RNA–Protein interactions for RNA: ENST00000617024.1

SPTSSB-204, Transcript of serine palmitoyltransferase small subunit B, humanhuman

BASIC

Gene SPTSSB, Length 1,292 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSB-204ENST00000617024 NT5C1BQ96P26 610 aa17.53■□□□□ 0.4
SPTSSB-204ENST00000617024 CDCA3Q99618 268 aaPredicted RBP17.53■□□□□ 0.4
SPTSSB-204ENST00000617024 MRPL45Q9BRJ2 306 aaKnown RBP17.53■□□□□ 0.4
SPTSSB-204ENST00000617024 NIF3L1Q9GZT8 377 aa17.53■□□□□ 0.4
SPTSSB-204ENST00000617024 INTS2Q9H0H0 1204 aaKnown RBP17.53■□□□□ 0.4
SPTSSB-204ENST00000617024 IGFLR1Q9H665 355 aa17.53■□□□□ 0.4
SPTSSB-204ENST00000617024 CYP3A43Q9HB55 503 aa17.53■□□□□ 0.4
SPTSSB-204ENST00000617024 DDX43Q9NXZ2 648 aaKnown RBP17.53■□□□□ 0.4
SPTSSB-204ENST00000617024 GCNT4Q9P109 453 aa17.53■□□□□ 0.4
SPTSSB-204ENST00000617024 FBXL5Q9UKA1 691 aa17.53■□□□□ 0.4
SPTSSB-204ENST00000617024 ATG2AQ2TAZ0 1938 aa17.53■□□□□ 0.4
SPTSSB-204ENST00000617024 MYO7AQ13402 2215 aa17.52■□□□□ 0.4
SPTSSB-204ENST00000617024 GABRDO14764 452 aa17.52■□□□□ 0.4
SPTSSB-204ENST00000617024 CLASP2O75122 1294 aaKnown RBP17.52■□□□□ 0.4
SPTSSB-204ENST00000617024 SERPINC1P01008 464 aa17.52■□□□□ 0.4
SPTSSB-204ENST00000617024 WEE2P0C1S8 567 aa17.52■□□□□ 0.4
SPTSSB-204ENST00000617024 SLC9A1P19634 815 aa17.52■□□□□ 0.4
SPTSSB-204ENST00000617024 KCNA5P22460 613 aa17.52■□□□□ 0.4
SPTSSB-204ENST00000617024 ARPP19P56211 112 aa17.52■□□□□ 0.4
SPTSSB-204ENST00000617024 DUSP6Q16828 381 aa17.52■□□□□ 0.4
SPTSSB-204ENST00000617024 RSPO2Q6UXX9 243 aaPredicted RBP17.52■□□□□ 0.4
SPTSSB-204ENST00000617024 SCARA5Q6ZMJ2 495 aa17.52■□□□□ 0.4
SPTSSB-204ENST00000617024 PALB2Q86YC2 1186 aa17.52■□□□□ 0.4
SPTSSB-204ENST00000617024 RNF214Q8ND24 703 aa17.52■□□□□ 0.4
SPTSSB-204ENST00000617024 ACBD6Q9BR61 282 aa17.52■□□□□ 0.4
SPTSSB-204ENST00000617024 BCO2Q9BYV7 579 aa17.52■□□□□ 0.4
SPTSSB-204ENST00000617024 SMYD3Q9H7B4 428 aa17.52■□□□□ 0.4
SPTSSB-204ENST00000617024 CDY1Q9Y6F8 540 aa17.52■□□□□ 0.4
SPTSSB-204ENST00000617024 FSD2A1L4K1 749 aa17.51■□□□□ 0.39
SPTSSB-204ENST00000617024 ADAM12O43184 909 aa17.51■□□□□ 0.39
SPTSSB-204ENST00000617024 NCK2O43639 380 aa17.51■□□□□ 0.39
SPTSSB-204ENST00000617024 PDGFRBP09619 1106 aa17.51■□□□□ 0.39
SPTSSB-204ENST00000617024 TBXAS1P24557 533 aaPredicted RBP17.51■□□□□ 0.39
SPTSSB-204ENST00000617024 PON1P27169 355 aa17.51■□□□□ 0.39
SPTSSB-204ENST00000617024 PCSK1P29120 753 aa17.51■□□□□ 0.39
SPTSSB-204ENST00000617024 ASPAP45381 313 aa17.51■□□□□ 0.39
SPTSSB-204ENST00000617024 RAP1GAPP47736 663 aa17.51■□□□□ 0.39
SPTSSB-204ENST00000617024 MRE11P49959 708 aa17.51■□□□□ 0.39
SPTSSB-204ENST00000617024 UBXN1Q04323 297 aa17.51■□□□□ 0.39
SPTSSB-204ENST00000617024 HYAL1Q12794 435 aa17.51■□□□□ 0.39
SPTSSB-204ENST00000617024 RAB33AQ14088 237 aa17.51■□□□□ 0.39
SPTSSB-204ENST00000617024 SLC8B1Q6J4K2 584 aa17.51■□□□□ 0.39
SPTSSB-204ENST00000617024 APTXQ7Z2E3 356 aaKnown RBP17.51■□□□□ 0.39
SPTSSB-204ENST00000617024 OSTM1Q86WC4 334 aa17.51■□□□□ 0.39
SPTSSB-204ENST00000617024 TTC39CQ8N584 583 aa17.51■□□□□ 0.39
SPTSSB-204ENST00000617024 KBTBD7Q8WVZ9 684 aa17.51■□□□□ 0.39
SPTSSB-204ENST00000617024 CFAP54Q96N23 3096 aa17.51■□□□□ 0.39
SPTSSB-204ENST00000617024 RTP3Q9BQQ7 232 aa17.51■□□□□ 0.39
SPTSSB-204ENST00000617024 SDCBP2Q9H190 292 aa17.51■□□□□ 0.39
SPTSSB-204ENST00000617024 LGALS16A8MUM7 142 aa17.5■□□□□ 0.39
SPTSSB-204ENST00000617024 C1RP00736 705 aa17.5■□□□□ 0.39
SPTSSB-204ENST00000617024 LMO2P25791 158 aa17.5■□□□□ 0.39
SPTSSB-204ENST00000617024 YWHAEP62258 255 aaKnown RBP17.5■□□□□ 0.39
SPTSSB-204ENST00000617024 FANCCQ00597 558 aa17.5■□□□□ 0.39
SPTSSB-204ENST00000617024 TSPY1Q01534 308 aa17.5■□□□□ 0.39
SPTSSB-204ENST00000617024 KCNMA1Q12791 1236 aa17.5■□□□□ 0.39
SPTSSB-204ENST00000617024 CUL2Q13617 745 aa17.5■□□□□ 0.39
SPTSSB-204ENST00000617024 TRIM65Q6PJ69 517 aa17.5■□□□□ 0.39
SPTSSB-204ENST00000617024 DCP1BQ8IZD4 617 aaKnown RBP17.5■□□□□ 0.39
SPTSSB-204ENST00000617024 PPM1KQ8N3J5 372 aa17.5■□□□□ 0.39
SPTSSB-204ENST00000617024 RTN4Q9NQC3 1192 aaKnown RBP17.5■□□□□ 0.39
SPTSSB-204ENST00000617024 A8MXQ7 604 aa17.49■□□□□ 0.39
SPTSSB-204ENST00000617024 CPB1P15086 417 aa17.49■□□□□ 0.39
SPTSSB-204ENST00000617024 SSTR3P32745 418 aaPredicted RBP17.49■□□□□ 0.39
SPTSSB-204ENST00000617024 GTF2F1P35269 517 aaKnown RBP eCLIP17.49■□□□□ 0.39
SPTSSB-204ENST00000617024 CLCN4P51793 760 aa17.49■□□□□ 0.39
SPTSSB-204ENST00000617024 NHLH1Q02575 133 aa17.49■□□□□ 0.39
SPTSSB-204ENST00000617024 TPGS2Q68CL5 300 aa17.49■□□□□ 0.39
SPTSSB-204ENST00000617024 PTCRAQ6ISU1 281 aaPredicted RBP17.49■□□□□ 0.39
SPTSSB-204ENST00000617024 PHLDB3Q6NSJ2 640 aa17.49■□□□□ 0.39
SPTSSB-204ENST00000617024 RRAGAQ7L523 313 aa17.49■□□□□ 0.39
SPTSSB-204ENST00000617024 UNC93AQ86WB7 457 aa17.49■□□□□ 0.39
SPTSSB-204ENST00000617024 EFHBQ8N7U6 833 aa17.49■□□□□ 0.39
SPTSSB-204ENST00000617024 OR10T2Q8NGX3 314 aa17.49■□□□□ 0.39
SPTSSB-204ENST00000617024 ZNF461Q8TAF7 563 aa17.49■□□□□ 0.39
SPTSSB-204ENST00000617024 SLC22A17Q8WUG5 538 aa17.49■□□□□ 0.39
SPTSSB-204ENST00000617024 FAM81BQ96LP2 452 aa17.49■□□□□ 0.39
SPTSSB-204ENST00000617024 NAP1L5Q96NT1 182 aaPredicted RBP17.49■□□□□ 0.39
SPTSSB-204ENST00000617024 TMEM209Q96SK2 561 aa17.49■□□□□ 0.39
SPTSSB-204ENST00000617024 DNAI2Q9GZS0 605 aa17.49■□□□□ 0.39
SPTSSB-204ENST00000617024 ZCWPW1Q9H0M4 648 aa17.49■□□□□ 0.39
SPTSSB-204ENST00000617024 FAM124BQ9H5Z6 455 aaPredicted RBP17.49■□□□□ 0.39
SPTSSB-204ENST00000617024 UBE2TQ9NPD8 197 aaPredicted RBP17.49■□□□□ 0.39
SPTSSB-204ENST00000617024 DPP7Q9UHL4 492 aa17.49■□□□□ 0.39
SPTSSB-204ENST00000617024 CDH9Q9ULB4 789 aa17.49■□□□□ 0.39
SPTSSB-204ENST00000617024 BARX2Q9UMQ3 279 aaPredicted RBP17.49■□□□□ 0.39
SPTSSB-204ENST00000617024 GRXCR2A6NFK2 248 aa17.48■□□□□ 0.39
SPTSSB-204ENST00000617024 TGM5O43548 720 aa17.48■□□□□ 0.39
SPTSSB-204ENST00000617024 ABLIM3O94929 683 aa17.48■□□□□ 0.39
SPTSSB-204ENST00000617024 GLUD1P00367 558 aa17.48■□□□□ 0.39
SPTSSB-204ENST00000617024 OR4Q2P0C623 313 aa17.48■□□□□ 0.39
SPTSSB-204ENST00000617024 CD58P19256 250 aa17.48■□□□□ 0.39
SPTSSB-204ENST00000617024 ACAT1P24752 427 aaKnown RBP17.48■□□□□ 0.39
SPTSSB-204ENST00000617024 NDST1P52848 882 aa17.48■□□□□ 0.39
SPTSSB-204ENST00000617024 MFAP3P55082 362 aa17.48■□□□□ 0.39
SPTSSB-204ENST00000617024 UBASH3AP57075 661 aa17.48■□□□□ 0.39
SPTSSB-204ENST00000617024 ROR1Q01973 937 aa17.48■□□□□ 0.39
SPTSSB-204ENST00000617024 GCNT1Q02742 428 aa17.48■□□□□ 0.39
SPTSSB-204ENST00000617024 GPR17Q13304 367 aa17.48■□□□□ 0.39
SPTSSB-204ENST00000617024 ADAM15Q13444 863 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms