RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 CFAP73A6NFT4 308 aa5.92□□□□□ -1.46
SYNCRIP-204ENST00000616122 SLC25A27O95847 323 aa5.92□□□□□ -1.46
SYNCRIP-204ENST00000616122 RARBP10826 455 aa5.92□□□□□ -1.46
SYNCRIP-204ENST00000616122 ARFIP2P53365 341 aa5.92□□□□□ -1.46
SYNCRIP-204ENST00000616122 TNFAIP2Q03169 654 aa5.92□□□□□ -1.46
SYNCRIP-204ENST00000616122 R3HDM1Q15032 1099 aaKnown RBP5.92□□□□□ -1.46
SYNCRIP-204ENST00000616122 EFCAB12Q6NXP0 572 aa5.92□□□□□ -1.46
SYNCRIP-204ENST00000616122 PAXIP1Q6ZW49 1069 aaPredicted RBP5.92□□□□□ -1.46
SYNCRIP-204ENST00000616122 EXOC3L1Q86VI1 746 aa5.92□□□□□ -1.46
SYNCRIP-204ENST00000616122 ZNF354CQ86Y25 554 aa5.92□□□□□ -1.46
SYNCRIP-204ENST00000616122 WDR75Q8IWA0 830 aaKnown RBP5.92□□□□□ -1.46
SYNCRIP-204ENST00000616122 LMNTD2Q8IXW0 634 aa5.92□□□□□ -1.46
SYNCRIP-204ENST00000616122 ASAP3Q8TDY4 903 aa5.92□□□□□ -1.46
SYNCRIP-204ENST00000616122 DCLK3Q9C098 648 aa5.92□□□□□ -1.46
SYNCRIP-204ENST00000616122 SLC5A4Q9NY91 659 aa5.92□□□□□ -1.46
SYNCRIP-204ENST00000616122 RNF181Q9P0P0 153 aa5.92□□□□□ -1.46
SYNCRIP-204ENST00000616122 ZC3H7BQ9UGR2 993 aaKnown RBP5.92□□□□□ -1.46
SYNCRIP-204ENST00000616122 PNMA3Q9UL41 463 aa5.92□□□□□ -1.46
SYNCRIP-204ENST00000616122 AHCTF1Q8WYP5 2266 aa5.92□□□□□ -1.46
SYNCRIP-204ENST00000616122 ASB14A6NK59 587 aa5.92□□□□□ -1.46
SYNCRIP-204ENST00000616122 SPDYE16A6NNV3 312 aaPredicted RBP5.92□□□□□ -1.46
SYNCRIP-204ENST00000616122 PSTPIP1O43586 416 aa5.92□□□□□ -1.46
SYNCRIP-204ENST00000616122 ZSCAN5DPP0CG00 497 aa5.92□□□□□ -1.46
SYNCRIP-204ENST00000616122 CXCL8P10145 99 aa5.92□□□□□ -1.46
SYNCRIP-204ENST00000616122 INSRRP14616 1297 aa5.92□□□□□ -1.46
SYNCRIP-204ENST00000616122 EIF4BP23588 611 aaKnown RBP5.92□□□□□ -1.46
SYNCRIP-204ENST00000616122 SSTR1P30872 391 aa5.92□□□□□ -1.46
SYNCRIP-204ENST00000616122 MMP13P45452 471 aa5.92□□□□□ -1.46
SYNCRIP-204ENST00000616122 FAXCQ5TGI0 409 aa5.92□□□□□ -1.46
SYNCRIP-204ENST00000616122 YTHDF3Q7Z739 585 aaKnown RBP5.92□□□□□ -1.46
SYNCRIP-204ENST00000616122 ALKBH8Q96BT7 664 aaKnown RBP5.92□□□□□ -1.46
SYNCRIP-204ENST00000616122 HPDLQ96IR7 371 aa5.92□□□□□ -1.46
SYNCRIP-204ENST00000616122 FBXL18Q96ME1 805 aa5.92□□□□□ -1.46
SYNCRIP-204ENST00000616122 KIF13AQ9H1H9 1805 aa5.92□□□□□ -1.46
SYNCRIP-204ENST00000616122 ARHGAP42A6NI28 874 aa5.92□□□□□ -1.46
SYNCRIP-204ENST00000616122 DCTN3O75935 186 aa5.92□□□□□ -1.46
SYNCRIP-204ENST00000616122 HAUS5O94927 633 aa5.92□□□□□ -1.46
SYNCRIP-204ENST00000616122 GCLCP48506 637 aaPredicted RBP5.92□□□□□ -1.46
SYNCRIP-204ENST00000616122 SESN2P58004 480 aaPredicted RBP5.92□□□□□ -1.46
SYNCRIP-204ENST00000616122 CAPSQ13938 189 aa5.92□□□□□ -1.46
SYNCRIP-204ENST00000616122 HACE1Q8IYU2 909 aa5.92□□□□□ -1.46
SYNCRIP-204ENST00000616122 FAM71DQ8N9W8 422 aa5.92□□□□□ -1.46
SYNCRIP-204ENST00000616122 MFSD14AQ96MC6 490 aa5.92□□□□□ -1.46
SYNCRIP-204ENST00000616122 FHDC1Q9C0D6 1143 aaPredicted RBP5.92□□□□□ -1.46
SYNCRIP-204ENST00000616122 SNX25Q9H3E2 840 aa5.92□□□□□ -1.46
SYNCRIP-204ENST00000616122 DHX33Q9H6R0 707 aaKnown RBP5.92□□□□□ -1.46
SYNCRIP-204ENST00000616122 STAP1Q9ULZ2 295 aa5.92□□□□□ -1.46
SYNCRIP-204ENST00000616122 RIF1Q5UIP0 2472 aaKnown RBP5.92□□□□□ -1.46
SYNCRIP-204ENST00000616122 A0A087WZ62 844 aa5.91□□□□□ -1.46
SYNCRIP-204ENST00000616122 H3BRB1 525 aa5.91□□□□□ -1.46
SYNCRIP-204ENST00000616122 PIK3R2O00459 728 aa5.91□□□□□ -1.46
SYNCRIP-204ENST00000616122 DYNC1LI2O43237 492 aaPredicted RBP5.91□□□□□ -1.46
SYNCRIP-204ENST00000616122 HUS1O60921 280 aa5.91□□□□□ -1.46
SYNCRIP-204ENST00000616122 PIAS1O75925 651 aa5.91□□□□□ -1.46
SYNCRIP-204ENST00000616122 LSM8O95777 96 aaKnown RBP5.91□□□□□ -1.46
SYNCRIP-204ENST00000616122 ITGB3P05106 788 aa5.91□□□□□ -1.46
SYNCRIP-204ENST00000616122 SLC20A2Q08357 652 aa5.91□□□□□ -1.46
SYNCRIP-204ENST00000616122 TFDP3Q5H9I0 405 aa5.91□□□□□ -1.46
SYNCRIP-204ENST00000616122 LRRC38Q5VT99 294 aa5.91□□□□□ -1.46
SYNCRIP-204ENST00000616122 HEATR6Q6AI08 1181 aaKnown RBP5.91□□□□□ -1.46
SYNCRIP-204ENST00000616122 TWF2Q6IBS0 349 aaKnown RBP5.91□□□□□ -1.46
SYNCRIP-204ENST00000616122 TRIM42Q8IWZ5 723 aa5.91□□□□□ -1.46
SYNCRIP-204ENST00000616122 NDUFAF2Q8N183 169 aa5.91□□□□□ -1.46
SYNCRIP-204ENST00000616122 SIX6OS1Q8N1H7 587 aa5.91□□□□□ -1.46
SYNCRIP-204ENST00000616122 DNERQ8NFT8 737 aa5.91□□□□□ -1.46
SYNCRIP-204ENST00000616122 LMO3Q8TAP4 145 aa5.91□□□□□ -1.46
SYNCRIP-204ENST00000616122 TRIM63Q969Q1 353 aa5.91□□□□□ -1.46
SYNCRIP-204ENST00000616122 MYCBPQ99417 103 aaPredicted RBP5.91□□□□□ -1.46
SYNCRIP-204ENST00000616122 FDXACB1Q9BRP7 624 aaPredicted RBP5.91□□□□□ -1.46
SYNCRIP-204ENST00000616122 CNPY3Q9BT09 278 aa5.91□□□□□ -1.46
SYNCRIP-204ENST00000616122 OSBPL7Q9BZF2 842 aa5.91□□□□□ -1.46
SYNCRIP-204ENST00000616122 TUT1Q9H6E5 874 aaKnown RBP5.91□□□□□ -1.46
SYNCRIP-204ENST00000616122 PSMC3IPQ9P2W1 217 aaPredicted RBP5.91□□□□□ -1.46
SYNCRIP-204ENST00000616122 IRF6O14896 467 aa5.91□□□□□ -1.46
SYNCRIP-204ENST00000616122 DDX3YO15523 660 aaKnown RBP5.91□□□□□ -1.46
SYNCRIP-204ENST00000616122 CREB1P16220 341 aa5.91□□□□□ -1.46
SYNCRIP-204ENST00000616122 SCTRP47872 440 aa5.91□□□□□ -1.46
SYNCRIP-204ENST00000616122 SPOCD1Q6ZMY3 1216 aa5.91□□□□□ -1.46
SYNCRIP-204ENST00000616122 BBS12Q6ZW61 710 aa5.91□□□□□ -1.46
SYNCRIP-204ENST00000616122 CCDC125Q86Z20 511 aa5.91□□□□□ -1.46
SYNCRIP-204ENST00000616122 ZC3H3Q8IXZ2 948 aaKnown RBP5.91□□□□□ -1.46
SYNCRIP-204ENST00000616122 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.91□□□□□ -1.46
SYNCRIP-204ENST00000616122 BORCS6Q96GS4 357 aa5.91□□□□□ -1.46
SYNCRIP-204ENST00000616122 ACAP3Q96P50 834 aa5.91□□□□□ -1.46
SYNCRIP-204ENST00000616122 NINJ2Q9NZG7 142 aa5.91□□□□□ -1.46
SYNCRIP-204ENST00000616122 SAE1Q9UBE0 346 aaPredicted RBP5.91□□□□□ -1.46
SYNCRIP-204ENST00000616122 SPEF2Q9C093 1822 aa5.91□□□□□ -1.46
SYNCRIP-204ENST00000616122 SAT1P21673 171 aa5.91□□□□□ -1.46
SYNCRIP-204ENST00000616122 SLC26A2P50443 739 aa5.91□□□□□ -1.46
SYNCRIP-204ENST00000616122 STILQ15468 1287 aa5.91□□□□□ -1.46
SYNCRIP-204ENST00000616122 TDRD10Q5VZ19 366 aaKnown RBP5.91□□□□□ -1.46
SYNCRIP-204ENST00000616122 PARP9Q8IXQ6 854 aa5.91□□□□□ -1.46
SYNCRIP-204ENST00000616122 LBHD1Q9BQE6 289 aaPredicted RBP5.91□□□□□ -1.46
SYNCRIP-204ENST00000616122 PPCSQ9HAB8 311 aa5.91□□□□□ -1.46
SYNCRIP-204ENST00000616122 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.91□□□□□ -1.46
SYNCRIP-204ENST00000616122 TMEM191CA6NGB0 347 aa5.91□□□□□ -1.46
SYNCRIP-204ENST00000616122 TRIM49D1C9J1S8 452 aa5.91□□□□□ -1.46
SYNCRIP-204ENST00000616122 SMAPO00193 183 aa5.91□□□□□ -1.46
SYNCRIP-204ENST00000616122 DNALI1O14645 258 aaPredicted RBP5.91□□□□□ -1.46
SYNCRIP-204ENST00000616122 LZTS3O60299 673 aaPredicted RBP5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms