ -0.53
SNORD3D-201ENST00000619178 CA3P07451 260 aa11.73□□□□□ -0.53
SNORD3D-201ENST00000619178 CPB1P15086 417 aa11.73□□□□□ -0.53
SNORD3D-201ENST00000619178 CYP11B1P15538 503 aa11.73□□□□□ -0.53
SNORD3D-201ENST00000619178 PTPN1P18031 435 aaKnown RBP11.73□□□□□ -0.53
SNORD3D-201ENST00000619178 TKTP29401 623 aaKnown RBP11.73□□□□□ -0.53
SNORD3D-201ENST00000619178 CLCN1P35523 988 aa11.73□□□□□ -0.53
SNORD3D-201ENST00000619178 ZNF132P52740 706 aa11.73□□□□□ -0.53
SNORD3D-201ENST00000619178 RAD23BP54727 409 aa11.73□□□□□ -0.53
SNORD3D-201ENST00000619178 ERVK-21P61565 698 aa11.73□□□□□ -0.53
SNORD3D-201ENST00000619178 KRT83P78385 493 aa11.73□□□□□ -0.53
SNORD3D-201ENST00000619178 CDR2Q01850 454 aa11.73□□□□□ -0.53
SNORD3D-201ENST00000619178 APBA1Q02410 837 aa11.73□□□□□ -0.53
SNORD3D-201ENST00000619178 MAPK8IP2Q13387 824 aaPredicted RBP11.73□□□□□ -0.53
SNORD3D-201ENST00000619178 PSMD5Q16401 504 aa11.73□□□□□ -0.53
SNORD3D-201ENST00000619178 PPP2R2DQ66LE6 453 aa11.73□□□□□ -0.53
SNORD3D-201ENST00000619178 IRF2BP2Q7Z5L9 587 aa11.73□□□□□ -0.53
SNORD3D-201ENST00000619178 VPS52Q8N1B4 723 aa11.73□□□□□ -0.53
SNORD3D-201ENST00000619178 FBXO22Q8NEZ5 403 aa11.73□□□□□ -0.53
SNORD3D-201ENST00000619178 KBTBD7Q8WVZ9 684 aa11.73□□□□□ -0.53
SNORD3D-201ENST00000619178 KAT5Q92993 513 aa11.73□□□□□ -0.53
SNORD3D-201ENST00000619178 PPP2R3CQ969Q6 453 aa11.73□□□□□ -0.53
SNORD3D-201ENST00000619178 EMILIN2Q9BXX0 1053 aa11.73□□□□□ -0.53
SNORD3D-201ENST00000619178 GPR62Q9BZJ7 368 aa11.73□□□□□ -0.53
SNORD3D-201ENST00000619178 SDCBP2Q9H190 292 aa11.73□□□□□ -0.53
SNORD3D-201ENST00000619178 NGRNQ9NPE2 291 aaKnown RBP11.73□□□□□ -0.53
SNORD3D-201ENST00000619178 SEPT11Q9NVA2 429 aaKnown RBP11.73□□□□□ -0.53
SNORD3D-201ENST00000619178 DPP7Q9UHL4 492 aa11.73□□□□□ -0.53
SNORD3D-201ENST00000619178 BACE2Q9Y5Z0 518 aa11.73□□□□□ -0.53
SNORD3D-201ENST00000619178 I3L4J1 428 aa11.72□□□□□ -0.53
SNORD3D-201ENST00000619178 LSM8O95777 96 aaKnown RBP11.72□□□□□ -0.53
SNORD3D-201ENST00000619178 PDGFRBP09619 1106 aa11.72□□□□□ -0.53
SNORD3D-201ENST00000619178 SETSIPP0DME0 302 aa11.72□□□□□ -0.53
SNORD3D-201ENST00000619178 CTSAP10619 480 aa11.72□□□□□ -0.53
SNORD3D-201ENST00000619178 FECHP22830 423 aa11.72□□□□□ -0.53
SNORD3D-201ENST00000619178 CA8P35219 290 aa11.72□□□□□ -0.53
SNORD3D-201ENST00000619178 RABGGTBP53611 331 aa11.72□□□□□ -0.53
SNORD3D-201ENST00000619178 DSG1Q02413 1049 aa11.72□□□□□ -0.53
SNORD3D-201ENST00000619178 SMC1AQ14683 1233 aaKnown RBP11.72□□□□□ -0.53
SNORD3D-201ENST00000619178 CNGA2Q16280 664 aa11.72□□□□□ -0.53
SNORD3D-201ENST00000619178 INTS6LQ5JSJ4 861 aaKnown RBP11.72□□□□□ -0.53
SNORD3D-201ENST00000619178 ARHGAP17Q68EM7 881 aa11.72□□□□□ -0.53
SNORD3D-201ENST00000619178 CD300LGQ6UXG3 332 aa11.72□□□□□ -0.53
SNORD3D-201ENST00000619178 TMC7Q7Z402 723 aa11.72□□□□□ -0.53
SNORD3D-201ENST00000619178 ACOT1Q86TX2 421 aa11.72□□□□□ -0.53
SNORD3D-201ENST00000619178 SPATA2LQ8IUW3 424 aaPredicted RBP11.72□□□□□ -0.53
SNORD3D-201ENST00000619178 RNF168Q8IYW5 571 aaPredicted RBP11.72□□□□□ -0.53
SNORD3D-201ENST00000619178 KLHL23Q8NBE8 558 aa11.72□□□□□ -0.53
SNORD3D-201ENST00000619178 SLC4A11Q8NBS3 891 aa11.72□□□□□ -0.53
SNORD3D-201ENST00000619178 TMEM35BQ8NCS4 154 aa11.72□□□□□ -0.53
SNORD3D-201ENST00000619178 MYCBPAPQ8TBZ2 947 aa11.72□□□□□ -0.53
SNORD3D-201ENST00000619178 SPPL2BQ8TCT7 592 aa11.72□□□□□ -0.53
SNORD3D-201ENST00000619178 EPS8L1Q8TE68 723 aa11.72□□□□□ -0.53
SNORD3D-201ENST00000619178 ZNF606Q8WXB4 792 aa11.72□□□□□ -0.53
SNORD3D-201ENST00000619178 RIN2Q8WYP3 895 aaPredicted RBP11.72□□□□□ -0.53
SNORD3D-201ENST00000619178 CYFIP2Q96F07 1278 aa11.72□□□□□ -0.53
SNORD3D-201ENST00000619178 TRIM11Q96F44 468 aa11.72□□□□□ -0.53
SNORD3D-201ENST00000619178 FUBP3Q96I24 572 aaKnown RBP eCLIP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms