RNA–Protein interactions for RNA: ENST00000615671.1

GABPB1-212, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

Gene GABPB1, Length 6,266 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-212ENST00000615671 TCEA2Q15560 299 aa19.5■□□□□ 0.71
GABPB1-212ENST00000615671 FBXO32Q969P5 355 aa19.5■□□□□ 0.71
GABPB1-212ENST00000615671 PQBP1O60828 265 aaKnown RBP19.5■□□□□ 0.71
GABPB1-212ENST00000615671 EPHB2P29323 1055 aa19.5■□□□□ 0.71
GABPB1-212ENST00000615671 RGS4P49798 205 aa19.5■□□□□ 0.71
GABPB1-212ENST00000615671 PIGHQ14442 188 aaPredicted RBP19.5■□□□□ 0.71
GABPB1-212ENST00000615671 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.5■□□□□ 0.71
GABPB1-212ENST00000615671 AGPAT5Q9NUQ2 364 aa19.5■□□□□ 0.71
GABPB1-212ENST00000615671 AP1G2O75843 785 aa19.5■□□□□ 0.71
GABPB1-212ENST00000615671 CKMP06732 381 aa19.5■□□□□ 0.71
GABPB1-212ENST00000615671 SLC9A1P19634 815 aa19.5■□□□□ 0.71
GABPB1-212ENST00000615671 HDAC4P56524 1084 aa19.5■□□□□ 0.71
GABPB1-212ENST00000615671 MAP3K7CLP57077 242 aa19.5■□□□□ 0.71
GABPB1-212ENST00000615671 ZNF200P98182 395 aaPredicted RBP19.5■□□□□ 0.71
GABPB1-212ENST00000615671 OR2W6PQ8NHA6 318 aa19.5■□□□□ 0.71
GABPB1-212ENST00000615671 STK33Q9BYT3 514 aa19.5■□□□□ 0.71
GABPB1-212ENST00000615671 EHD2Q9NZN4 543 aa19.5■□□□□ 0.71
GABPB1-212ENST00000615671 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.5■□□□□ 0.71
GABPB1-212ENST00000615671 EXTL3O43909 919 aa19.5■□□□□ 0.71
GABPB1-212ENST00000615671 TAL1P17542 331 aaPredicted RBP19.5■□□□□ 0.71
GABPB1-212ENST00000615671 CLCN3P51790 818 aa19.5■□□□□ 0.71
GABPB1-212ENST00000615671 ABCE1P61221 599 aaKnown RBP19.5■□□□□ 0.71
GABPB1-212ENST00000615671 MROH9Q5TGP6 573 aa19.5■□□□□ 0.71
GABPB1-212ENST00000615671 TSEN34Q9BSV6 310 aaKnown RBP19.5■□□□□ 0.71
GABPB1-212ENST00000615671 CIPCQ9C0C6 399 aa19.5■□□□□ 0.71
GABPB1-212ENST00000615671 CCDC22O60826 627 aa19.5■□□□□ 0.71
GABPB1-212ENST00000615671 PCNAP12004 261 aa19.5■□□□□ 0.71
GABPB1-212ENST00000615671 STX3Q13277 289 aa19.5■□□□□ 0.71
GABPB1-212ENST00000615671 RARS2Q5T160 578 aaKnown RBP19.5■□□□□ 0.71
GABPB1-212ENST00000615671 KCTD10Q9H3F6 313 aa19.5■□□□□ 0.71
GABPB1-212ENST00000615671 GOLPH3Q9H4A6 298 aa19.5■□□□□ 0.71
GABPB1-212ENST00000615671 SENP2Q9HC62 589 aa19.5■□□□□ 0.71
GABPB1-212ENST00000615671 ACO1P21399 889 aaKnown RBP19.49■□□□□ 0.71
GABPB1-212ENST00000615671 KLRK1P26718 216 aa19.49■□□□□ 0.71
GABPB1-212ENST00000615671 POU4F1Q01851 419 aa19.49■□□□□ 0.71
GABPB1-212ENST00000615671 ORC2Q13416 577 aaPredicted RBP19.49■□□□□ 0.71
GABPB1-212ENST00000615671 GALNTL6Q49A17 601 aa19.49■□□□□ 0.71
GABPB1-212ENST00000615671 DDI1Q8WTU0 396 aa19.49■□□□□ 0.71
GABPB1-212ENST00000615671 DDIT4Q9NX09 232 aa19.49■□□□□ 0.71
GABPB1-212ENST00000615671 CFAP99D6REC4 459 aa19.49■□□□□ 0.71
GABPB1-212ENST00000615671 METTL16Q86W50 562 aaKnown RBP19.49■□□□□ 0.71
GABPB1-212ENST00000615671 FAM151AQ8WW52 585 aa19.49■□□□□ 0.71
GABPB1-212ENST00000615671 SPIRE2Q8WWL2 714 aa19.49■□□□□ 0.71
GABPB1-212ENST00000615671 GPRC5CQ9NQ84 441 aa19.49■□□□□ 0.71
GABPB1-212ENST00000615671 C16orf86Q6ZW13 317 aa19.49■□□□□ 0.71
GABPB1-212ENST00000615671 ADCK1Q86TW2 530 aa19.49■□□□□ 0.71
GABPB1-212ENST00000615671 ACOT1Q86TX2 421 aa19.49■□□□□ 0.71
GABPB1-212ENST00000615671 ATP6V0D2Q8N8Y2 350 aa19.49■□□□□ 0.71
GABPB1-212ENST00000615671 SCFD2Q8WU76 684 aa19.49■□□□□ 0.71
GABPB1-212ENST00000615671 MRPL1Q9BYD6 325 aaKnown RBP19.49■□□□□ 0.71
GABPB1-212ENST00000615671 ADGRG1Q9Y653 693 aa19.49■□□□□ 0.71
GABPB1-212ENST00000615671 ARHGAP31Q2M1Z3 1444 aa19.49■□□□□ 0.71
GABPB1-212ENST00000615671 RGL2O15211 777 aa19.49■□□□□ 0.71
GABPB1-212ENST00000615671 CLASP2O75122 1294 aaKnown RBP19.49■□□□□ 0.71
GABPB1-212ENST00000615671 PHF2O75151 1096 aa19.49■□□□□ 0.71
GABPB1-212ENST00000615671 PCDH8O95206 1070 aa19.49■□□□□ 0.71
GABPB1-212ENST00000615671 CHI3L1P36222 383 aaPredicted RBP19.49■□□□□ 0.71
GABPB1-212ENST00000615671 LAMC2Q13753 1193 aa19.49■□□□□ 0.71
GABPB1-212ENST00000615671 DHX34Q14147 1143 aaKnown RBP19.49■□□□□ 0.71
GABPB1-212ENST00000615671 TMEM132BQ14DG7 1078 aa19.49■□□□□ 0.71
GABPB1-212ENST00000615671 ALX1Q15699 326 aa19.49■□□□□ 0.71
GABPB1-212ENST00000615671 DIS3LQ8TF46 1054 aaKnown RBP19.49■□□□□ 0.71
GABPB1-212ENST00000615671 ATP6V1G3Q96LB4 118 aa19.49■□□□□ 0.71
GABPB1-212ENST00000615671 PHF20Q9BVI0 1012 aa19.49■□□□□ 0.71
GABPB1-212ENST00000615671 DDX28Q9NUL7 540 aaKnown RBP19.49■□□□□ 0.71
GABPB1-212ENST00000615671 ARHGEF9O43307 516 aa19.49■□□□□ 0.71
GABPB1-212ENST00000615671 ATP5HO75947 161 aa19.49■□□□□ 0.71
GABPB1-212ENST00000615671 CKBP12277 381 aa19.49■□□□□ 0.71
GABPB1-212ENST00000615671 POLD3Q15054 466 aaPredicted RBP19.49■□□□□ 0.71
GABPB1-212ENST00000615671 JMJD4Q9H9V9 463 aa19.49■□□□□ 0.71
GABPB1-212ENST00000615671 F5H5T6 163 aa19.48■□□□□ 0.71
GABPB1-212ENST00000615671 P4HA2O15460 535 aa19.48■□□□□ 0.71
GABPB1-212ENST00000615671 STAG3L1P0CL83 205 aa19.48■□□□□ 0.71
GABPB1-212ENST00000615671 SLC11A2P49281 568 aa19.48■□□□□ 0.71
GABPB1-212ENST00000615671 FMR1Q06787 632 aaKnown RBP eCLIP19.48■□□□□ 0.71
GABPB1-212ENST00000615671 TP53BP2Q13625 1128 aa19.48■□□□□ 0.71
GABPB1-212ENST00000615671 C3orf62Q6ZUJ4 267 aa19.48■□□□□ 0.71
GABPB1-212ENST00000615671 VPS50Q96JG6 964 aa19.48■□□□□ 0.71
GABPB1-212ENST00000615671 TRIM9Q9C026 710 aa19.48■□□□□ 0.71
GABPB1-212ENST00000615671 TRPC1P48995 793 aa19.48■□□□□ 0.71
GABPB1-212ENST00000615671 EFEMP1Q12805 493 aa19.48■□□□□ 0.71
GABPB1-212ENST00000615671 STILQ15468 1287 aa19.48■□□□□ 0.71
GABPB1-212ENST00000615671 LRRC23Q53EV4 343 aaPredicted RBP19.48■□□□□ 0.71
GABPB1-212ENST00000615671 HIST2H2ACQ16777 129 aaPredicted RBP19.48■□□□□ 0.71
GABPB1-212ENST00000615671 PGS1Q32NB8 556 aa19.48■□□□□ 0.71
GABPB1-212ENST00000615671 KHDRBS2Q5VWX1 349 aaKnown RBP19.48■□□□□ 0.71
GABPB1-212ENST00000615671 HIST2H2AA3Q6FI13 130 aa19.48■□□□□ 0.71
GABPB1-212ENST00000615671 IYDQ6PHW0 289 aa19.48■□□□□ 0.71
GABPB1-212ENST00000615671 SIX5Q8N196 739 aa19.48■□□□□ 0.71
GABPB1-212ENST00000615671 STN1Q9H668 368 aaKnown RBP19.48■□□□□ 0.71
GABPB1-212ENST00000615671 PNPLA7Q6ZV29 1317 aa19.48■□□□□ 0.71
GABPB1-212ENST00000615671 TBC1D4O60343 1298 aa19.48■□□□□ 0.71
GABPB1-212ENST00000615671 CYP2C19P33261 490 aa19.48■□□□□ 0.71
GABPB1-212ENST00000615671 ACADSBP45954 432 aa19.48■□□□□ 0.71
GABPB1-212ENST00000615671 NAA30Q147X3 362 aaPredicted RBP19.48■□□□□ 0.71
GABPB1-212ENST00000615671 ZMAT2Q96NC0 199 aaKnown RBP19.48■□□□□ 0.71
GABPB1-212ENST00000615671 WWP1Q9H0M0 922 aa19.48■□□□□ 0.71
GABPB1-212ENST00000615671 EXOSC4Q9NPD3 245 aaKnown RBP19.48■□□□□ 0.71
GABPB1-212ENST00000615671 CST8O60676 142 aa19.48■□□□□ 0.71
GABPB1-212ENST00000615671 H2AFYO75367 372 aaKnown RBP19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms