RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 CICQ96RK0 1608 aaPredicted RBP10.21□□□□□ -0.78
TNFRSF9-204ENST00000615230 PP2D1A8MPX8 630 aa10.21□□□□□ -0.78
TNFRSF9-204ENST00000615230 PFKMP08237 780 aa10.21□□□□□ -0.78
TNFRSF9-204ENST00000615230 HMBSP08397 361 aa10.21□□□□□ -0.78
TNFRSF9-204ENST00000615230 ARHGEF2Q92974 986 aaKnown RBP10.21□□□□□ -0.78
TNFRSF9-204ENST00000615230 ARHGEF26Q96DR7 871 aa10.21□□□□□ -0.78
TNFRSF9-204ENST00000615230 CELF4Q9BZC1 486 aaKnown RBP10.21□□□□□ -0.78
TNFRSF9-204ENST00000615230 SCUBE2Q9NQ36 999 aa10.21□□□□□ -0.78
TNFRSF9-204ENST00000615230 ZNF839A8K0R7 811 aa10.2□□□□□ -0.78
TNFRSF9-204ENST00000615230 SERPINB9P50453 376 aa10.2□□□□□ -0.78
TNFRSF9-204ENST00000615230 HDAC4P56524 1084 aa10.2□□□□□ -0.78
TNFRSF9-204ENST00000615230 CENPCQ03188 943 aa10.2□□□□□ -0.78
TNFRSF9-204ENST00000615230 CACNB2Q08289 660 aaPredicted RBP10.2□□□□□ -0.78
TNFRSF9-204ENST00000615230 USP41Q3LFD5 358 aa10.2□□□□□ -0.78
TNFRSF9-204ENST00000615230 VGLL2Q8N8G2 317 aa10.2□□□□□ -0.78
TNFRSF9-204ENST00000615230 MTBPQ96DY7 904 aa10.2□□□□□ -0.78
TNFRSF9-204ENST00000615230 SERPINI1Q99574 410 aa10.2□□□□□ -0.78
TNFRSF9-204ENST00000615230 OSMRQ99650 979 aa10.2□□□□□ -0.78
TNFRSF9-204ENST00000615230 AGPAT3Q9NRZ7 376 aa10.2□□□□□ -0.78
TNFRSF9-204ENST00000615230 PAK5Q9P286 719 aa10.2□□□□□ -0.78
TNFRSF9-204ENST00000615230 PCSK1NQ9UHG2 260 aa10.2□□□□□ -0.78
TNFRSF9-204ENST00000615230 SMIM35A0A1B0GVV1 85 aa10.2□□□□□ -0.78
TNFRSF9-204ENST00000615230 ASS1P00966 412 aaKnown RBP10.2□□□□□ -0.78
TNFRSF9-204ENST00000615230 FGGP02679 453 aa10.2□□□□□ -0.78
TNFRSF9-204ENST00000615230 EIF3EP60228 445 aaKnown RBP10.2□□□□□ -0.78
TNFRSF9-204ENST00000615230 HIST2H2ACQ16777 129 aaPredicted RBP10.2□□□□□ -0.78
TNFRSF9-204ENST00000615230 TSNAXIP1Q2TAA8 658 aa10.2□□□□□ -0.78
TNFRSF9-204ENST00000615230 FSCBQ5H9T9 825 aa10.2□□□□□ -0.78
TNFRSF9-204ENST00000615230 HIST2H2AA3Q6FI13 130 aa10.2□□□□□ -0.78
TNFRSF9-204ENST00000615230 ATP11CQ8NB49 1132 aa10.2□□□□□ -0.78
TNFRSF9-204ENST00000615230 SERPINB11Q96P15 392 aa10.2□□□□□ -0.78
TNFRSF9-204ENST00000615230 CLCA2Q9UQC9 943 aa10.2□□□□□ -0.78
TNFRSF9-204ENST00000615230 AAR2Q9Y312 384 aaKnown RBP10.2□□□□□ -0.78
TNFRSF9-204ENST00000615230 GOLGA8TH3BQL2 631 aa10.2□□□□□ -0.78
TNFRSF9-204ENST00000615230 BUB1BO60566 1050 aaPredicted RBP10.2□□□□□ -0.78
TNFRSF9-204ENST00000615230 PALMO75781 387 aa10.2□□□□□ -0.78
TNFRSF9-204ENST00000615230 SSTR3P32745 418 aaPredicted RBP10.2□□□□□ -0.78
TNFRSF9-204ENST00000615230 NPEPPSP55786 919 aa10.2□□□□□ -0.78
TNFRSF9-204ENST00000615230 GRIK3Q13003 919 aa10.2□□□□□ -0.78
TNFRSF9-204ENST00000615230 THEMIS2Q5TEJ8 643 aa10.2□□□□□ -0.78
TNFRSF9-204ENST00000615230 TATDN1Q6P1N9 297 aa10.2□□□□□ -0.78
TNFRSF9-204ENST00000615230 FMO2Q99518 471 aa10.2□□□□□ -0.78
TNFRSF9-204ENST00000615230 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.2□□□□□ -0.78
TNFRSF9-204ENST00000615230 KRT82Q9NSB4 513 aa10.2□□□□□ -0.78
TNFRSF9-204ENST00000615230 ZMYM5Q9UJ78 669 aa10.2□□□□□ -0.78
TNFRSF9-204ENST00000615230 FRMPD4Q14CM0 1322 aa10.2□□□□□ -0.78
TNFRSF9-204ENST00000615230 DUSP11O75319 330 aaKnown RBP10.2□□□□□ -0.78
TNFRSF9-204ENST00000615230 PLTPP55058 493 aa10.2□□□□□ -0.78
TNFRSF9-204ENST00000615230 ANKRD20A4Q4UJ75 823 aa10.2□□□□□ -0.78
TNFRSF9-204ENST00000615230 ANKRD20A8PQ5CZ79 823 aa10.2□□□□□ -0.78
TNFRSF9-204ENST00000615230 ANKRD20A2Q5SQ80 823 aa10.2□□□□□ -0.78
TNFRSF9-204ENST00000615230 ANKRD20A1Q5TYW2 823 aa10.2□□□□□ -0.78
TNFRSF9-204ENST00000615230 IRAK1BP1Q5VVH5 260 aa10.2□□□□□ -0.78
TNFRSF9-204ENST00000615230 ACAD11Q709F0 780 aa10.2□□□□□ -0.78
TNFRSF9-204ENST00000615230 LRRC37A3O60309 1634 aa10.2□□□□□ -0.78
TNFRSF9-204ENST00000615230 A0A0G2JLL6 359 aaPredicted RBP10.2□□□□□ -0.78
TNFRSF9-204ENST00000615230 C2orf81A6NN90 581 aa10.2□□□□□ -0.78
TNFRSF9-204ENST00000615230 PRPF4O43172 522 aaKnown RBP eCLIP10.2□□□□□ -0.78
TNFRSF9-204ENST00000615230 CTIFO43310 598 aaKnown RBP10.2□□□□□ -0.78
TNFRSF9-204ENST00000615230 PSTPIP1O43586 416 aa10.2□□□□□ -0.78
TNFRSF9-204ENST00000615230 DYRK3O43781 588 aa10.2□□□□□ -0.78
TNFRSF9-204ENST00000615230 KRT14P02533 472 aa10.2□□□□□ -0.78
TNFRSF9-204ENST00000615230 ZNF284Q2VY69 593 aa10.2□□□□□ -0.78
TNFRSF9-204ENST00000615230 PRRT2Q7Z6L0 340 aaPredicted RBP10.2□□□□□ -0.78
TNFRSF9-204ENST00000615230 CTU1Q7Z7A3 348 aaKnown RBP10.2□□□□□ -0.78
TNFRSF9-204ENST00000615230 TAB3Q8N5C8 712 aaPredicted RBP10.2□□□□□ -0.78
TNFRSF9-204ENST00000615230 RIPOR3Q96MK2 946 aa10.2□□□□□ -0.78
TNFRSF9-204ENST00000615230 SYT15Q9BQS2 421 aa10.2□□□□□ -0.78
TNFRSF9-204ENST00000615230 HDAC6Q9UBN7 1215 aa10.2□□□□□ -0.78
TNFRSF9-204ENST00000615230 MAPK13O15264 365 aa10.19□□□□□ -0.78
TNFRSF9-204ENST00000615230 NDUFS3O75489 264 aa10.19□□□□□ -0.78
TNFRSF9-204ENST00000615230 RHOCP08134 193 aa10.19□□□□□ -0.78
TNFRSF9-204ENST00000615230 RBBP7Q16576 425 aa10.19□□□□□ -0.78
TNFRSF9-204ENST00000615230 NOMO2Q5JPE7 1267 aa10.19□□□□□ -0.78
TNFRSF9-204ENST00000615230 CAPN12Q6ZSI9 719 aa10.19□□□□□ -0.78
TNFRSF9-204ENST00000615230 CPB2Q96IY4 423 aa10.19□□□□□ -0.78
TNFRSF9-204ENST00000615230 NLNQ9BYT8 704 aa10.19□□□□□ -0.78
TNFRSF9-204ENST00000615230 ZCCHC2Q9C0B9 1178 aaKnown RBP10.19□□□□□ -0.78
TNFRSF9-204ENST00000615230 GOLPH3LQ9H4A5 285 aa10.19□□□□□ -0.78
TNFRSF9-204ENST00000615230 DDX4Q9NQI0 724 aaKnown RBP10.19□□□□□ -0.78
TNFRSF9-204ENST00000615230 NMRK1Q9NWW6 199 aa10.19□□□□□ -0.78
TNFRSF9-204ENST00000615230 SCAF8Q9UPN6 1271 aaKnown RBP10.19□□□□□ -0.78
TNFRSF9-204ENST00000615230 Q9Y3F1 56 aa10.19□□□□□ -0.78
TNFRSF9-204ENST00000615230 COPEO14579 308 aa10.19□□□□□ -0.78
TNFRSF9-204ENST00000615230 NDUFS2O75306 463 aa10.19□□□□□ -0.78
TNFRSF9-204ENST00000615230 GHRP10912 638 aa10.19□□□□□ -0.78
TNFRSF9-204ENST00000615230 CYP24A1Q07973 514 aa10.19□□□□□ -0.78
TNFRSF9-204ENST00000615230 FASTKD1Q53R41 847 aaKnown RBP10.19□□□□□ -0.78
TNFRSF9-204ENST00000615230 GPAT2Q6NUI2 795 aa10.19□□□□□ -0.78
TNFRSF9-204ENST00000615230 CD99L2Q8TCZ2 262 aa10.19□□□□□ -0.78
TNFRSF9-204ENST00000615230 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.19□□□□□ -0.78
TNFRSF9-204ENST00000615230 CABS1Q96KC9 395 aa10.19□□□□□ -0.78
TNFRSF9-204ENST00000615230 SAYSD1Q9NPB0 183 aa10.19□□□□□ -0.78
TNFRSF9-204ENST00000615230 DMAP1Q9NPF5 467 aaPredicted RBP10.19□□□□□ -0.78
TNFRSF9-204ENST00000615230 KLHL11Q9NVR0 708 aa10.19□□□□□ -0.78
TNFRSF9-204ENST00000615230 CDY2AQ9Y6F7 541 aa10.19□□□□□ -0.78
TNFRSF9-204ENST00000615230 CLUHO75153 1309 aa10.19□□□□□ -0.78
TNFRSF9-204ENST00000615230 LZTS3O60299 673 aaPredicted RBP10.19□□□□□ -0.78
TNFRSF9-204ENST00000615230 HSPA4LO95757 839 aa10.19□□□□□ -0.78
TNFRSF9-204ENST00000615230 YWHAQP27348 245 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms