RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 SFNP31947 248 aa15.62■□□□□ 0.09
COL5A1-208ENST00000618395 EIF2B5Q13144 721 aaKnown RBP15.62■□□□□ 0.09
COL5A1-208ENST00000618395 LPIN1Q14693 890 aa15.62■□□□□ 0.09
COL5A1-208ENST00000618395 SLC15A2Q16348 729 aa15.62■□□□□ 0.09
COL5A1-208ENST00000618395 YTHDF3Q7Z739 585 aaKnown RBP15.62■□□□□ 0.09
COL5A1-208ENST00000618395 TRPC4APQ8TEL6 797 aa15.62■□□□□ 0.09
COL5A1-208ENST00000618395 TNPO2O14787 897 aaKnown RBP15.62■□□□□ 0.09
COL5A1-208ENST00000618395 ARF4P18085 180 aaPredicted RBP15.62■□□□□ 0.09
COL5A1-208ENST00000618395 CCT8P50990 548 aa15.62■□□□□ 0.09
COL5A1-208ENST00000618395 GEMIN4P57678 1058 aaKnown RBP15.62■□□□□ 0.09
COL5A1-208ENST00000618395 OR6B2Q6IFH4 312 aa15.62■□□□□ 0.09
COL5A1-208ENST00000618395 ERP44Q9BS26 406 aa15.62■□□□□ 0.09
COL5A1-208ENST00000618395 ENO2P09104 434 aaPredicted RBP15.62■□□□□ 0.09
COL5A1-208ENST00000618395 PRKAR1AP10644 381 aa15.62■□□□□ 0.09
COL5A1-208ENST00000618395 CCNA2P20248 432 aa15.62■□□□□ 0.09
COL5A1-208ENST00000618395 ATP6V1C1P21283 382 aa15.62■□□□□ 0.09
COL5A1-208ENST00000618395 PWP1Q13610 501 aa15.62■□□□□ 0.09
COL5A1-208ENST00000618395 MTF1Q14872 753 aa15.62■□□□□ 0.09
COL5A1-208ENST00000618395 EPC2Q52LR7 807 aa15.62■□□□□ 0.09
COL5A1-208ENST00000618395 EFL1Q7Z2Z2 1120 aaKnown RBP15.62■□□□□ 0.09
COL5A1-208ENST00000618395 CENPLQ8N0S6 344 aaPredicted RBP15.62■□□□□ 0.09
COL5A1-208ENST00000618395 VPS37AQ8NEZ2 397 aa15.62■□□□□ 0.09
COL5A1-208ENST00000618395 KMT5AQ9NQR1 393 aa15.62■□□□□ 0.09
COL5A1-208ENST00000618395 L1RE1Q9UN81 338 aa15.62■□□□□ 0.09
COL5A1-208ENST00000618395 MAP3K15Q6ZN16 1313 aa15.62■□□□□ 0.09
COL5A1-208ENST00000618395 NOTOA8MTQ0 251 aa15.61■□□□□ 0.09
COL5A1-208ENST00000618395 FOSP01100 380 aaPredicted RBP15.61■□□□□ 0.09
COL5A1-208ENST00000618395 RPL5P46777 297 aaKnown RBP15.61■□□□□ 0.09
COL5A1-208ENST00000618395 NCALDP61601 193 aa15.61■□□□□ 0.09
COL5A1-208ENST00000618395 COBLL1Q53SF7 1204 aa15.61■□□□□ 0.09
COL5A1-208ENST00000618395 SLC9A4Q6AI14 798 aa15.61■□□□□ 0.09
COL5A1-208ENST00000618395 PNMA1Q8ND90 353 aa15.61■□□□□ 0.09
COL5A1-208ENST00000618395 RNF25Q96BH1 459 aaPredicted RBP15.61■□□□□ 0.09
COL5A1-208ENST00000618395 MAPRE3Q9UPY8 281 aa15.61■□□□□ 0.09
COL5A1-208ENST00000618395 ZHX2Q9Y6X8 837 aa15.61■□□□□ 0.09
COL5A1-208ENST00000618395 K7ERI5 159 aa15.61■□□□□ 0.09
COL5A1-208ENST00000618395 APOL1O14791 398 aa15.61■□□□□ 0.09
COL5A1-208ENST00000618395 ECDO95905 644 aaPredicted RBP15.61■□□□□ 0.09
COL5A1-208ENST00000618395 CDKL3Q8IVW4 592 aaPredicted RBP15.61■□□□□ 0.09
COL5A1-208ENST00000618395 OR6P1Q8NGX9 317 aa15.61■□□□□ 0.09
COL5A1-208ENST00000618395 ENOPH1Q9UHY7 261 aa15.61■□□□□ 0.09
COL5A1-208ENST00000618395 PABPC1P11940 636 aaKnown RBP15.61■□□□□ 0.09
COL5A1-208ENST00000618395 MSH3P20585 1137 aa15.61■□□□□ 0.09
COL5A1-208ENST00000618395 SLC1A1P43005 524 aa15.61■□□□□ 0.09
COL5A1-208ENST00000618395 SURF1Q15526 300 aa15.61■□□□□ 0.09
COL5A1-208ENST00000618395 CDC73Q6P1J9 531 aa15.61■□□□□ 0.09
COL5A1-208ENST00000618395 TRIM72Q6ZMU5 477 aa15.61■□□□□ 0.09
COL5A1-208ENST00000618395 MMGT1Q8N4V1 131 aa15.61■□□□□ 0.09
COL5A1-208ENST00000618395 YME1L1Q96TA2 773 aa15.61■□□□□ 0.09
COL5A1-208ENST00000618395 ATP8B3O60423 1300 aa15.61■□□□□ 0.09
COL5A1-208ENST00000618395 AKR1B1P15121 316 aa15.61■□□□□ 0.09
COL5A1-208ENST00000618395 FNTAP49354 379 aa15.61■□□□□ 0.09
COL5A1-208ENST00000618395 ROGDIQ9GZN7 287 aa15.61■□□□□ 0.09
COL5A1-208ENST00000618395 CLOCKO15516 846 aa15.61■□□□□ 0.09
COL5A1-208ENST00000618395 EXTL3O43909 919 aa15.61■□□□□ 0.09
COL5A1-208ENST00000618395 CSNK2BP67870 215 aa15.61■□□□□ 0.09
COL5A1-208ENST00000618395 RHAGQ02094 409 aa15.61■□□□□ 0.09
COL5A1-208ENST00000618395 PI4K2BQ8TCG2 481 aa15.61■□□□□ 0.09
COL5A1-208ENST00000618395 PGBD4Q96DM1 585 aa15.61■□□□□ 0.09
COL5A1-208ENST00000618395 ACAT2Q9BWD1 397 aa15.61■□□□□ 0.09
COL5A1-208ENST00000618395 PABPC3Q9H361 631 aaKnown RBP15.61■□□□□ 0.09
COL5A1-208ENST00000618395 TESPA1A2RU30 521 aaPredicted RBP15.61■□□□□ 0.09
COL5A1-208ENST00000618395 ELF3P78545 371 aaPredicted RBP15.61■□□□□ 0.09
COL5A1-208ENST00000618395 TAF5Q15542 800 aa15.61■□□□□ 0.09
COL5A1-208ENST00000618395 FAR2Q96K12 515 aa15.61■□□□□ 0.09
COL5A1-208ENST00000618395 HEXIM2Q96MH2 286 aaKnown RBP15.61■□□□□ 0.09
COL5A1-208ENST00000618395 NACC1Q96RE7 527 aa15.61■□□□□ 0.09
COL5A1-208ENST00000618395 SAGE2PA6NJ88 616 aa15.61■□□□□ 0.09
COL5A1-208ENST00000618395 HK2P52789 917 aa15.61■□□□□ 0.09
COL5A1-208ENST00000618395 ACAP1Q15027 740 aa15.61■□□□□ 0.09
COL5A1-208ENST00000618395 BICRALQ6AI39 1079 aa15.61■□□□□ 0.09
COL5A1-208ENST00000618395 LLGL2Q6P1M3 1020 aa15.61■□□□□ 0.09
COL5A1-208ENST00000618395 THUMPD3Q9BV44 507 aaKnown RBP15.61■□□□□ 0.09
COL5A1-208ENST00000618395 TMBIM4Q9HC24 238 aa15.61■□□□□ 0.09
COL5A1-208ENST00000618395 CUEDC1Q9NWM3 386 aaPredicted RBP15.61■□□□□ 0.09
COL5A1-208ENST00000618395 LMCD1Q9NZU5 365 aa15.61■□□□□ 0.09
COL5A1-208ENST00000618395 GCC2Q8IWJ2 1684 aa15.61■□□□□ 0.09
COL5A1-208ENST00000618395 PTGES3LE9PB15 166 aa15.6■□□□□ 0.09
COL5A1-208ENST00000618395 TEX28O15482 410 aa15.6■□□□□ 0.09
COL5A1-208ENST00000618395 SYNCRIPO60506 623 aaKnown RBP15.6■□□□□ 0.09
COL5A1-208ENST00000618395 MYL12AP19105 171 aa15.6■□□□□ 0.09
COL5A1-208ENST00000618395 TFE3P19532 575 aaPredicted RBP15.6■□□□□ 0.09
COL5A1-208ENST00000618395 PTDSS1P48651 473 aaKnown RBP15.6■□□□□ 0.09
COL5A1-208ENST00000618395 ACTR2P61160 394 aa15.6■□□□□ 0.09
COL5A1-208ENST00000618395 HMBOX1Q6NT76 420 aa15.6■□□□□ 0.09
COL5A1-208ENST00000618395 RNF139Q8WU17 664 aa15.6■□□□□ 0.09
COL5A1-208ENST00000618395 RBM17Q96I25 401 aaKnown RBP15.6■□□□□ 0.09
COL5A1-208ENST00000618395 SENP7Q9BQF6 1050 aa15.6■□□□□ 0.09
COL5A1-208ENST00000618395 CDK13Q14004 1512 aaKnown RBP15.6■□□□□ 0.09
COL5A1-208ENST00000618395 FGAP02671 866 aa15.6■□□□□ 0.09
COL5A1-208ENST00000618395 KCNH2Q12809 1159 aa15.6■□□□□ 0.09
COL5A1-208ENST00000618395 ZNF280DQ6N043 979 aa15.6■□□□□ 0.09
COL5A1-208ENST00000618395 NYAP1Q6ZVC0 841 aa15.6■□□□□ 0.09
COL5A1-208ENST00000618395 NOA1Q8NC60 698 aaKnown RBP15.6■□□□□ 0.09
COL5A1-208ENST00000618395 LOC100506127A0A0U1RQW1 187 aa15.6■□□□□ 0.09
COL5A1-208ENST00000618395 ASS1P00966 412 aaKnown RBP15.6■□□□□ 0.09
COL5A1-208ENST00000618395 ANKS3Q6ZW76 656 aa15.6■□□□□ 0.09
COL5A1-208ENST00000618395 C7orf31Q8N865 590 aa15.6■□□□□ 0.09
COL5A1-208ENST00000618395 DGCR6LQ9BY27 220 aa15.6■□□□□ 0.09
COL5A1-208ENST00000618395 SMARCAL1Q9NZC9 954 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms