RNA–Protein interactions for RNA: ENST00000617270.4

RFX3-212, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFX3, Length 9,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-212ENST00000617270 ADAM30Q9UKF2 790 aa6.25□□□□□ -1.41
RFX3-212ENST00000617270 SMIM31A0A1B0GVY4 71 aa6.25□□□□□ -1.41
RFX3-212ENST00000617270 POLBP06746 335 aa6.25□□□□□ -1.41
RFX3-212ENST00000617270 RARBP10826 455 aa6.25□□□□□ -1.41
RFX3-212ENST00000617270 FCER1AP12319 257 aa6.25□□□□□ -1.41
RFX3-212ENST00000617270 NOS3P29474 1203 aa6.25□□□□□ -1.41
RFX3-212ENST00000617270 MAPKAPK2P49137 400 aa6.25□□□□□ -1.41
RFX3-212ENST00000617270 BYSLQ13895 437 aaKnown RBP6.25□□□□□ -1.41
RFX3-212ENST00000617270 GSTA3Q16772 222 aa6.25□□□□□ -1.41
RFX3-212ENST00000617270 SGSM1Q2NKQ1 1148 aa6.25□□□□□ -1.41
RFX3-212ENST00000617270 PIH1D3Q9NQM4 214 aaKnown RBP6.25□□□□□ -1.41
RFX3-212ENST00000617270 PDP2Q9P2J9 529 aa6.25□□□□□ -1.41
RFX3-212ENST00000617270 SH3BP1Q9Y3L3 701 aa6.25□□□□□ -1.41
RFX3-212ENST00000617270 PFASO15067 1338 aa6.25□□□□□ -1.41
RFX3-212ENST00000617270 GNG14A0A1W2PPG7 69 aa6.25□□□□□ -1.41
RFX3-212ENST00000617270 SAC3D1A6NKF1 404 aa6.25□□□□□ -1.41
RFX3-212ENST00000617270 PHF2O75151 1096 aa6.25□□□□□ -1.41
RFX3-212ENST00000617270 ZCCHC18P0CG32 403 aa6.25□□□□□ -1.41
RFX3-212ENST00000617270 SFNP31947 248 aa6.25□□□□□ -1.41
RFX3-212ENST00000617270 QARSP47897 775 aaKnown RBP6.25□□□□□ -1.41
RFX3-212ENST00000617270 OVGP1Q12889 678 aa6.25□□□□□ -1.41
RFX3-212ENST00000617270 TXNRD1Q16881 649 aa6.25□□□□□ -1.41
RFX3-212ENST00000617270 CCDC144BQ3MJ40 725 aa6.25□□□□□ -1.41
RFX3-212ENST00000617270 PPP2R3CQ969Q6 453 aa6.25□□□□□ -1.41
RFX3-212ENST00000617270 RAD21L1Q9H4I0 556 aa6.25□□□□□ -1.41
RFX3-212ENST00000617270 INTS13Q9NVM9 706 aa6.25□□□□□ -1.41
RFX3-212ENST00000617270 CTNNAL1Q9UBT7 734 aa6.25□□□□□ -1.41
RFX3-212ENST00000617270 HPS5Q9UPZ3 1129 aa6.25□□□□□ -1.41
RFX3-212ENST00000617270 EIF3LQ9Y262 564 aaKnown RBP6.25□□□□□ -1.41
RFX3-212ENST00000617270 TRPC5OSA6NMA1 111 aa6.25□□□□□ -1.41
RFX3-212ENST00000617270 FAM47E-STBD1D6RA91 191 aa6.25□□□□□ -1.41
RFX3-212ENST00000617270 ZBTB22O15209 634 aa6.25□□□□□ -1.41
RFX3-212ENST00000617270 ASNA1O43681 348 aa6.25□□□□□ -1.41
RFX3-212ENST00000617270 ASNSP08243 561 aa6.25□□□□□ -1.41
RFX3-212ENST00000617270 CLTBP09497 229 aa6.25□□□□□ -1.41
RFX3-212ENST00000617270 PDGFRBP09619 1106 aa6.25□□□□□ -1.41
RFX3-212ENST00000617270 SCP2P22307 547 aa6.25□□□□□ -1.41
RFX3-212ENST00000617270 GTF2E2P29084 291 aaKnown RBP6.25□□□□□ -1.41
RFX3-212ENST00000617270 PBLDP30039 288 aaPredicted RBP6.25□□□□□ -1.41
RFX3-212ENST00000617270 RCN1Q15293 331 aa6.25□□□□□ -1.41
RFX3-212ENST00000617270 DUOXA2Q1HG44 320 aa6.25□□□□□ -1.41
RFX3-212ENST00000617270 FAM182BQ5T319 152 aa6.25□□□□□ -1.41
RFX3-212ENST00000617270 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.25□□□□□ -1.41
RFX3-212ENST00000617270 C18orf8Q96DM3 657 aa6.25□□□□□ -1.41
RFX3-212ENST00000617270 XPO6Q96QU8 1125 aaKnown RBP6.25□□□□□ -1.41
RFX3-212ENST00000617270 CYLDQ9NQC7 956 aa6.25□□□□□ -1.41
RFX3-212ENST00000617270 ATP6V1HQ9UI12 483 aa6.25□□□□□ -1.41
RFX3-212ENST00000617270 ZBTB1Q9Y2K1 713 aa6.25□□□□□ -1.41
RFX3-212ENST00000617270 SPACA6W5XKT8 324 aa6.25□□□□□ -1.41
RFX3-212ENST00000617270 EIF3HO15372 352 aaKnown RBP eCLIP6.25□□□□□ -1.41
RFX3-212ENST00000617270 TEX33O43247 280 aa6.25□□□□□ -1.41
RFX3-212ENST00000617270 KRT6AP02538 564 aa6.25□□□□□ -1.41
RFX3-212ENST00000617270 KRT6BP04259 564 aa6.25□□□□□ -1.41
RFX3-212ENST00000617270 KRT6CP48668 564 aa6.25□□□□□ -1.41
RFX3-212ENST00000617270 KYNUQ16719 465 aa6.25□□□□□ -1.41
RFX3-212ENST00000617270 SDE2Q6IQ49 451 aa6.25□□□□□ -1.41
RFX3-212ENST00000617270 PHACTR4Q8IZ21 702 aa6.25□□□□□ -1.41
RFX3-212ENST00000617270 NMD3Q96D46 503 aaKnown RBP6.25□□□□□ -1.41
RFX3-212ENST00000617270 ATF5Q9Y2D1 282 aaPredicted RBP6.25□□□□□ -1.41
RFX3-212ENST00000617270 PCDHGA3Q9Y5H0 932 aa6.25□□□□□ -1.41
RFX3-212ENST00000617270 NPHP3-ACAD11A0A0J9YXS1 232 aa6.25□□□□□ -1.41
RFX3-212ENST00000617270 MAP3K13O43283 966 aa6.25□□□□□ -1.41
RFX3-212ENST00000617270 TRAPPC3O43617 180 aa6.25□□□□□ -1.41
RFX3-212ENST00000617270 IL6P05231 212 aa6.25□□□□□ -1.41
RFX3-212ENST00000617270 VHLP40337 213 aa6.25□□□□□ -1.41
RFX3-212ENST00000617270 SLC1A1P43005 524 aa6.25□□□□□ -1.41
RFX3-212ENST00000617270 NUMBP49757 651 aa6.25□□□□□ -1.41
RFX3-212ENST00000617270 TTC39BQ5VTQ0 682 aaPredicted RBP6.25□□□□□ -1.41
RFX3-212ENST00000617270 EFL1Q7Z2Z2 1120 aaKnown RBP6.25□□□□□ -1.41
RFX3-212ENST00000617270 SPATA4Q8NEY3 305 aa6.25□□□□□ -1.41
RFX3-212ENST00000617270 PACSIN1Q9BY11 444 aa6.25□□□□□ -1.41
RFX3-212ENST00000617270 SMARCAL1Q9NZC9 954 aa6.25□□□□□ -1.41
RFX3-212ENST00000617270 AGAP1Q9UPQ3 857 aa6.25□□□□□ -1.41
RFX3-212ENST00000617270 ADGRG1Q9Y653 693 aa6.25□□□□□ -1.41
RFX3-212ENST00000617270 PRKCBP05771 671 aa6.25□□□□□ -1.41
RFX3-212ENST00000617270 MFSD14CQ5VZR4 134 aa6.25□□□□□ -1.41
RFX3-212ENST00000617270 DHX40Q8IX18 779 aaKnown RBP6.25□□□□□ -1.41
RFX3-212ENST00000617270 B3GALNT2Q8NCR0 500 aa6.25□□□□□ -1.41
RFX3-212ENST00000617270 MOSPD2Q8NHP6 518 aa6.25□□□□□ -1.41
RFX3-212ENST00000617270 MDM1Q8TC05 714 aa6.25□□□□□ -1.41
RFX3-212ENST00000617270 KRT35Q92764 455 aa6.25□□□□□ -1.41
RFX3-212ENST00000617270 E2F7Q96AV8 911 aa6.25□□□□□ -1.41
RFX3-212ENST00000617270 ZNF669Q96BR6 464 aaPredicted RBP6.25□□□□□ -1.41
RFX3-212ENST00000617270 SGSM3Q96HU1 749 aa6.25□□□□□ -1.41
RFX3-212ENST00000617270 CINPQ9BW66 212 aaPredicted RBP6.25□□□□□ -1.41
RFX3-212ENST00000617270 ERAP1Q9NZ08 941 aa6.25□□□□□ -1.41
RFX3-212ENST00000617270 FEM1BQ9UK73 627 aa6.25□□□□□ -1.41
RFX3-212ENST00000617270 VWA5AO00534 786 aa6.24□□□□□ -1.41
RFX3-212ENST00000617270 MYBP10242 640 aa6.24□□□□□ -1.41
RFX3-212ENST00000617270 CYP2C19P33261 490 aa6.24□□□□□ -1.41
RFX3-212ENST00000617270 LAMB3Q13751 1172 aa6.24□□□□□ -1.41
RFX3-212ENST00000617270 PTK6Q13882 451 aa6.24□□□□□ -1.41
RFX3-212ENST00000617270 SNX17Q15036 470 aa6.24□□□□□ -1.41
RFX3-212ENST00000617270 ZCWPW2Q504Y3 356 aa6.24□□□□□ -1.41
RFX3-212ENST00000617270 FAM196AQ6ZSG2 479 aa6.24□□□□□ -1.41
RFX3-212ENST00000617270 PODNQ7Z5L7 613 aa6.24□□□□□ -1.41
RFX3-212ENST00000617270 ARID3BQ8IVW6 561 aaPredicted RBP6.24□□□□□ -1.41
RFX3-212ENST00000617270 SLC35G2Q8TBE7 412 aa6.24□□□□□ -1.41
RFX3-212ENST00000617270 UTP15Q8TED0 518 aaKnown RBP6.24□□□□□ -1.41
RFX3-212ENST00000617270 NSL1Q96IY1 281 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms