RNA–Protein interactions for RNA: ENST00000613455.4

CPNE9-205, Transcript of copine family member 9, humanhuman

TSL 5 BASIC

Gene CPNE9, Length 1,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-205ENST00000613455 INTUQ9ULD6 942 aa21.55■■□□□ 1.04
CPNE9-205ENST00000613455 PCDHGC3Q9UN70 934 aa21.55■■□□□ 1.04
CPNE9-205ENST00000613455 STXBP5LQ9Y2K9 1186 aa21.55■■□□□ 1.04
CPNE9-205ENST00000613455 A8MXQ7 604 aa21.54■■□□□ 1.04
CPNE9-205ENST00000613455 M0QZQ0 153 aa21.54■■□□□ 1.04
CPNE9-205ENST00000613455 KRT86O43790 486 aa21.54■■□□□ 1.04
CPNE9-205ENST00000613455 RTN2O75298 545 aa21.54■■□□□ 1.04
CPNE9-205ENST00000613455 FTLP02792 175 aaPredicted RBP21.54■■□□□ 1.04
CPNE9-205ENST00000613455 AMHP03971 560 aa21.54■■□□□ 1.04
CPNE9-205ENST00000613455 VDRP11473 427 aa21.54■■□□□ 1.04
CPNE9-205ENST00000613455 PAX3P23760 479 aa21.54■■□□□ 1.04
CPNE9-205ENST00000613455 NOMO3P69849 1222 aa21.54■■□□□ 1.04
CPNE9-205ENST00000613455 PPIGQ13427 754 aaKnown RBP eCLIP21.54■■□□□ 1.04
CPNE9-205ENST00000613455 TMCO2Q7Z6W1 182 aaPredicted RBP21.54■■□□□ 1.04
CPNE9-205ENST00000613455 TMEM86AQ8N2M4 240 aa21.54■■□□□ 1.04
CPNE9-205ENST00000613455 C12orf29Q8N999 325 aa21.54■■□□□ 1.04
CPNE9-205ENST00000613455 SUSD3Q96L08 255 aa21.54■■□□□ 1.04
CPNE9-205ENST00000613455 SNX25Q9H3E2 840 aa21.54■■□□□ 1.04
CPNE9-205ENST00000613455 RC3H2Q9HBD1 1191 aaKnown RBP21.54■■□□□ 1.04
CPNE9-205ENST00000613455 SALL4Q9UJQ4 1053 aa21.54■■□□□ 1.04
CPNE9-205ENST00000613455 GUCA1BQ9UMX6 200 aa21.54■■□□□ 1.04
CPNE9-205ENST00000613455 PRG3Q9Y2Y8 225 aaPredicted RBP21.54■■□□□ 1.04
CPNE9-205ENST00000613455 O00370 1275 aa21.53■■□□□ 1.04
CPNE9-205ENST00000613455 ODC1P11926 461 aa21.53■■□□□ 1.04
CPNE9-205ENST00000613455 CENPCQ03188 943 aa21.53■■□□□ 1.04
CPNE9-205ENST00000613455 FPGSQ05932 587 aa21.53■■□□□ 1.04
CPNE9-205ENST00000613455 PTPN14Q15678 1187 aa21.53■■□□□ 1.04
CPNE9-205ENST00000613455 SGO2Q562F6 1265 aa21.53■■□□□ 1.04
CPNE9-205ENST00000613455 NAA35Q5VZE5 725 aa21.53■■□□□ 1.04
CPNE9-205ENST00000613455 OTOP2Q7RTS6 562 aa21.53■■□□□ 1.04
CPNE9-205ENST00000613455 TXLNBQ8N3L3 684 aa21.53■■□□□ 1.04
CPNE9-205ENST00000613455 PDCL3Q9H2J4 239 aa21.53■■□□□ 1.04
CPNE9-205ENST00000613455 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.53■■□□□ 1.04
CPNE9-205ENST00000613455 TIMM13Q9Y5L4 95 aaPredicted RBP21.53■■□□□ 1.04
CPNE9-205ENST00000613455 MED7O43513 233 aa21.52■■□□□ 1.04
CPNE9-205ENST00000613455 CYP11A1P05108 521 aa21.52■■□□□ 1.04
CPNE9-205ENST00000613455 PDGFRBP09619 1106 aa21.52■■□□□ 1.04
CPNE9-205ENST00000613455 EPHB4P54760 987 aa21.52■■□□□ 1.04
CPNE9-205ENST00000613455 ACAD10Q6JQN1 1059 aa21.52■■□□□ 1.04
CPNE9-205ENST00000613455 CRYBG2Q8N1P7 616 aa21.52■■□□□ 1.04
CPNE9-205ENST00000613455 CPA5Q8WXQ8 436 aa21.52■■□□□ 1.04
CPNE9-205ENST00000613455 ZNF689Q96CS4 500 aaPredicted RBP21.52■■□□□ 1.04
CPNE9-205ENST00000613455 KIAA1257Q9ULG3 409 aa21.52■■□□□ 1.04
CPNE9-205ENST00000613455 ANKRD62A6NC57 917 aa21.52■■□□□ 1.03
CPNE9-205ENST00000613455 NRP1O14786 923 aa21.52■■□□□ 1.03
CPNE9-205ENST00000613455 LSM8O95777 96 aaKnown RBP21.52■■□□□ 1.03
CPNE9-205ENST00000613455 TMEM253P0C7T8 217 aa21.52■■□□□ 1.03
CPNE9-205ENST00000613455 CDH5P33151 784 aaPredicted RBP21.52■■□□□ 1.03
CPNE9-205ENST00000613455 SLC11A1P49279 550 aa21.52■■□□□ 1.03
CPNE9-205ENST00000613455 LPIN3Q9BQK8 851 aa21.52■■□□□ 1.03
CPNE9-205ENST00000613455 TMEM175Q9BSA9 504 aa21.52■■□□□ 1.03
CPNE9-205ENST00000613455 THAP2Q9H0W7 228 aa21.52■■□□□ 1.03
CPNE9-205ENST00000613455 MARCH5Q9NX47 278 aa21.52■■□□□ 1.03
CPNE9-205ENST00000613455 VWA8A3KMH1 1905 aa21.51■■□□□ 1.03
CPNE9-205ENST00000613455 MACROD2A1Z1Q3 448 aa21.51■■□□□ 1.03
CPNE9-205ENST00000613455 BTNL10A8MVZ5 291 aa21.51■■□□□ 1.03
CPNE9-205ENST00000613455 MICAL2O94851 1124 aa21.51■■□□□ 1.03
CPNE9-205ENST00000613455 SYN1P17600 705 aa21.51■■□□□ 1.03
CPNE9-205ENST00000613455 ABCB4P21439 1286 aa21.51■■□□□ 1.03
CPNE9-205ENST00000613455 CNGA2Q16280 664 aa21.51■■□□□ 1.03
CPNE9-205ENST00000613455 PPP1R26Q5T8A7 1209 aaPredicted RBP21.51■■□□□ 1.03
CPNE9-205ENST00000613455 COL13A1Q5TAT6 717 aaPredicted RBP21.51■■□□□ 1.03
CPNE9-205ENST00000613455 KIAA0319Q5VV43 1072 aa21.51■■□□□ 1.03
CPNE9-205ENST00000613455 DENND1BQ6P3S1 775 aa21.51■■□□□ 1.03
CPNE9-205ENST00000613455 ZNF365Q70YC5 407 aa21.51■■□□□ 1.03
CPNE9-205ENST00000613455 C1orf131Q8NDD1 294 aaKnown RBP21.51■■□□□ 1.03
CPNE9-205ENST00000613455 SPATA18Q8TC71 538 aa21.51■■□□□ 1.03
CPNE9-205ENST00000613455 ABHD8Q96I13 439 aa21.51■■□□□ 1.03
CPNE9-205ENST00000613455 HTATIP2Q9BUP3 242 aa21.51■■□□□ 1.03
CPNE9-205ENST00000613455 DDX43Q9NXZ2 648 aaKnown RBP21.51■■□□□ 1.03
CPNE9-205ENST00000613455 GALTP07902 379 aa21.5■■□□□ 1.03
CPNE9-205ENST00000613455 ACAT1P24752 427 aaKnown RBP21.5■■□□□ 1.03
CPNE9-205ENST00000613455 LHX1P48742 406 aa21.5■■□□□ 1.03
CPNE9-205ENST00000613455 LCLAT1Q6UWP7 414 aa21.5■■□□□ 1.03
CPNE9-205ENST00000613455 WDTC1Q8N5D0 677 aa21.5■■□□□ 1.03
CPNE9-205ENST00000613455 B3GALNT2Q8NCR0 500 aa21.5■■□□□ 1.03
CPNE9-205ENST00000613455 ARHGEF26Q96DR7 871 aa21.5■■□□□ 1.03
CPNE9-205ENST00000613455 RTP3Q9BQQ7 232 aa21.5■■□□□ 1.03
CPNE9-205ENST00000613455 LHX5Q9H2C1 402 aa21.5■■□□□ 1.03
CPNE9-205ENST00000613455 CWH43Q9H720 699 aa21.5■■□□□ 1.03
CPNE9-205ENST00000613455 FAM49BQ9NUQ9 324 aa21.5■■□□□ 1.03
CPNE9-205ENST00000613455 DSEQ9UL01 958 aa21.5■■□□□ 1.03
CPNE9-205ENST00000613455 PCDHB8Q9UN66 801 aa21.5■■□□□ 1.03
CPNE9-205ENST00000613455 PAXBP1Q9Y5B6 917 aa21.5■■□□□ 1.03
CPNE9-205ENST00000613455 NCANO14594 1321 aa21.5■■□□□ 1.03
CPNE9-205ENST00000613455 FANCGO15287 622 aa21.49■■□□□ 1.03
CPNE9-205ENST00000613455 TNNT1P13805 278 aa21.49■■□□□ 1.03
CPNE9-205ENST00000613455 PBX3P40426 434 aa21.49■■□□□ 1.03
CPNE9-205ENST00000613455 NSFP46459 744 aaKnown RBP21.49■■□□□ 1.03
CPNE9-205ENST00000613455 PSMC1P62191 440 aaKnown RBP21.49■■□□□ 1.03
CPNE9-205ENST00000613455 ETF1P62495 437 aaKnown RBP21.49■■□□□ 1.03
CPNE9-205ENST00000613455 CCDC142Q17RM4 750 aa21.49■■□□□ 1.03
CPNE9-205ENST00000613455 TMEM240Q5SV17 173 aa21.49■■□□□ 1.03
CPNE9-205ENST00000613455 ARHGAP17Q68EM7 881 aa21.49■■□□□ 1.03
CPNE9-205ENST00000613455 FAM117BQ6P1L5 589 aa21.49■■□□□ 1.03
CPNE9-205ENST00000613455 MON1BQ7L1V2 547 aa21.49■■□□□ 1.03
CPNE9-205ENST00000613455 CTNNBL1Q8WYA6 563 aaPredicted RBP21.49■■□□□ 1.03
CPNE9-205ENST00000613455 TNIP3Q96KP6 325 aa21.49■■□□□ 1.03
CPNE9-205ENST00000613455 WDR24Q96S15 920 aa21.49■■□□□ 1.03
CPNE9-205ENST00000613455 ADAM28Q9UKQ2 775 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms