RNA–Protein interactions for RNA: ENST00000617799.1

SBDS-205, Transcript of SBDS, ribosome maturation factor, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SBDS, Length 953 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDS-205ENST00000617799 HDAC7Q8WUI4 952 aa18.37■□□□□ 0.53
SBDS-205ENST00000617799 SEMA4DQ92854 862 aa18.37■□□□□ 0.53
SBDS-205ENST00000617799 MSLNLQ96KJ4 702 aa18.37■□□□□ 0.53
SBDS-205ENST00000617799 RTP3Q9BQQ7 232 aa18.37■□□□□ 0.53
SBDS-205ENST00000617799 MRPL45Q9BRJ2 306 aaKnown RBP18.37■□□□□ 0.53
SBDS-205ENST00000617799 CYP4F11Q9HBI6 524 aa18.37■□□□□ 0.53
SBDS-205ENST00000617799 WARSP23381 471 aaKnown RBP18.36■□□□□ 0.53
SBDS-205ENST00000617799 CDR1P51861 262 aa18.36■□□□□ 0.53
SBDS-205ENST00000617799 ADCY1Q08828 1119 aa18.36■□□□□ 0.53
SBDS-205ENST00000617799 SMAD4Q13485 552 aaKnown RBP18.36■□□□□ 0.53
SBDS-205ENST00000617799 NCAPHQ15003 741 aa18.36■□□□□ 0.53
SBDS-205ENST00000617799 MAN2A1Q16706 1144 aa18.36■□□□□ 0.53
SBDS-205ENST00000617799 PTCRAQ6ISU1 281 aaPredicted RBP18.36■□□□□ 0.53
SBDS-205ENST00000617799 SYCE2Q6PIF2 218 aa18.36■□□□□ 0.53
SBDS-205ENST00000617799 RNF19BQ6ZMZ0 732 aa18.36■□□□□ 0.53
SBDS-205ENST00000617799 CCDC149Q6ZUS6 474 aa18.36■□□□□ 0.53
SBDS-205ENST00000617799 IRF2BP1Q8IU81 584 aa18.36■□□□□ 0.53
SBDS-205ENST00000617799 KBTBD7Q8WVZ9 684 aa18.36■□□□□ 0.53
SBDS-205ENST00000617799 ATXN2LQ8WWM7 1075 aaKnown RBP18.36■□□□□ 0.53
SBDS-205ENST00000617799 FAXDC2Q96IV6 333 aa18.36■□□□□ 0.53
SBDS-205ENST00000617799 NIF3L1Q9GZT8 377 aa18.36■□□□□ 0.53
SBDS-205ENST00000617799 ZCWPW1Q9H0M4 648 aa18.36■□□□□ 0.53
SBDS-205ENST00000617799 SAMSN1Q9NSI8 373 aaKnown RBP18.36■□□□□ 0.53
SBDS-205ENST00000617799 FANCLQ9NW38 375 aa18.36■□□□□ 0.53
SBDS-205ENST00000617799 AFF4Q9UHB7 1163 aaKnown RBP18.36■□□□□ 0.53
SBDS-205ENST00000617799 FAM50BQ9Y247 325 aa18.36■□□□□ 0.53
SBDS-205ENST00000617799 REV3LO60673 3130 aa18.36■□□□□ 0.53
SBDS-205ENST00000617799 GTPBP10A4D1E9 387 aaKnown RBP18.35■□□□□ 0.53
SBDS-205ENST00000617799 LRRC10BA6NIK2 292 aa18.35■□□□□ 0.53
SBDS-205ENST00000617799 PES1O00541 588 aaKnown RBP18.35■□□□□ 0.53
SBDS-205ENST00000617799 HCRTO43612 131 aa18.35■□□□□ 0.53
SBDS-205ENST00000617799 TACC1O75410 805 aa18.35■□□□□ 0.53
SBDS-205ENST00000617799 RFPL2O75678 378 aa18.35■□□□□ 0.53
SBDS-205ENST00000617799 ABLIM3O94929 683 aa18.35■□□□□ 0.53
SBDS-205ENST00000617799 TPM3P06753 285 aa18.35■□□□□ 0.53
SBDS-205ENST00000617799 PDGFRBP09619 1106 aa18.35■□□□□ 0.53
SBDS-205ENST00000617799 ATF2P15336 505 aa18.35■□□□□ 0.53
SBDS-205ENST00000617799 ZNF18P17022 549 aa18.35■□□□□ 0.53
SBDS-205ENST00000617799 GNL1P36915 607 aaPredicted RBP18.35■□□□□ 0.53
SBDS-205ENST00000617799 KCNQ1P51787 676 aa18.35■□□□□ 0.53
SBDS-205ENST00000617799 CDH8P55286 799 aa18.35■□□□□ 0.53
SBDS-205ENST00000617799 GPR17Q13304 367 aa18.35■□□□□ 0.53
SBDS-205ENST00000617799 PUS10Q3MIT2 529 aaKnown RBP18.35■□□□□ 0.53
SBDS-205ENST00000617799 FILIP1LQ4L180 1135 aa18.35■□□□□ 0.53
SBDS-205ENST00000617799 SMRP1Q8NCR6 262 aa18.35■□□□□ 0.53
SBDS-205ENST00000617799 SYT15Q9BQS2 421 aa18.35■□□□□ 0.53
SBDS-205ENST00000617799 ACBD6Q9BR61 282 aa18.35■□□□□ 0.53
SBDS-205ENST00000617799 TUBGCP2Q9BSJ2 902 aa18.35■□□□□ 0.53
SBDS-205ENST00000617799 PIDD1Q9HB75 910 aa18.35■□□□□ 0.53
SBDS-205ENST00000617799 APOBEC3GQ9HC16 384 aaKnown RBP18.35■□□□□ 0.53
SBDS-205ENST00000617799 CCDC195A0A1B0GUA6 201 aa18.34■□□□□ 0.53
SBDS-205ENST00000617799 A8MXQ7 604 aa18.34■□□□□ 0.53
SBDS-205ENST00000617799 GABRDO14764 452 aa18.34■□□□□ 0.53
SBDS-205ENST00000617799 LRRN2O75325 713 aa18.34■□□□□ 0.53
SBDS-205ENST00000617799 ZMYND10O75800 440 aa18.34■□□□□ 0.53
SBDS-205ENST00000617799 WEE2P0C1S8 567 aa18.34■□□□□ 0.53
SBDS-205ENST00000617799 LMO2P25791 158 aa18.34■□□□□ 0.53
SBDS-205ENST00000617799 ASPAP45381 313 aa18.34■□□□□ 0.53
SBDS-205ENST00000617799 PSMC1P62191 440 aaKnown RBP18.34■□□□□ 0.53
SBDS-205ENST00000617799 ITIH3Q06033 890 aa18.34■□□□□ 0.53
SBDS-205ENST00000617799 LRMPQ12912 555 aa18.34■□□□□ 0.53
SBDS-205ENST00000617799 INTS6LQ5JSJ4 861 aaKnown RBP18.34■□□□□ 0.53
SBDS-205ENST00000617799 LIMS2Q7Z4I7 341 aa18.34■□□□□ 0.53
SBDS-205ENST00000617799 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.34■□□□□ 0.53
SBDS-205ENST00000617799 RIPOR3Q96MK2 946 aa18.34■□□□□ 0.53
SBDS-205ENST00000617799 ASB2Q96Q27 587 aa18.34■□□□□ 0.53
SBDS-205ENST00000617799 SDCBP2Q9H190 292 aa18.34■□□□□ 0.53
SBDS-205ENST00000617799 ADAM7Q9H2U9 754 aa18.34■□□□□ 0.53
SBDS-205ENST00000617799 ZDHHC7Q9NXF8 308 aa18.34■□□□□ 0.53
SBDS-205ENST00000617799 ABI2Q9NYB9 513 aaPredicted RBP18.34■□□□□ 0.53
SBDS-205ENST00000617799 LIMA1Q9UHB6 759 aaKnown RBP18.34■□□□□ 0.53
SBDS-205ENST00000617799 CDH9Q9ULB4 789 aa18.34■□□□□ 0.53
SBDS-205ENST00000617799 COQ4Q9Y3A0 265 aa18.34■□□□□ 0.53
SBDS-205ENST00000617799 USP15Q9Y4E8 981 aaPredicted RBP18.34■□□□□ 0.53
SBDS-205ENST00000617799 MTCL1Q9Y4B5 1905 aaKnown RBP18.33■□□□□ 0.53
SBDS-205ENST00000617799 MTMR11A4FU01 709 aa18.33■□□□□ 0.52
SBDS-205ENST00000617799 GRXCR2A6NFK2 248 aa18.33■□□□□ 0.52
SBDS-205ENST00000617799 CCL16O15467 120 aa18.33■□□□□ 0.52
SBDS-205ENST00000617799 MBTPS2O43462 519 aa18.33■□□□□ 0.52
SBDS-205ENST00000617799 SEC24AO95486 1093 aa18.33■□□□□ 0.52
SBDS-205ENST00000617799 LRG1P02750 347 aa18.33■□□□□ 0.52
SBDS-205ENST00000617799 FAM163BP0C2L3 166 aa18.33■□□□□ 0.52
SBDS-205ENST00000617799 CD58P19256 250 aa18.33■□□□□ 0.52
SBDS-205ENST00000617799 DUSP4Q13115 394 aa18.33■□□□□ 0.52
SBDS-205ENST00000617799 NFE2Q16621 373 aaPredicted RBP18.33■□□□□ 0.52
SBDS-205ENST00000617799 UVSSAQ2YD98 709 aa18.33■□□□□ 0.52
SBDS-205ENST00000617799 TCEAL8Q8IYN2 117 aa18.33■□□□□ 0.52
SBDS-205ENST00000617799 ATAD1Q8NBU5 361 aa18.33■□□□□ 0.52
SBDS-205ENST00000617799 SMG7Q92540 1137 aaKnown RBP18.33■□□□□ 0.52
SBDS-205ENST00000617799 FAM81BQ96LP2 452 aa18.33■□□□□ 0.52
SBDS-205ENST00000617799 NT5C1BQ96P26 610 aa18.33■□□□□ 0.52
SBDS-205ENST00000617799 SEPT5Q99719 369 aaPredicted RBP18.33■□□□□ 0.52
SBDS-205ENST00000617799 FAM124BQ9H5Z6 455 aaPredicted RBP18.33■□□□□ 0.52
SBDS-205ENST00000617799 CYP3A43Q9HB55 503 aa18.33■□□□□ 0.52
SBDS-205ENST00000617799 GCNT4Q9P109 453 aa18.33■□□□□ 0.52
SBDS-205ENST00000617799 GTF3C4Q9UKN8 822 aa18.33■□□□□ 0.52
SBDS-205ENST00000617799 MAFFQ9ULX9 164 aa18.33■□□□□ 0.52
SBDS-205ENST00000617799 SLC27A5Q9Y2P5 690 aa18.33■□□□□ 0.52
SBDS-205ENST00000617799 PCDHB5Q9Y5E4 795 aa18.33■□□□□ 0.52
SBDS-205ENST00000617799 INSL5Q9Y5Q6 135 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms