RNA–Protein interactions for RNA: ENST00000614502.4

PDLIM2-218, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-218ENST00000614502 GJA1P17302 382 aa13.09□□□□□ -0.31
PDLIM2-218ENST00000614502 GABRR2P28476 465 aa13.09□□□□□ -0.31
PDLIM2-218ENST00000614502 WEE1P30291 646 aa13.09□□□□□ -0.31
PDLIM2-218ENST00000614502 ADSSP30520 456 aa13.09□□□□□ -0.31
PDLIM2-218ENST00000614502 NASPP49321 788 aaPredicted RBP13.09□□□□□ -0.31
PDLIM2-218ENST00000614502 NRLP54845 237 aa13.09□□□□□ -0.31
PDLIM2-218ENST00000614502 TFAMQ00059 246 aaKnown RBP13.09□□□□□ -0.31
PDLIM2-218ENST00000614502 CSTF1Q05048 431 aaKnown RBP13.09□□□□□ -0.31
PDLIM2-218ENST00000614502 PKP1Q13835 747 aa13.09□□□□□ -0.31
PDLIM2-218ENST00000614502 NFE2Q16621 373 aaPredicted RBP13.09□□□□□ -0.31
PDLIM2-218ENST00000614502 ARHGAP29Q52LW3 1261 aa13.09□□□□□ -0.31
PDLIM2-218ENST00000614502 TSSK4Q6SA08 328 aa13.09□□□□□ -0.31
PDLIM2-218ENST00000614502 MAMSTRQ6ZN01 415 aa13.09□□□□□ -0.31
PDLIM2-218ENST00000614502 DGLUCYQ7Z3D6 616 aa13.09□□□□□ -0.31
PDLIM2-218ENST00000614502 TMEM86AQ8N2M4 240 aa13.09□□□□□ -0.31
PDLIM2-218ENST00000614502 TMEM130Q8N3G9 435 aa13.09□□□□□ -0.31
PDLIM2-218ENST00000614502 LRRC52Q8N7C0 313 aa13.09□□□□□ -0.31
PDLIM2-218ENST00000614502 ATRIPQ8WXE1 791 aa13.09□□□□□ -0.31
PDLIM2-218ENST00000614502 SECISBP2LQ93073 1101 aaKnown RBP13.09□□□□□ -0.31
PDLIM2-218ENST00000614502 SEPT5Q99719 369 aaPredicted RBP13.09□□□□□ -0.31
PDLIM2-218ENST00000614502 FAM213AQ9BRX8 229 aa13.09□□□□□ -0.31
PDLIM2-218ENST00000614502 CRISPLD1Q9H336 500 aa13.09□□□□□ -0.31
PDLIM2-218ENST00000614502 TASP1Q9H6P5 420 aa13.09□□□□□ -0.31
PDLIM2-218ENST00000614502 RBAKQ9NYW8 714 aaPredicted RBP13.09□□□□□ -0.31
PDLIM2-218ENST00000614502 TBC1D7Q9P0N9 293 aa13.09□□□□□ -0.31
PDLIM2-218ENST00000614502 ITGA11Q9UKX5 1188 aa13.09□□□□□ -0.31
PDLIM2-218ENST00000614502 PCDHB5Q9Y5E4 795 aa13.09□□□□□ -0.31
PDLIM2-218ENST00000614502 PIAS3Q9Y6X2 628 aa13.09□□□□□ -0.31
PDLIM2-218ENST00000614502 CACNA1BQ00975 2339 aa13.08□□□□□ -0.31
PDLIM2-218ENST00000614502 OBSL1O75147 1896 aa13.08□□□□□ -0.32
PDLIM2-218ENST00000614502 SOBPA7XYQ1 873 aa13.08□□□□□ -0.32
PDLIM2-218ENST00000614502 TISP43B9A030 160 aa13.08□□□□□ -0.32
PDLIM2-218ENST00000614502 SPTLC2O15270 562 aa13.08□□□□□ -0.32
PDLIM2-218ENST00000614502 EXTL3O43909 919 aa13.08□□□□□ -0.32
PDLIM2-218ENST00000614502 HUS1O60921 280 aa13.08□□□□□ -0.32
PDLIM2-218ENST00000614502 VIPR2P41587 438 aa13.08□□□□□ -0.32
PDLIM2-218ENST00000614502 PLCB2Q00722 1185 aa13.08□□□□□ -0.32
PDLIM2-218ENST00000614502 MYL7Q01449 175 aa13.08□□□□□ -0.32
PDLIM2-218ENST00000614502 FCHO2Q0JRZ9 810 aa13.08□□□□□ -0.32
PDLIM2-218ENST00000614502 FZD5Q13467 585 aa13.08□□□□□ -0.32
PDLIM2-218ENST00000614502 GPR158Q5T848 1215 aa13.08□□□□□ -0.32
PDLIM2-218ENST00000614502 ARID3BQ8IVW6 561 aaPredicted RBP13.08□□□□□ -0.32
PDLIM2-218ENST00000614502 EFCAB13Q8IY85 973 aa13.08□□□□□ -0.32
PDLIM2-218ENST00000614502 GPD1LQ8N335 351 aa13.08□□□□□ -0.32
PDLIM2-218ENST00000614502 LINC00301Q8NCQ3 95 aa13.08□□□□□ -0.32
PDLIM2-218ENST00000614502 OR10T2Q8NGX3 314 aa13.08□□□□□ -0.32
PDLIM2-218ENST00000614502 ANKRD36BP1Q96IX9 119 aa13.08□□□□□ -0.32
PDLIM2-218ENST00000614502 TMEM209Q96SK2 561 aa13.08□□□□□ -0.32
PDLIM2-218ENST00000614502 CHRDQ9H2X0 955 aa13.08□□□□□ -0.32
PDLIM2-218ENST00000614502 KIAA1586Q9HCI6 787 aa13.08□□□□□ -0.32
PDLIM2-218ENST00000614502 THG1LQ9NWX6 298 aaKnown RBP13.08□□□□□ -0.32
PDLIM2-218ENST00000614502 ZSCAN32Q9NX65 697 aa13.08□□□□□ -0.32
PDLIM2-218ENST00000614502 NDRG2Q9UN36 371 aaKnown RBP13.08□□□□□ -0.32
PDLIM2-218ENST00000614502 RALGAPA1Q6GYQ0 2036 aa13.07□□□□□ -0.32
PDLIM2-218ENST00000614502 TULP1O00294 542 aaPredicted RBP13.07□□□□□ -0.32
PDLIM2-218ENST00000614502 YEATS4O95619 227 aa13.07□□□□□ -0.32
PDLIM2-218ENST00000614502 ITGB3P05106 788 aa13.07□□□□□ -0.32
PDLIM2-218ENST00000614502 TMEM191BP0C7N4 346 aa13.07□□□□□ -0.32
PDLIM2-218ENST00000614502 CSH1P0DML2 217 aa13.07□□□□□ -0.32
PDLIM2-218ENST00000614502 CSH2P0DML3 217 aa13.07□□□□□ -0.32
PDLIM2-218ENST00000614502 HAPLN1P10915 354 aaPredicted RBP13.07□□□□□ -0.32
PDLIM2-218ENST00000614502 DDX6P26196 483 aaKnown RBP eCLIP13.07□□□□□ -0.32
PDLIM2-218ENST00000614502 POLR2BP30876 1174 aaKnown RBP13.07□□□□□ -0.32
PDLIM2-218ENST00000614502 CCR3P51677 355 aa13.07□□□□□ -0.32
PDLIM2-218ENST00000614502 KPNA1P52294 538 aaPredicted RBP13.07□□□□□ -0.32
PDLIM2-218ENST00000614502 RBP5P82980 135 aa13.07□□□□□ -0.32
PDLIM2-218ENST00000614502 MYO1EQ12965 1108 aa13.07□□□□□ -0.32
PDLIM2-218ENST00000614502 LRRC32Q14392 662 aa13.07□□□□□ -0.32
PDLIM2-218ENST00000614502 FOXD4L5Q5VV16 416 aaPredicted RBP13.07□□□□□ -0.32
PDLIM2-218ENST00000614502 WSCD1Q658N2 575 aa13.07□□□□□ -0.32
PDLIM2-218ENST00000614502 CSGALNACT2Q8N6G5 542 aa13.07□□□□□ -0.32
PDLIM2-218ENST00000614502 GPR161Q8N6U8 529 aaKnown RBP13.07□□□□□ -0.32
PDLIM2-218ENST00000614502 PDILTQ8N807 584 aa13.07□□□□□ -0.32
PDLIM2-218ENST00000614502 IQUBQ8NA54 791 aa13.07□□□□□ -0.32
PDLIM2-218ENST00000614502 LEO1Q8WVC0 666 aaPredicted RBP13.07□□□□□ -0.32
PDLIM2-218ENST00000614502 FOXD4L4Q8WXT5 416 aaPredicted RBP13.07□□□□□ -0.32
PDLIM2-218ENST00000614502 SAAL1Q96ER3 474 aa13.07□□□□□ -0.32
PDLIM2-218ENST00000614502 ACBD6Q9BR61 282 aa13.07□□□□□ -0.32
PDLIM2-218ENST00000614502 PANK2Q9BZ23 570 aa13.07□□□□□ -0.32
PDLIM2-218ENST00000614502 MAGEF1Q9HAY2 307 aa13.07□□□□□ -0.32
PDLIM2-218ENST00000614502 PRMT8Q9NR22 394 aaPredicted RBP13.07□□□□□ -0.32
PDLIM2-218ENST00000614502 GDAP2Q9NXN4 497 aa13.07□□□□□ -0.32
PDLIM2-218ENST00000614502 ABI2Q9NYB9 513 aaPredicted RBP13.07□□□□□ -0.32
PDLIM2-218ENST00000614502 DLL3Q9NYJ7 618 aa13.07□□□□□ -0.32
PDLIM2-218ENST00000614502 UXTQ9UBK9 157 aaPredicted RBP13.07□□□□□ -0.32
PDLIM2-218ENST00000614502 AGAP1Q9UPQ3 857 aa13.07□□□□□ -0.32
PDLIM2-218ENST00000614502 KIF26AQ9ULI4 1882 aaPredicted RBP13.07□□□□□ -0.32
PDLIM2-218ENST00000614502 NCANO14594 1321 aa13.07□□□□□ -0.32
PDLIM2-218ENST00000614502 ZNF233A6NK53 670 aa13.06□□□□□ -0.32
PDLIM2-218ENST00000614502 EIF3DO15371 548 aaKnown RBP eCLIP13.06□□□□□ -0.32
PDLIM2-218ENST00000614502 CUTAO60888 179 aa13.06□□□□□ -0.32
PDLIM2-218ENST00000614502 KRT19P08727 400 aa13.06□□□□□ -0.32
PDLIM2-218ENST00000614502 PCSK1P29120 753 aa13.06□□□□□ -0.32
PDLIM2-218ENST00000614502 LHX1P48742 406 aa13.06□□□□□ -0.32
PDLIM2-218ENST00000614502 SNRPFP62306 86 aaKnown RBP13.06□□□□□ -0.32
PDLIM2-218ENST00000614502 RPL10AP62906 217 aaKnown RBP13.06□□□□□ -0.32
PDLIM2-218ENST00000614502 KCNA1Q09470 495 aa13.06□□□□□ -0.32
PDLIM2-218ENST00000614502 PUM1Q14671 1186 aaKnown RBP eCLIP13.06□□□□□ -0.32
PDLIM2-218ENST00000614502 RSPO4Q2I0M5 234 aaPredicted RBP13.06□□□□□ -0.32
PDLIM2-218ENST00000614502 DGKKQ5KSL6 1271 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms