RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 KYAT1Q16773 422 aa11.11□□□□□ -0.63
CLTCL1-209ENST00000617103 EAPPQ56P03 285 aaPredicted RBP11.11□□□□□ -0.63
CLTCL1-209ENST00000617103 SNRNP48Q6IEG0 339 aaKnown RBP11.11□□□□□ -0.63
CLTCL1-209ENST00000617103 TMPRSS6Q8IU80 811 aa11.11□□□□□ -0.63
CLTCL1-209ENST00000617103 HDAC7Q8WUI4 952 aa11.11□□□□□ -0.63
CLTCL1-209ENST00000617103 MTMR8Q96EF0 704 aa11.11□□□□□ -0.63
CLTCL1-209ENST00000617103 TNIP3Q96KP6 325 aa11.11□□□□□ -0.63
CLTCL1-209ENST00000617103 FRMD8P1Q9BZ68 369 aaPredicted RBP11.11□□□□□ -0.63
CLTCL1-209ENST00000617103 DNAJC5Q9H3Z4 198 aa11.11□□□□□ -0.63
CLTCL1-209ENST00000617103 SLC8A2Q9UPR5 921 aa11.11□□□□□ -0.63
CLTCL1-209ENST00000617103 ZFYVE16Q7Z3T8 1539 aa11.11□□□□□ -0.63
CLTCL1-209ENST00000617103 A0A1B0GW55 424 aa11.11□□□□□ -0.63
CLTCL1-209ENST00000617103 FOXN3O00409 490 aaPredicted RBP11.11□□□□□ -0.63
CLTCL1-209ENST00000617103 ZNF197O14709 1029 aa11.11□□□□□ -0.63
CLTCL1-209ENST00000617103 TM9SF1O15321 606 aa11.11□□□□□ -0.63
CLTCL1-209ENST00000617103 DUX4L2P0CJ85 424 aa11.11□□□□□ -0.63
CLTCL1-209ENST00000617103 DUX4L3P0CJ86 424 aa11.11□□□□□ -0.63
CLTCL1-209ENST00000617103 DUX4L4P0CJ87 422 aa11.11□□□□□ -0.63
CLTCL1-209ENST00000617103 DUX4L5P0CJ88 424 aa11.11□□□□□ -0.63
CLTCL1-209ENST00000617103 DUX4L6P0CJ89 424 aa11.11□□□□□ -0.63
CLTCL1-209ENST00000617103 DUX4L7P0CJ90 424 aa11.11□□□□□ -0.63
CLTCL1-209ENST00000617103 SERPINB8P50452 374 aa11.11□□□□□ -0.63
CLTCL1-209ENST00000617103 TOB1P50616 345 aaPredicted RBP11.11□□□□□ -0.63
CLTCL1-209ENST00000617103 UBE3AQ05086 875 aa11.11□□□□□ -0.63
CLTCL1-209ENST00000617103 TMC3Q7Z5M5 1100 aa11.11□□□□□ -0.63
CLTCL1-209ENST00000617103 NOP9Q86U38 636 aaKnown RBP11.11□□□□□ -0.63
CLTCL1-209ENST00000617103 SCN4BQ8IWT1 228 aa11.11□□□□□ -0.63
CLTCL1-209ENST00000617103 STK32AQ8WU08 396 aa11.11□□□□□ -0.63
CLTCL1-209ENST00000617103 CASP10Q92851 521 aa11.11□□□□□ -0.63
CLTCL1-209ENST00000617103 MIEF2Q96C03 454 aa11.11□□□□□ -0.63
CLTCL1-209ENST00000617103 NDFIP2Q9NV92 336 aa11.11□□□□□ -0.63
CLTCL1-209ENST00000617103 DUX4Q9UBX2 424 aa11.11□□□□□ -0.63
CLTCL1-209ENST00000617103 CDV3Q9UKY7 258 aaKnown RBP11.11□□□□□ -0.63
CLTCL1-209ENST00000617103 FAM32AQ9Y421 112 aaKnown RBP11.11□□□□□ -0.63
CLTCL1-209ENST00000617103 COPG1Q9Y678 874 aaKnown RBP11.11□□□□□ -0.63
CLTCL1-209ENST00000617103 MYO1GB0I1T2 1018 aa11.1□□□□□ -0.63
CLTCL1-209ENST00000617103 RPS6KA5O75582 802 aa11.1□□□□□ -0.63
CLTCL1-209ENST00000617103 FAM200BP0CF97 657 aa11.1□□□□□ -0.63
CLTCL1-209ENST00000617103 GZMAP12544 262 aa11.1□□□□□ -0.63
CLTCL1-209ENST00000617103 LCP1P13796 627 aa11.1□□□□□ -0.63
CLTCL1-209ENST00000617103 TSPY1Q01534 308 aa11.1□□□□□ -0.63
CLTCL1-209ENST00000617103 TROAPQ12815 778 aa11.1□□□□□ -0.63
CLTCL1-209ENST00000617103 MSL3Q8N5Y2 521 aaKnown RBP11.1□□□□□ -0.63
CLTCL1-209ENST00000617103 TRAPPC9Q96Q05 1148 aa11.1□□□□□ -0.63
CLTCL1-209ENST00000617103 FAM192AQ9GZU8 254 aa11.1□□□□□ -0.63
CLTCL1-209ENST00000617103 BRD8Q9H0E9 1235 aa11.1□□□□□ -0.63
CLTCL1-209ENST00000617103 NEUROG2Q9H2A3 272 aa11.1□□□□□ -0.63
CLTCL1-209ENST00000617103 TDRD3Q9H7E2 651 aaKnown RBP11.1□□□□□ -0.63
CLTCL1-209ENST00000617103 ZNF556Q9HAH1 456 aa11.1□□□□□ -0.63
CLTCL1-209ENST00000617103 SNX13Q9Y5W8 968 aa11.1□□□□□ -0.63
CLTCL1-209ENST00000617103 ZSCAN5CA6NGD5 496 aaPredicted RBP11.1□□□□□ -0.63
CLTCL1-209ENST00000617103 ZNF839A8K0R7 811 aa11.1□□□□□ -0.63
CLTCL1-209ENST00000617103 DFFAO00273 331 aa11.1□□□□□ -0.63
CLTCL1-209ENST00000617103 GYS1P13807 737 aa11.1□□□□□ -0.63
CLTCL1-209ENST00000617103 ELF3P78545 371 aaPredicted RBP11.1□□□□□ -0.63
CLTCL1-209ENST00000617103 PDK1Q15118 436 aa11.1□□□□□ -0.63
CLTCL1-209ENST00000617103 TAS2R42Q7RTR8 314 aa11.1□□□□□ -0.63
CLTCL1-209ENST00000617103 LDHDQ86WU2 507 aa11.1□□□□□ -0.63
CLTCL1-209ENST00000617103 DAGLBQ8NCG7 672 aa11.1□□□□□ -0.63
CLTCL1-209ENST00000617103 FBXO36Q8NEA4 188 aa11.1□□□□□ -0.63
CLTCL1-209ENST00000617103 RFWD2Q8NHY2 731 aa11.1□□□□□ -0.63
CLTCL1-209ENST00000617103 CALML6Q8TD86 181 aa11.1□□□□□ -0.63
CLTCL1-209ENST00000617103 OTUB1Q96FW1 271 aaPredicted RBP11.1□□□□□ -0.63
CLTCL1-209ENST00000617103 PGM2Q96G03 612 aa11.1□□□□□ -0.63
CLTCL1-209ENST00000617103 PLEKHA5Q9HAU0 1116 aa11.1□□□□□ -0.63
CLTCL1-209ENST00000617103 IL1RL2Q9HB29 575 aa11.1□□□□□ -0.63
CLTCL1-209ENST00000617103 NAALADL1Q9UQQ1 740 aa11.1□□□□□ -0.63
CLTCL1-209ENST00000617103 FKBP9O95302 570 aa11.1□□□□□ -0.63
CLTCL1-209ENST00000617103 DLGAP3O95886 979 aa11.1□□□□□ -0.63
CLTCL1-209ENST00000617103 FDX1P10109 184 aa11.1□□□□□ -0.63
CLTCL1-209ENST00000617103 FKBP9P1Q75LS8 142 aa11.1□□□□□ -0.63
CLTCL1-209ENST00000617103 CCDC60Q8IWA6 550 aaPredicted RBP11.1□□□□□ -0.63
CLTCL1-209ENST00000617103 ZNF669Q96BR6 464 aaPredicted RBP11.1□□□□□ -0.63
CLTCL1-209ENST00000617103 KIF12Q96FN5 646 aa11.1□□□□□ -0.63
CLTCL1-209ENST00000617103 VPS50Q96JG6 964 aa11.1□□□□□ -0.63
CLTCL1-209ENST00000617103 PAFAH2Q99487 392 aa11.1□□□□□ -0.63
CLTCL1-209ENST00000617103 HOXC10Q9NYD6 342 aa11.1□□□□□ -0.63
CLTCL1-209ENST00000617103 DCDC2Q9UHG0 476 aa11.1□□□□□ -0.63
CLTCL1-209ENST00000617103 GGA2Q9UJY4 613 aa11.1□□□□□ -0.63
CLTCL1-209ENST00000617103 PBRM1Q86U86 1689 aa11.1□□□□□ -0.63
CLTCL1-209ENST00000617103 E2F8A0AVK6 867 aa11.1□□□□□ -0.63
CLTCL1-209ENST00000617103 SRRM3A6NNA2 597 aaPredicted RBP11.1□□□□□ -0.63
CLTCL1-209ENST00000617103 CES2O00748 559 aa11.1□□□□□ -0.63
CLTCL1-209ENST00000617103 FAM153BP0C7A2 387 aa11.1□□□□□ -0.63
CLTCL1-209ENST00000617103 MLH1P40692 756 aa11.1□□□□□ -0.63
CLTCL1-209ENST00000617103 ALDH5A1P51649 535 aaPredicted RBP11.1□□□□□ -0.63
CLTCL1-209ENST00000617103 ERVK-9P63128 1117 aa11.1□□□□□ -0.63
CLTCL1-209ENST00000617103 ZNF235Q14590 738 aa11.1□□□□□ -0.63
CLTCL1-209ENST00000617103 SMTNL2Q2TAL5 461 aa11.1□□□□□ -0.63
CLTCL1-209ENST00000617103 FAM153CQ494X1 144 aa11.1□□□□□ -0.63
CLTCL1-209ENST00000617103 EPC2Q52LR7 807 aa11.1□□□□□ -0.63
CLTCL1-209ENST00000617103 EFL1Q7Z2Z2 1120 aaKnown RBP11.1□□□□□ -0.63
CLTCL1-209ENST00000617103 ZNF560Q96MR9 790 aa11.1□□□□□ -0.63
CLTCL1-209ENST00000617103 BTBD10Q9BSF8 475 aa11.1□□□□□ -0.63
CLTCL1-209ENST00000617103 TLR10Q9BXR5 811 aa11.1□□□□□ -0.63
CLTCL1-209ENST00000617103 BTBD7Q9P203 1132 aa11.1□□□□□ -0.63
CLTCL1-209ENST00000617103 SLC39A10Q9ULF5 831 aa11.1□□□□□ -0.63
CLTCL1-209ENST00000617103 SOX13Q9UN79 622 aa11.1□□□□□ -0.63
CLTCL1-209ENST00000617103 TMEM94Q12767 1356 aa11.1□□□□□ -0.63
CLTCL1-209ENST00000617103 CCDC78A2IDD5 438 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms