RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 KLRF2D3W0D1 207 aa9.13□□□□□ -0.95
TTC28-208ENST00000612946 ALADP13716 330 aa9.13□□□□□ -0.95
TTC28-208ENST00000612946 MSH3P20585 1137 aa9.13□□□□□ -0.95
TTC28-208ENST00000612946 MAGEA4P43358 317 aa9.13□□□□□ -0.95
TTC28-208ENST00000612946 SLC12A1Q13621 1099 aa9.13□□□□□ -0.95
TTC28-208ENST00000612946 PIGHQ14442 188 aaPredicted RBP9.13□□□□□ -0.95
TTC28-208ENST00000612946 FASTKD1Q53R41 847 aaKnown RBP9.13□□□□□ -0.95
TTC28-208ENST00000612946 DQX1Q8TE96 717 aaKnown RBP9.13□□□□□ -0.95
TTC28-208ENST00000612946 HINFPQ9BQA5 517 aa9.13□□□□□ -0.95
TTC28-208ENST00000612946 USP44Q9H0E7 712 aa9.13□□□□□ -0.95
TTC28-208ENST00000612946 ARHGEF3Q9NR81 526 aa9.13□□□□□ -0.95
TTC28-208ENST00000612946 MKLN1Q9UL63 735 aa9.13□□□□□ -0.95
TTC28-208ENST00000612946 FAM95CA0A1B0GW59 222 aa9.13□□□□□ -0.95
TTC28-208ENST00000612946 FARP2O94887 1054 aaPredicted RBP9.13□□□□□ -0.95
TTC28-208ENST00000612946 ATF6P18850 670 aa9.13□□□□□ -0.95
TTC28-208ENST00000612946 DHDDSQ86SQ9 333 aa9.13□□□□□ -0.95
TTC28-208ENST00000612946 MAB21L3Q8N8X9 362 aa9.13□□□□□ -0.95
TTC28-208ENST00000612946 HDAC7Q8WUI4 952 aa9.13□□□□□ -0.95
TTC28-208ENST00000612946 THAP1Q9NVV9 213 aa9.13□□□□□ -0.95
TTC28-208ENST00000612946 SCAF8Q9UPN6 1271 aaKnown RBP9.13□□□□□ -0.95
TTC28-208ENST00000612946 NEURL1BA8MQ27 555 aa9.13□□□□□ -0.95
TTC28-208ENST00000612946 C5orf58C9J3I9 102 aa9.13□□□□□ -0.95
TTC28-208ENST00000612946 TRAP1Q12931 704 aaKnown RBP9.13□□□□□ -0.95
TTC28-208ENST00000612946 AP3B2Q13367 1082 aa9.13□□□□□ -0.95
TTC28-208ENST00000612946 ZC2HC1CQ53FD0 456 aaPredicted RBP9.13□□□□□ -0.95
TTC28-208ENST00000612946 EFHBQ8N7U6 833 aa9.13□□□□□ -0.95
TTC28-208ENST00000612946 TATDN2Q93075 761 aa9.13□□□□□ -0.95
TTC28-208ENST00000612946 LRMDAQ9H2I8 198 aa9.13□□□□□ -0.95
TTC28-208ENST00000612946 HAO1Q9UJM8 370 aa9.13□□□□□ -0.95
TTC28-208ENST00000612946 EIF4E1BA6NMX2 242 aaKnown RBP9.13□□□□□ -0.95
TTC28-208ENST00000612946 OR6Y1Q8NGX8 325 aa9.13□□□□□ -0.95
TTC28-208ENST00000612946 MDM1Q8TC05 714 aa9.13□□□□□ -0.95
TTC28-208ENST00000612946 ULK4Q96C45 1275 aa9.13□□□□□ -0.95
TTC28-208ENST00000612946 NARS2Q96I59 477 aaKnown RBP9.13□□□□□ -0.95
TTC28-208ENST00000612946 ANKZF1Q9H8Y5 726 aa9.13□□□□□ -0.95
TTC28-208ENST00000612946 AKAP7Q9P0M2 348 aaPredicted RBP9.13□□□□□ -0.95
TTC28-208ENST00000612946 SLC9A2Q9UBY0 812 aa9.13□□□□□ -0.95
TTC28-208ENST00000612946 PFDN2Q9UHV9 154 aa9.13□□□□□ -0.95
TTC28-208ENST00000612946 CIITAP33076 1130 aa9.13□□□□□ -0.95
TTC28-208ENST00000612946 MTHFSDQ2M296 383 aaKnown RBP9.13□□□□□ -0.95
TTC28-208ENST00000612946 RFX4Q33E94 735 aa9.13□□□□□ -0.95
TTC28-208ENST00000612946 AARS2Q5JTZ9 985 aaKnown RBP9.13□□□□□ -0.95
TTC28-208ENST00000612946 ABRAXAS1Q6UWZ7 409 aa9.13□□□□□ -0.95
TTC28-208ENST00000612946 EXOC3L1Q86VI1 746 aa9.13□□□□□ -0.95
TTC28-208ENST00000612946 CCNYQ8ND76 341 aa9.13□□□□□ -0.95
TTC28-208ENST00000612946 SLC30A5Q8TAD4 765 aa9.13□□□□□ -0.95
TTC28-208ENST00000612946 CYLDQ9NQC7 956 aa9.13□□□□□ -0.95
TTC28-208ENST00000612946 HEY2Q9UBP5 337 aa9.13□□□□□ -0.95
TTC28-208ENST00000612946 PLB1Q6P1J6 1458 aa9.13□□□□□ -0.95
TTC28-208ENST00000612946 ANXA6P08133 673 aa9.13□□□□□ -0.95
TTC28-208ENST00000612946 MAPK1P28482 360 aa9.13□□□□□ -0.95
TTC28-208ENST00000612946 CTDSPL2Q05D32 466 aa9.13□□□□□ -0.95
TTC28-208ENST00000612946 POLA2Q14181 598 aa9.13□□□□□ -0.95
TTC28-208ENST00000612946 SYCE2Q6PIF2 218 aa9.13□□□□□ -0.95
TTC28-208ENST00000612946 CLEC4GQ6UXB4 293 aa9.13□□□□□ -0.95
TTC28-208ENST00000612946 PROCA1Q8NCQ7 364 aaPredicted RBP9.13□□□□□ -0.95
TTC28-208ENST00000612946 NOS1APO75052 506 aaPredicted RBP9.13□□□□□ -0.95
TTC28-208ENST00000612946 ITGA6P23229 1130 aa9.13□□□□□ -0.95
TTC28-208ENST00000612946 DYNLT1P63172 113 aa9.13□□□□□ -0.95
TTC28-208ENST00000612946 EXOSC10Q01780 885 aaKnown RBP9.13□□□□□ -0.95
TTC28-208ENST00000612946 PROX1Q92786 737 aa9.13□□□□□ -0.95
TTC28-208ENST00000612946 USP13Q92995 863 aaPredicted RBP9.13□□□□□ -0.95
TTC28-208ENST00000612946 MUC13Q9H3R2 512 aa9.13□□□□□ -0.95
TTC28-208ENST00000612946 DDX18Q9NVP1 670 aaKnown RBP9.13□□□□□ -0.95
TTC28-208ENST00000612946 PLK2Q9NYY3 685 aa9.13□□□□□ -0.95
TTC28-208ENST00000612946 ZNF221Q9UK13 617 aa9.13□□□□□ -0.95
TTC28-208ENST00000612946 TTC7AQ9ULT0 858 aaPredicted RBP9.13□□□□□ -0.95
TTC28-208ENST00000612946 KCNMA1Q12791 1236 aa9.12□□□□□ -0.95
TTC28-208ENST00000612946 ZFP69Q49AA0 526 aa9.12□□□□□ -0.95
TTC28-208ENST00000612946 RRM2BQ7LG56 351 aa9.12□□□□□ -0.95
TTC28-208ENST00000612946 JDP2Q8WYK2 163 aa9.12□□□□□ -0.95
TTC28-208ENST00000612946 ANKHQ9HCJ1 492 aa9.12□□□□□ -0.95
TTC28-208ENST00000612946 KCNQ3O43525 872 aa9.12□□□□□ -0.95
TTC28-208ENST00000612946 LGALS3BPQ08380 585 aa9.12□□□□□ -0.95
TTC28-208ENST00000612946 PAGR1Q9BTK6 254 aa9.12□□□□□ -0.95
TTC28-208ENST00000612946 NCKAP5LQ9HCH0 1330 aa9.12□□□□□ -0.95
TTC28-208ENST00000612946 A2ML1A8K2U0 1454 aa9.12□□□□□ -0.95
TTC28-208ENST00000612946 ZBTB39O15060 712 aa9.12□□□□□ -0.95
TTC28-208ENST00000612946 PRKAR1AP10644 381 aa9.12□□□□□ -0.95
TTC28-208ENST00000612946 SPIRE1Q08AE8 756 aa9.12□□□□□ -0.95
TTC28-208ENST00000612946 SFRP1Q8N474 314 aa9.12□□□□□ -0.95
TTC28-208ENST00000612946 SPATA17Q96L03 361 aa9.12□□□□□ -0.95
TTC28-208ENST00000612946 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.12□□□□□ -0.95
TTC28-208ENST00000612946 GLRA3O75311 464 aa9.12□□□□□ -0.95
TTC28-208ENST00000612946 DDIASQ8IXT1 998 aa9.12□□□□□ -0.95
TTC28-208ENST00000612946 MYL10Q9BUA6 226 aa9.12□□□□□ -0.95
TTC28-208ENST00000612946 AMNQ9BXJ7 453 aa9.12□□□□□ -0.95
TTC28-208ENST00000612946 SLC13A1Q9BZW2 595 aa9.12□□□□□ -0.95
TTC28-208ENST00000612946 SELENONQ9NZV5 590 aa9.12□□□□□ -0.95
TTC28-208ENST00000612946 MLH3Q9UHC1 1453 aa9.12□□□□□ -0.95
TTC28-208ENST00000612946 PARNO95453 639 aaKnown RBP9.12□□□□□ -0.95
TTC28-208ENST00000612946 PRCPP42785 496 aa9.12□□□□□ -0.95
TTC28-208ENST00000612946 SARSP49591 514 aaKnown RBP9.12□□□□□ -0.95
TTC28-208ENST00000612946 MED10Q9BTT4 135 aa9.12□□□□□ -0.95
TTC28-208ENST00000612946 KLHL8Q9P2G9 620 aaPredicted RBP9.12□□□□□ -0.95
TTC28-208ENST00000612946 ACEP12821 1306 aa9.12□□□□□ -0.95
TTC28-208ENST00000612946 E9PCH4 1651 aa9.12□□□□□ -0.95
TTC28-208ENST00000612946 HEATR9A2RTY3 570 aa9.12□□□□□ -0.95
TTC28-208ENST00000612946 SNAP23O00161 211 aa9.12□□□□□ -0.95
TTC28-208ENST00000612946 ZNF23P17027 643 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms