RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 MLH1P40692 756 aa8.27□□□□□ -1.09
NEK3-207ENST00000617054 RGS7P49802 495 aa8.27□□□□□ -1.09
NEK3-207ENST00000617054 TAS2R40P59535 323 aa8.27□□□□□ -1.09
NEK3-207ENST00000617054 MRPS6P82932 125 aaKnown RBP8.27□□□□□ -1.09
NEK3-207ENST00000617054 OGDHQ02218 1023 aa8.27□□□□□ -1.09
NEK3-207ENST00000617054 QPCTQ16769 361 aa8.27□□□□□ -1.09
NEK3-207ENST00000617054 DCAF4L1Q3SXM0 396 aa8.27□□□□□ -1.09
NEK3-207ENST00000617054 PTPN20Q4JDL3 420 aa8.27□□□□□ -1.09
NEK3-207ENST00000617054 PAN2Q504Q3 1202 aaKnown RBP8.27□□□□□ -1.09
NEK3-207ENST00000617054 TXNRD3NBQ6F5E7 133 aa8.27□□□□□ -1.09
NEK3-207ENST00000617054 ALKAL1Q6UXT8 129 aa8.27□□□□□ -1.09
NEK3-207ENST00000617054 ERICH1Q86X53 443 aa8.27□□□□□ -1.09
NEK3-207ENST00000617054 ZNF677Q86XU0 584 aa8.27□□□□□ -1.09
NEK3-207ENST00000617054 SH3TC2Q8TF17 1288 aa8.27□□□□□ -1.09
NEK3-207ENST00000617054 TMEM176AQ96HP8 235 aa8.27□□□□□ -1.09
NEK3-207ENST00000617054 PBKQ96KB5 322 aa8.27□□□□□ -1.09
NEK3-207ENST00000617054 FAM81BQ96LP2 452 aa8.27□□□□□ -1.09
NEK3-207ENST00000617054 PAAF1Q9BRP4 392 aa8.27□□□□□ -1.09
NEK3-207ENST00000617054 HERPUD2Q9BSE4 406 aa8.27□□□□□ -1.09
NEK3-207ENST00000617054 MIOSQ9NXC5 875 aa8.27□□□□□ -1.09
NEK3-207ENST00000617054 SRRDQ9UH36 339 aa8.27□□□□□ -1.09
NEK3-207ENST00000617054 C2CD2Q9Y426 696 aa8.27□□□□□ -1.09
NEK3-207ENST00000617054 TIMM13Q9Y5L4 95 aaPredicted RBP8.27□□□□□ -1.09
NEK3-207ENST00000617054 PI4K2BG5E9Z4 385 aa8.27□□□□□ -1.09
NEK3-207ENST00000617054 TTI1O43156 1089 aa8.27□□□□□ -1.09
NEK3-207ENST00000617054 FAM153BP0C7A2 387 aa8.27□□□□□ -1.09
NEK3-207ENST00000617054 MMP8P22894 467 aa8.27□□□□□ -1.09
NEK3-207ENST00000617054 KCNJ1P48048 391 aa8.27□□□□□ -1.09
NEK3-207ENST00000617054 PTPN11Q06124 597 aaPredicted RBP8.27□□□□□ -1.09
NEK3-207ENST00000617054 FAM153CQ494X1 144 aa8.27□□□□□ -1.09
NEK3-207ENST00000617054 RAB6CQ53S08 254 aa8.27□□□□□ -1.09
NEK3-207ENST00000617054 ZFYVE27Q5T4F4 411 aa8.27□□□□□ -1.09
NEK3-207ENST00000617054 C9orf57Q5W0N0 161 aa8.27□□□□□ -1.09
NEK3-207ENST00000617054 CCNI2Q6ZMN8 369 aaPredicted RBP8.27□□□□□ -1.09
NEK3-207ENST00000617054 ANKS1BQ7Z6G8 1248 aa8.27□□□□□ -1.09
NEK3-207ENST00000617054 OR6B3Q8NGW1 331 aa8.27□□□□□ -1.09
NEK3-207ENST00000617054 CD101Q93033 1021 aa8.27□□□□□ -1.09
NEK3-207ENST00000617054 PIWIL1Q96J94 861 aaKnown RBP8.27□□□□□ -1.09
NEK3-207ENST00000617054 HHIPL1Q96JK4 782 aa8.27□□□□□ -1.09
NEK3-207ENST00000617054 GAD1Q99259 594 aa8.27□□□□□ -1.09
NEK3-207ENST00000617054 RAB6CQ9H0N0 254 aa8.27□□□□□ -1.09
NEK3-207ENST00000617054 TRPV6Q9H1D0 765 aa8.27□□□□□ -1.09
NEK3-207ENST00000617054 FAM153AQ9UHL3 310 aa8.27□□□□□ -1.09
NEK3-207ENST00000617054 NFU1Q9UMS0 254 aa8.27□□□□□ -1.09
NEK3-207ENST00000617054 NOD1Q9Y239 953 aa8.27□□□□□ -1.09
NEK3-207ENST00000617054 M0QYV0 167 aa8.26□□□□□ -1.09
NEK3-207ENST00000617054 MGEA5O60502 916 aa8.26□□□□□ -1.09
NEK3-207ENST00000617054 MICAL2O94851 1124 aa8.26□□□□□ -1.09
NEK3-207ENST00000617054 PLA2G4AP47712 749 aa8.26□□□□□ -1.09
NEK3-207ENST00000617054 PDE4CQ08493 712 aa8.26□□□□□ -1.09
NEK3-207ENST00000617054 ZBTB6Q15916 424 aa8.26□□□□□ -1.09
NEK3-207ENST00000617054 SOWAHAQ2M3V2 549 aa8.26□□□□□ -1.09
NEK3-207ENST00000617054 PPP1R26Q5T8A7 1209 aaPredicted RBP8.26□□□□□ -1.09
NEK3-207ENST00000617054 JOSD2Q8TAC2 188 aa8.26□□□□□ -1.09
NEK3-207ENST00000617054 ACTRT1Q8TDG2 376 aa8.26□□□□□ -1.09
NEK3-207ENST00000617054 C18orf8Q96DM3 657 aa8.26□□□□□ -1.09
NEK3-207ENST00000617054 RPGRIP1Q96KN7 1286 aa8.26□□□□□ -1.09
NEK3-207ENST00000617054 TRIM51Q9BSJ1 452 aa8.26□□□□□ -1.09
NEK3-207ENST00000617054 SYNCQ9H7C4 482 aa8.26□□□□□ -1.09
NEK3-207ENST00000617054 STIM2Q9P246 746 aa8.26□□□□□ -1.09
NEK3-207ENST00000617054 UVRAGQ9P2Y5 699 aa8.26□□□□□ -1.09
NEK3-207ENST00000617054 ITGA11Q9UKX5 1188 aa8.26□□□□□ -1.09
NEK3-207ENST00000617054 L1RE1Q9UN81 338 aa8.26□□□□□ -1.09
NEK3-207ENST00000617054 PTPN22Q9Y2R2 807 aa8.26□□□□□ -1.09
NEK3-207ENST00000617054 I3L4J1 428 aa8.26□□□□□ -1.09
NEK3-207ENST00000617054 M0QZ92 97 aa8.26□□□□□ -1.09
NEK3-207ENST00000617054 PTGESO14684 152 aa8.26□□□□□ -1.09
NEK3-207ENST00000617054 ATP2C2O75185 946 aa8.26□□□□□ -1.09
NEK3-207ENST00000617054 ERBB2P04626 1255 aa8.26□□□□□ -1.09
NEK3-207ENST00000617054 FGFR1P11362 822 aa8.26□□□□□ -1.09
NEK3-207ENST00000617054 HOXC8P31273 242 aa8.26□□□□□ -1.09
NEK3-207ENST00000617054 RFC1P35251 1148 aaPredicted RBP8.26□□□□□ -1.09
NEK3-207ENST00000617054 GYS2P54840 703 aa8.26□□□□□ -1.09
NEK3-207ENST00000617054 FAM193AP78312 1265 aa8.26□□□□□ -1.09
NEK3-207ENST00000617054 ZNF252P-AS1Q0IIN9 211 aa8.26□□□□□ -1.09
NEK3-207ENST00000617054 SNX1Q13596 522 aa8.26□□□□□ -1.09
NEK3-207ENST00000617054 ITGA7Q13683 1181 aa8.26□□□□□ -1.09
NEK3-207ENST00000617054 BRD3Q15059 726 aa8.26□□□□□ -1.09
NEK3-207ENST00000617054 TAF5Q15542 800 aa8.26□□□□□ -1.09
NEK3-207ENST00000617054 KCNT1Q5JUK3 1230 aa8.26□□□□□ -1.09
NEK3-207ENST00000617054 C11orf63Q6NUN7 778 aa8.26□□□□□ -1.09
NEK3-207ENST00000617054 DCUN1D2Q6PH85 259 aa8.26□□□□□ -1.09
NEK3-207ENST00000617054 ZNF572Q7Z3I7 529 aaPredicted RBP8.26□□□□□ -1.09
NEK3-207ENST00000617054 TMEM35BQ8NCS4 154 aa8.26□□□□□ -1.09
NEK3-207ENST00000617054 HASPINQ8TF76 798 aa8.26□□□□□ -1.09
NEK3-207ENST00000617054 ZNF296Q8WUU4 475 aaPredicted RBP8.26□□□□□ -1.09
NEK3-207ENST00000617054 DPH5Q9H2P9 285 aa8.26□□□□□ -1.09
NEK3-207ENST00000617054 TMEM59LQ9UK28 342 aa8.26□□□□□ -1.09
NEK3-207ENST00000617054 PADI3Q9ULW8 664 aa8.26□□□□□ -1.09
NEK3-207ENST00000617054 SCN10AQ9Y5Y9 1956 aa8.25□□□□□ -1.09
NEK3-207ENST00000617054 ACAT1P24752 427 aaKnown RBP8.25□□□□□ -1.09
NEK3-207ENST00000617054 APLP1P51693 650 aa8.25□□□□□ -1.09
NEK3-207ENST00000617054 MYO1EQ12965 1108 aa8.25□□□□□ -1.09
NEK3-207ENST00000617054 SMTNL2Q2TAL5 461 aa8.25□□□□□ -1.09
NEK3-207ENST00000617054 SH3PXD2AQ5TCZ1 1133 aa8.25□□□□□ -1.09
NEK3-207ENST00000617054 LIN9Q5TKA1 542 aa8.25□□□□□ -1.09
NEK3-207ENST00000617054 CCSAPQ6IQ19 270 aaPredicted RBP8.25□□□□□ -1.09
NEK3-207ENST00000617054 WDR93Q6P2C0 686 aa8.25□□□□□ -1.09
NEK3-207ENST00000617054 PHF13Q86YI8 300 aaPredicted RBP8.25□□□□□ -1.09
NEK3-207ENST00000617054 CCDC50Q8IVM0 306 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms