RNA–Protein interactions for RNA: ENST00000617757.1

TARDBP-219, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 434 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-219ENST00000617757 LCA5LO95447 670 aa8.59□□□□□ -1.03
TARDBP-219ENST00000617757 MMEP08473 750 aa8.59□□□□□ -1.03
TARDBP-219ENST00000617757 PDGFRBP09619 1106 aa8.59□□□□□ -1.03
TARDBP-219ENST00000617757 LINC00271P0C7V0 271 aa8.59□□□□□ -1.03
TARDBP-219ENST00000617757 FAM228BP0C875 321 aa8.59□□□□□ -1.03
TARDBP-219ENST00000617757 VDRP11473 427 aa8.59□□□□□ -1.03
TARDBP-219ENST00000617757 LAG3P18627 525 aa8.59□□□□□ -1.03
TARDBP-219ENST00000617757 TNFAIP3P21580 790 aa8.59□□□□□ -1.03
TARDBP-219ENST00000617757 ANXA13P27216 316 aa8.59□□□□□ -1.03
TARDBP-219ENST00000617757 TKTP29401 623 aaKnown RBP8.59□□□□□ -1.03
TARDBP-219ENST00000617757 CYLC1P35663 651 aaPredicted RBP8.59□□□□□ -1.03
TARDBP-219ENST00000617757 LHX1P48742 406 aa8.59□□□□□ -1.03
TARDBP-219ENST00000617757 RGS19P49795 217 aa8.59□□□□□ -1.03
TARDBP-219ENST00000617757 KIF11P52732 1056 aa8.59□□□□□ -1.03
TARDBP-219ENST00000617757 FMO1Q01740 532 aa8.59□□□□□ -1.03
TARDBP-219ENST00000617757 CDR2Q01850 454 aa8.59□□□□□ -1.03
TARDBP-219ENST00000617757 ELAVL2Q12926 359 aaKnown RBP8.59□□□□□ -1.03
TARDBP-219ENST00000617757 BMS1Q14692 1282 aaKnown RBP8.59□□□□□ -1.03
TARDBP-219ENST00000617757 TAF3Q5VWG9 929 aa8.59□□□□□ -1.03
TARDBP-219ENST00000617757 OVOS1Q6IE37 1185 aa8.59□□□□□ -1.03
TARDBP-219ENST00000617757 ACOT1Q86TX2 421 aa8.59□□□□□ -1.03
TARDBP-219ENST00000617757 CRYBG2Q8N1P7 616 aa8.59□□□□□ -1.03
TARDBP-219ENST00000617757 SLC39A11Q8N1S5 342 aa8.59□□□□□ -1.03
TARDBP-219ENST00000617757 COLGALT1Q8NBJ5 622 aa8.59□□□□□ -1.03
TARDBP-219ENST00000617757 SLC30A5Q8TAD4 765 aa8.59□□□□□ -1.03
TARDBP-219ENST00000617757 BCL7CQ8WUZ0 217 aaPredicted RBP8.59□□□□□ -1.03
TARDBP-219ENST00000617757 ZNF606Q8WXB4 792 aa8.59□□□□□ -1.03
TARDBP-219ENST00000617757 CLP1Q92989 425 aaKnown RBP8.59□□□□□ -1.03
TARDBP-219ENST00000617757 RNPC3Q96LT9 517 aaKnown RBP8.59□□□□□ -1.03
TARDBP-219ENST00000617757 HEXIM2Q96MH2 286 aaKnown RBP8.59□□□□□ -1.03
TARDBP-219ENST00000617757 ZNF558Q96NG5 402 aa8.59□□□□□ -1.03
TARDBP-219ENST00000617757 EIF3CQ99613 913 aaKnown RBP8.59□□□□□ -1.03
TARDBP-219ENST00000617757 GDF15Q99988 308 aa8.59□□□□□ -1.03
TARDBP-219ENST00000617757 RTP3Q9BQQ7 232 aa8.59□□□□□ -1.03
TARDBP-219ENST00000617757 ZSWIM1Q9BR11 485 aa8.59□□□□□ -1.03
TARDBP-219ENST00000617757 GPR62Q9BZJ7 368 aa8.59□□□□□ -1.03
TARDBP-219ENST00000617757 DPEP3Q9H4B8 488 aa8.59□□□□□ -1.03
TARDBP-219ENST00000617757 DEF6Q9H4E7 631 aa8.59□□□□□ -1.03
TARDBP-219ENST00000617757 DDX43Q9NXZ2 648 aaKnown RBP8.59□□□□□ -1.03
TARDBP-219ENST00000617757 ADAMTS1Q9UHI8 967 aa8.59□□□□□ -1.03
TARDBP-219ENST00000617757 KIAA1257Q9ULG3 409 aa8.59□□□□□ -1.03
TARDBP-219ENST00000617757 PYCARDQ9ULZ3 195 aa8.59□□□□□ -1.03
TARDBP-219ENST00000617757 PLXNA3P51805 1871 aa8.58□□□□□ -1.04
TARDBP-219ENST00000617757 LCHNA4D1U4 455 aa8.58□□□□□ -1.04
TARDBP-219ENST00000617757 CARNS1A5YM72 827 aa8.58□□□□□ -1.04
TARDBP-219ENST00000617757 H0YGN5 161 aa8.58□□□□□ -1.04
TARDBP-219ENST00000617757 DDX3XO00571 662 aaKnown RBP eCLIP8.58□□□□□ -1.04
TARDBP-219ENST00000617757 ZNF263O14978 683 aa8.58□□□□□ -1.04
TARDBP-219ENST00000617757 SYN3O14994 580 aa8.58□□□□□ -1.04
TARDBP-219ENST00000617757 MED7O43513 233 aa8.58□□□□□ -1.04
TARDBP-219ENST00000617757 OAZ2O95190 189 aa8.58□□□□□ -1.04
TARDBP-219ENST00000617757 CFHP08603 1231 aa8.58□□□□□ -1.04
TARDBP-219ENST00000617757 CD19P15391 556 aa8.58□□□□□ -1.04
TARDBP-219ENST00000617757 PTPN1P18031 435 aaKnown RBP8.58□□□□□ -1.04
TARDBP-219ENST00000617757 FGFR3P22607 806 aa8.58□□□□□ -1.04
TARDBP-219ENST00000617757 ACAT1P24752 427 aaKnown RBP8.58□□□□□ -1.04
TARDBP-219ENST00000617757 BRD2P25440 801 aaKnown RBP8.58□□□□□ -1.04
TARDBP-219ENST00000617757 SSTR3P32745 418 aaPredicted RBP8.58□□□□□ -1.04
TARDBP-219ENST00000617757 RABGGTBP53611 331 aa8.58□□□□□ -1.04
TARDBP-219ENST00000617757 YWHAHQ04917 246 aaPredicted RBP8.58□□□□□ -1.04
TARDBP-219ENST00000617757 GFPT1Q06210 699 aaPredicted RBP8.58□□□□□ -1.04
TARDBP-219ENST00000617757 MRPL58Q14197 206 aaKnown RBP8.58□□□□□ -1.04
TARDBP-219ENST00000617757 SLC18A3Q16572 532 aa8.58□□□□□ -1.04
TARDBP-219ENST00000617757 SGO2Q562F6 1265 aa8.58□□□□□ -1.04
TARDBP-219ENST00000617757 FAM171A1Q5VUB5 890 aa8.58□□□□□ -1.04
TARDBP-219ENST00000617757 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.58□□□□□ -1.04
TARDBP-219ENST00000617757 TOGARAM2Q6ZUX3 1019 aa8.58□□□□□ -1.04
TARDBP-219ENST00000617757 TAS1R1Q7RTX1 841 aa8.58□□□□□ -1.04
TARDBP-219ENST00000617757 VPS36Q86VN1 386 aa8.58□□□□□ -1.04
TARDBP-219ENST00000617757 PALB2Q86YC2 1186 aa8.58□□□□□ -1.04
TARDBP-219ENST00000617757 GLYCTKQ8IVS8 523 aa8.58□□□□□ -1.04
TARDBP-219ENST00000617757 RNF168Q8IYW5 571 aaPredicted RBP8.58□□□□□ -1.04
TARDBP-219ENST00000617757 THEM5Q8N1Q8 247 aa8.58□□□□□ -1.04
TARDBP-219ENST00000617757 C12orf29Q8N999 325 aa8.58□□□□□ -1.04
TARDBP-219ENST00000617757 B3GALNT2Q8NCR0 500 aa8.58□□□□□ -1.04
TARDBP-219ENST00000617757 ACRBPQ8NEB7 543 aa8.58□□□□□ -1.04
TARDBP-219ENST00000617757 TFAP2BQ92481 460 aa8.58□□□□□ -1.04
TARDBP-219ENST00000617757 TNIP3Q96KP6 325 aa8.58□□□□□ -1.04
TARDBP-219ENST00000617757 PCDHB18PQ96TA0 734 aa8.58□□□□□ -1.04
TARDBP-219ENST00000617757 LPIN3Q9BQK8 851 aa8.58□□□□□ -1.04
TARDBP-219ENST00000617757 ACBD6Q9BR61 282 aa8.58□□□□□ -1.04
TARDBP-219ENST00000617757 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.58□□□□□ -1.04
TARDBP-219ENST00000617757 UBE2OQ9C0C9 1292 aaKnown RBP8.58□□□□□ -1.04
TARDBP-219ENST00000617757 DNAI2Q9GZS0 605 aa8.58□□□□□ -1.04
TARDBP-219ENST00000617757 CRTAC1Q9NQ79 661 aa8.58□□□□□ -1.04
TARDBP-219ENST00000617757 AAASQ9NRG9 546 aa8.58□□□□□ -1.04
TARDBP-219ENST00000617757 SPTLC3Q9NUV7 552 aa8.58□□□□□ -1.04
TARDBP-219ENST00000617757 SPG21Q9NZD8 308 aa8.58□□□□□ -1.04
TARDBP-219ENST00000617757 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.58□□□□□ -1.04
TARDBP-219ENST00000617757 PUF60Q9UHX1 559 aaKnown RBP8.58□□□□□ -1.04
TARDBP-219ENST00000617757 CDH9Q9ULB4 789 aa8.58□□□□□ -1.04
TARDBP-219ENST00000617757 NENFQ9UMX5 172 aa8.58□□□□□ -1.04
TARDBP-219ENST00000617757 PCDHGC3Q9UN70 934 aa8.58□□□□□ -1.04
TARDBP-219ENST00000617757 PCDHB12Q9Y5F1 795 aa8.58□□□□□ -1.04
TARDBP-219ENST00000617757 GREB1Q4ZG55 1949 aa8.58□□□□□ -1.04
TARDBP-219ENST00000617757 MTCL1Q9Y4B5 1905 aaKnown RBP8.58□□□□□ -1.04
TARDBP-219ENST00000617757 SF3B1O75533 1304 aaKnown RBP eCLIP8.57□□□□□ -1.04
TARDBP-219ENST00000617757 GRXCR1A8MXD5 290 aa8.57□□□□□ -1.04
TARDBP-219ENST00000617757 O00370 1275 aa8.57□□□□□ -1.04
TARDBP-219ENST00000617757 ATP2C2O75185 946 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms