RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 MAP3K21Q5TCX8 1036 aa14.59□□□□□ -0.07
CIITA-213ENST00000618327 KIF9Q9HAQ2 790 aa14.59□□□□□ -0.07
CIITA-213ENST00000618327 VCX3AQ9NNX9 186 aa14.59□□□□□ -0.07
CIITA-213ENST00000618327 ZBTB22O15209 634 aa14.59□□□□□ -0.07
CIITA-213ENST00000618327 LSM8O95777 96 aaKnown RBP14.59□□□□□ -0.07
CIITA-213ENST00000618327 PRLRP16471 622 aa14.59□□□□□ -0.07
CIITA-213ENST00000618327 YY1P25490 414 aa14.59□□□□□ -0.07
CIITA-213ENST00000618327 TPI1P60174 286 aa14.59□□□□□ -0.07
CIITA-213ENST00000618327 KCNMA1Q12791 1236 aa14.59□□□□□ -0.07
CIITA-213ENST00000618327 CLEC16AQ2KHT3 1053 aa14.59□□□□□ -0.07
CIITA-213ENST00000618327 SMTNL2Q2TAL5 461 aa14.59□□□□□ -0.07
CIITA-213ENST00000618327 DEFB115Q30KQ5 88 aa14.59□□□□□ -0.07
CIITA-213ENST00000618327 PAPD7Q5XG87 772 aaKnown RBP14.59□□□□□ -0.07
CIITA-213ENST00000618327 CXCL17Q6UXB2 119 aa14.59□□□□□ -0.07
CIITA-213ENST00000618327 IRF2BP1Q8IU81 584 aa14.59□□□□□ -0.07
CIITA-213ENST00000618327 GPR20Q99678 358 aa14.59□□□□□ -0.07
CIITA-213ENST00000618327 SPATS2LQ9NUQ6 558 aaKnown RBP14.59□□□□□ -0.07
CIITA-213ENST00000618327 EHD2Q9NZN4 543 aa14.59□□□□□ -0.07
CIITA-213ENST00000618327 DCDC2CA8MYV0 355 aa14.59□□□□□ -0.07
CIITA-213ENST00000618327 ICAM3P32942 547 aa14.59□□□□□ -0.07
CIITA-213ENST00000618327 DEUP1Q05D60 604 aa14.59□□□□□ -0.07
CIITA-213ENST00000618327 ADGRF2Q8IZF7 708 aa14.59□□□□□ -0.07
CIITA-213ENST00000618327 RAD51CO43502 376 aa14.58□□□□□ -0.07
CIITA-213ENST00000618327 LUC7L3O95232 432 aaKnown RBP14.58□□□□□ -0.07
CIITA-213ENST00000618327 SERPINB6P35237 376 aa14.58□□□□□ -0.07
CIITA-213ENST00000618327 MAPRE1Q15691 268 aaKnown RBP14.58□□□□□ -0.07
CIITA-213ENST00000618327 JADE1Q6IE81 842 aa14.58□□□□□ -0.07
CIITA-213ENST00000618327 MMGT1Q8N4V1 131 aa14.58□□□□□ -0.07
CIITA-213ENST00000618327 ZNF606Q8WXB4 792 aa14.58□□□□□ -0.07
CIITA-213ENST00000618327 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.58□□□□□ -0.07
CIITA-213ENST00000618327 FBXL5Q9UKA1 691 aa14.58□□□□□ -0.07
CIITA-213ENST00000618327 TNFSF13BQ9Y275 285 aa14.58□□□□□ -0.07
CIITA-213ENST00000618327 A0A087WUV0 522 aaPredicted RBP14.58□□□□□ -0.08
CIITA-213ENST00000618327 DDX3XO00571 662 aaKnown RBP eCLIP14.58□□□□□ -0.08
CIITA-213ENST00000618327 SLC4A1P02730 911 aa14.58□□□□□ -0.08
CIITA-213ENST00000618327 IFT88Q13099 833 aa14.58□□□□□ -0.08
CIITA-213ENST00000618327 DUSP28Q4G0W2 176 aa14.58□□□□□ -0.08
CIITA-213ENST00000618327 SH3D19Q5HYK7 790 aa14.58□□□□□ -0.08
CIITA-213ENST00000618327 CCNI2Q6ZMN8 369 aaPredicted RBP14.58□□□□□ -0.08
CIITA-213ENST00000618327 DEPDC1BQ8WUY9 529 aa14.58□□□□□ -0.08
CIITA-213ENST00000618327 IQANK1A0A1B0GTG1 560 aa14.58□□□□□ -0.08
CIITA-213ENST00000618327 EPHB6O15197 1021 aa14.58□□□□□ -0.08
CIITA-213ENST00000618327 OPHN1O60890 802 aa14.58□□□□□ -0.08
CIITA-213ENST00000618327 SMIM10L2AP0DMW4 78 aa14.58□□□□□ -0.08
CIITA-213ENST00000618327 SMIM10L2BP0DMW5 78 aa14.58□□□□□ -0.08
CIITA-213ENST00000618327 GHRP10912 638 aa14.58□□□□□ -0.08
CIITA-213ENST00000618327 SP3Q02447 781 aa14.58□□□□□ -0.08
CIITA-213ENST00000618327 PDIA2Q13087 525 aaKnown RBP14.58□□□□□ -0.08
CIITA-213ENST00000618327 NT5DC4Q86YG4 428 aa14.58□□□□□ -0.08
CIITA-213ENST00000618327 RSAD1Q9HA92 442 aa14.58□□□□□ -0.08
CIITA-213ENST00000618327 GLI3P10071 1580 aa14.58□□□□□ -0.08
CIITA-213ENST00000618327 ARHGAP42A6NI28 874 aa14.57□□□□□ -0.08
CIITA-213ENST00000618327 PPP1R12AO14974 1030 aaPredicted RBP14.57□□□□□ -0.08
CIITA-213ENST00000618327 EPHB1P54762 984 aa14.57□□□□□ -0.08
CIITA-213ENST00000618327 MTHFD1LQ6UB35 978 aa14.57□□□□□ -0.08
CIITA-213ENST00000618327 BARX2Q9UMQ3 279 aaPredicted RBP14.57□□□□□ -0.08
CIITA-213ENST00000618327 TCHHQ07283 1943 aa14.57□□□□□ -0.08
CIITA-213ENST00000618327 LOC102724159A0A0B4J2E5 919 aa14.57□□□□□ -0.08
CIITA-213ENST00000618327 SOWAHBA6NEL2 793 aa14.57□□□□□ -0.08
CIITA-213ENST00000618327 XPAP23025 273 aaPredicted RBP14.57□□□□□ -0.08
CIITA-213ENST00000618327 BYSLQ13895 437 aaKnown RBP14.57□□□□□ -0.08
CIITA-213ENST00000618327 PWP2Q15269 919 aaKnown RBP14.57□□□□□ -0.08
CIITA-213ENST00000618327 PAN2Q504Q3 1202 aaKnown RBP14.57□□□□□ -0.08
CIITA-213ENST00000618327 SLC13A5Q86YT5 568 aaPredicted RBP14.57□□□□□ -0.08
CIITA-213ENST00000618327 JAMLQ86YT9 394 aa14.57□□□□□ -0.08
CIITA-213ENST00000618327 PPTC7Q8NI37 304 aa14.57□□□□□ -0.08
CIITA-213ENST00000618327 HMX1Q9NP08 348 aaPredicted RBP14.57□□□□□ -0.08
CIITA-213ENST00000618327 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.57□□□□□ -0.08
CIITA-213ENST00000618327 COL22A1Q8NFW1 1626 aaPredicted RBP14.57□□□□□ -0.08
CIITA-213ENST00000618327 CTIFO43310 598 aaKnown RBP14.57□□□□□ -0.08
CIITA-213ENST00000618327 CST8O60676 142 aa14.57□□□□□ -0.08
CIITA-213ENST00000618327 PGK1P00558 417 aa14.57□□□□□ -0.08
CIITA-213ENST00000618327 EIF4BP23588 611 aaKnown RBP14.57□□□□□ -0.08
CIITA-213ENST00000618327 HP1BP3Q5SSJ5 553 aaPredicted RBP14.57□□□□□ -0.08
CIITA-213ENST00000618327 ZBED8Q8IZ13 594 aa14.57□□□□□ -0.08
CIITA-213ENST00000618327 SLC7A14Q8TBB6 771 aa14.57□□□□□ -0.08
CIITA-213ENST00000618327 PPP1R13LQ8WUF5 828 aa14.57□□□□□ -0.08
CIITA-213ENST00000618327 EXOC4Q96A65 974 aa14.57□□□□□ -0.08
CIITA-213ENST00000618327 MROH7Q68CQ1 1323 aa14.57□□□□□ -0.08
CIITA-213ENST00000618327 BAG2O95816 211 aa14.57□□□□□ -0.08
CIITA-213ENST00000618327 CA4P22748 312 aa14.57□□□□□ -0.08
CIITA-213ENST00000618327 PTENP60484 403 aa14.57□□□□□ -0.08
CIITA-213ENST00000618327 CFAP61Q8NHU2 1237 aa14.57□□□□□ -0.08
CIITA-213ENST00000618327 KAT5Q92993 513 aa14.57□□□□□ -0.08
CIITA-213ENST00000618327 TEPSINQ96N21 525 aa14.57□□□□□ -0.08
CIITA-213ENST00000618327 SEPT5Q99719 369 aaPredicted RBP14.57□□□□□ -0.08
CIITA-213ENST00000618327 ACO2Q99798 780 aaKnown RBP14.57□□□□□ -0.08
CIITA-213ENST00000618327 TRAIPQ9BWF2 469 aa14.57□□□□□ -0.08
CIITA-213ENST00000618327 FSD1LQ9BXM9 530 aa14.57□□□□□ -0.08
CIITA-213ENST00000618327 TPX2Q9ULW0 747 aaKnown RBP14.57□□□□□ -0.08
CIITA-213ENST00000618327 TRPV2Q9Y5S1 764 aa14.57□□□□□ -0.08
CIITA-213ENST00000618327 F5H423 210 aaPredicted RBP14.56□□□□□ -0.08
CIITA-213ENST00000618327 KCNN4O15554 427 aa14.56□□□□□ -0.08
CIITA-213ENST00000618327 PSTPIP1O43586 416 aa14.56□□□□□ -0.08
CIITA-213ENST00000618327 AP1G2O75843 785 aa14.56□□□□□ -0.08
CIITA-213ENST00000618327 KRT37O76014 449 aa14.56□□□□□ -0.08
CIITA-213ENST00000618327 RPSAP08865 295 aaKnown RBP14.56□□□□□ -0.08
CIITA-213ENST00000618327 KCNJ1P48048 391 aa14.56□□□□□ -0.08
CIITA-213ENST00000618327 RAB27AP51159 221 aa14.56□□□□□ -0.08
CIITA-213ENST00000618327 ATN1P54259 1190 aaPredicted RBP14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms