RNA–Protein interactions for RNA: ENST00000615136.4

MMP28-204, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MMP28, Length 2,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-204ENST00000615136 PASKQ96RG2 1323 aa20.27■□□□□ 0.84
MMP28-204ENST00000615136 SRRM3A6NNA2 597 aaPredicted RBP20.27■□□□□ 0.84
MMP28-204ENST00000615136 PROSCO94903 275 aa20.27■□□□□ 0.84
MMP28-204ENST00000615136 CD19P15391 556 aa20.27■□□□□ 0.84
MMP28-204ENST00000615136 LSP1P33241 339 aa20.27■□□□□ 0.84
MMP28-204ENST00000615136 CCT5P48643 541 aa20.27■□□□□ 0.84
MMP28-204ENST00000615136 C12orf50Q8NA57 414 aaPredicted RBP20.27■□□□□ 0.84
MMP28-204ENST00000615136 MAGOHBQ96A72 148 aaKnown RBP20.27■□□□□ 0.84
MMP28-204ENST00000615136 RUNDC3BQ96NL0 473 aa20.27■□□□□ 0.84
MMP28-204ENST00000615136 ADPGKQ9BRR6 497 aa20.27■□□□□ 0.84
MMP28-204ENST00000615136 TSPYL1Q9H0U9 437 aa20.27■□□□□ 0.84
MMP28-204ENST00000615136 ZFYVE28Q9HCC9 887 aa20.27■□□□□ 0.84
MMP28-204ENST00000615136 DPP3Q9NY33 737 aa20.27■□□□□ 0.84
MMP28-204ENST00000615136 GRHL1Q9NZI5 618 aa20.27■□□□□ 0.84
MMP28-204ENST00000615136 TCRBV5S1A1TA0A578 114 aa20.26■□□□□ 0.83
MMP28-204ENST00000615136 PODXLO00592 558 aa20.26■□□□□ 0.83
MMP28-204ENST00000615136 PPEF2O14830 753 aa20.26■□□□□ 0.83
MMP28-204ENST00000615136 TLR3O15455 904 aaKnown RBP20.26■□□□□ 0.83
MMP28-204ENST00000615136 DARSP14868 501 aaKnown RBP20.26■□□□□ 0.83
MMP28-204ENST00000615136 LACTBP83111 547 aaPredicted RBP20.26■□□□□ 0.83
MMP28-204ENST00000615136 IRF5Q13568 498 aa20.26■□□□□ 0.83
MMP28-204ENST00000615136 CYP4A22Q5TCH4 519 aa20.26■□□□□ 0.83
MMP28-204ENST00000615136 SLC4A11Q8NBS3 891 aa20.26■□□□□ 0.83
MMP28-204ENST00000615136 KIF12Q96FN5 646 aa20.26■□□□□ 0.83
MMP28-204ENST00000615136 HPDLQ96IR7 371 aa20.26■□□□□ 0.83
MMP28-204ENST00000615136 PCDHGC3Q9UN70 934 aa20.26■□□□□ 0.83
MMP28-204ENST00000615136 RARAP10276 462 aa20.26■□□□□ 0.83
MMP28-204ENST00000615136 TCF4P15884 667 aa20.26■□□□□ 0.83
MMP28-204ENST00000615136 MDH1P40925 334 aaKnown RBP20.26■□□□□ 0.83
MMP28-204ENST00000615136 EIF3BP55884 814 aaKnown RBP20.26■□□□□ 0.83
MMP28-204ENST00000615136 GUCY1A3Q02108 690 aa20.26■□□□□ 0.83
MMP28-204ENST00000615136 ZNF252P-AS1Q0IIN9 211 aa20.26■□□□□ 0.83
MMP28-204ENST00000615136 DDX27Q96GQ7 796 aaKnown RBP20.26■□□□□ 0.83
MMP28-204ENST00000615136 NXF3Q9H4D5 531 aaKnown RBP20.26■□□□□ 0.83
MMP28-204ENST00000615136 MTUS1Q9ULD2 1270 aa20.26■□□□□ 0.83
MMP28-204ENST00000615136 SCN1AP35498 2009 aa20.25■□□□□ 0.83
MMP28-204ENST00000615136 CDH5P33151 784 aaPredicted RBP20.25■□□□□ 0.83
MMP28-204ENST00000615136 CPT1AP50416 773 aa20.25■□□□□ 0.83
MMP28-204ENST00000615136 OGDHQ02218 1023 aa20.25■□□□□ 0.83
MMP28-204ENST00000615136 GLRA4Q5JXX5 417 aa20.25■□□□□ 0.83
MMP28-204ENST00000615136 SLC27A1Q6PCB7 646 aa20.25■□□□□ 0.83
MMP28-204ENST00000615136 CCDC137Q6PK04 289 aaKnown RBP20.25■□□□□ 0.83
MMP28-204ENST00000615136 TMEM35BQ8NCS4 154 aa20.25■□□□□ 0.83
MMP28-204ENST00000615136 AP5M1Q9H0R1 490 aa20.25■□□□□ 0.83
MMP28-204ENST00000615136 EPB41L4BQ9H329 900 aa20.25■□□□□ 0.83
MMP28-204ENST00000615136 VRTNQ9H8Y1 702 aa20.25■□□□□ 0.83
MMP28-204ENST00000615136 FEZ2Q9UHY8 353 aaPredicted RBP20.25■□□□□ 0.83
MMP28-204ENST00000615136 USTQ9Y2C2 406 aa20.25■□□□□ 0.83
MMP28-204ENST00000615136 ATP8A1Q9Y2Q0 1164 aa20.25■□□□□ 0.83
MMP28-204ENST00000615136 C2CD2Q9Y426 696 aa20.25■□□□□ 0.83
MMP28-204ENST00000615136 CEP350Q5VT06 3117 aa20.25■□□□□ 0.83
MMP28-204ENST00000615136 HTTP42858 3142 aa20.25■□□□□ 0.83
MMP28-204ENST00000615136 EBAG9O00559 213 aa20.24■□□□□ 0.83
MMP28-204ENST00000615136 CILPO75339 1184 aa20.24■□□□□ 0.83
MMP28-204ENST00000615136 LSM8O95777 96 aaKnown RBP20.24■□□□□ 0.83
MMP28-204ENST00000615136 NUDT17P0C025 328 aa20.24■□□□□ 0.83
MMP28-204ENST00000615136 FNTAP49354 379 aa20.24■□□□□ 0.83
MMP28-204ENST00000615136 CORO7P57737 925 aa20.24■□□□□ 0.83
MMP28-204ENST00000615136 FSCN1Q16658 493 aaKnown RBP20.24■□□□□ 0.83
MMP28-204ENST00000615136 ANKS1BQ7Z6G8 1248 aa20.24■□□□□ 0.83
MMP28-204ENST00000615136 FEZF2Q8TBJ5 459 aa20.24■□□□□ 0.83
MMP28-204ENST00000615136 FBXO25Q8TCJ0 367 aa20.24■□□□□ 0.83
MMP28-204ENST00000615136 EPN3Q9H201 632 aa20.24■□□□□ 0.83
MMP28-204ENST00000615136 MRPL47Q9HD33 250 aaKnown RBP20.24■□□□□ 0.83
MMP28-204ENST00000615136 PARVAQ9NVD7 372 aa20.24■□□□□ 0.83
MMP28-204ENST00000615136 TUBGCP4Q9UGJ1 667 aa20.24■□□□□ 0.83
MMP28-204ENST00000615136 PARP2Q9UGN5 583 aa20.24■□□□□ 0.83
MMP28-204ENST00000615136 SLC12A6Q9UHW9 1150 aa20.24■□□□□ 0.83
MMP28-204ENST00000615136 SNX24Q9Y343 169 aa20.24■□□□□ 0.83
MMP28-204ENST00000615136 TLL2Q9Y6L7 1015 aa20.24■□□□□ 0.83
MMP28-204ENST00000615136 EIF4BP23588 611 aaKnown RBP20.24■□□□□ 0.83
MMP28-204ENST00000615136 COILP38432 576 aaPredicted RBP20.24■□□□□ 0.83
MMP28-204ENST00000615136 PURAQ00577 322 aaKnown RBP20.24■□□□□ 0.83
MMP28-204ENST00000615136 CAP1Q01518 475 aa20.24■□□□□ 0.83
MMP28-204ENST00000615136 SNX17Q15036 470 aa20.24■□□□□ 0.83
MMP28-204ENST00000615136 PTGISQ16647 500 aa20.24■□□□□ 0.83
MMP28-204ENST00000615136 KYAT1Q16773 422 aa20.24■□□□□ 0.83
MMP28-204ENST00000615136 DCAF4L1Q3SXM0 396 aa20.24■□□□□ 0.83
MMP28-204ENST00000615136 PTPN20Q4JDL3 420 aa20.24■□□□□ 0.83
MMP28-204ENST00000615136 SOCS4Q8WXH5 440 aa20.24■□□□□ 0.83
MMP28-204ENST00000615136 C18orf25Q96B23 403 aaPredicted RBP20.24■□□□□ 0.83
MMP28-204ENST00000615136 CENPHQ9H3R5 247 aa20.24■□□□□ 0.83
MMP28-204ENST00000615136 GABRQQ9UN88 632 aa20.24■□□□□ 0.83
MMP28-204ENST00000615136 TMEM191CA6NGB0 347 aa20.23■□□□□ 0.83
MMP28-204ENST00000615136 AKAP5P24588 427 aa20.23■□□□□ 0.83
MMP28-204ENST00000615136 ATICP31939 592 aa20.23■□□□□ 0.83
MMP28-204ENST00000615136 SLC1A1P43005 524 aa20.23■□□□□ 0.83
MMP28-204ENST00000615136 RPL21P46778 160 aaKnown RBP20.23■□□□□ 0.83
MMP28-204ENST00000615136 PLTPP55058 493 aa20.23■□□□□ 0.83
MMP28-204ENST00000615136 INHBEP58166 350 aa20.23■□□□□ 0.83
MMP28-204ENST00000615136 SNX27Q96L92 541 aa20.23■□□□□ 0.83
MMP28-204ENST00000615136 MCEEQ96PE7 176 aa20.23■□□□□ 0.83
MMP28-204ENST00000615136 APOL6Q9BWW8 343 aa20.23■□□□□ 0.83
MMP28-204ENST00000615136 PLVAPQ9BX97 442 aa20.23■□□□□ 0.83
MMP28-204ENST00000615136 FAM107BQ9H098 131 aa20.23■□□□□ 0.83
MMP28-204ENST00000615136 PABPC3Q9H361 631 aaKnown RBP20.23■□□□□ 0.83
MMP28-204ENST00000615136 ITGA11Q9UKX5 1188 aa20.23■□□□□ 0.83
MMP28-204ENST00000615136 SCINQ9Y6U3 715 aa20.23■□□□□ 0.83
MMP28-204ENST00000615136 NDUFAB1O14561 156 aa20.22■□□□□ 0.83
MMP28-204ENST00000615136 TRIM66O15016 1216 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms