RNA–Protein interactions for RNA: ENST00000612927.1

PCDHGA4-202, Transcript of protocadherin gamma subfamily A, 4, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA4, Length 2,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4-202ENST00000612927 FBF1Q8TES7 1133 aa13.37□□□□□ -0.27
PCDHGA4-202ENST00000612927 ADGRA2Q96PE1 1338 aa13.37□□□□□ -0.27
PCDHGA4-202ENST00000612927 TMEM134Q9H6X4 195 aa13.37□□□□□ -0.27
PCDHGA4-202ENST00000612927 STK38LQ9Y2H1 464 aa13.37□□□□□ -0.27
PCDHGA4-202ENST00000612927 PCDHA3Q9Y5H8 950 aa13.37□□□□□ -0.27
PCDHGA4-202ENST00000612927 ZC3H11AO75152 810 aaKnown RBP eCLIP13.36□□□□□ -0.27
PCDHGA4-202ENST00000612927 LGR5O75473 907 aa13.36□□□□□ -0.27
PCDHGA4-202ENST00000612927 RTN3O95197 1032 aaPredicted RBP13.36□□□□□ -0.27
PCDHGA4-202ENST00000612927 UNGP13051 313 aaPredicted RBP13.36□□□□□ -0.27
PCDHGA4-202ENST00000612927 GNAZP19086 355 aa13.36□□□□□ -0.27
PCDHGA4-202ENST00000612927 MKRN3Q13064 507 aaKnown RBP13.36□□□□□ -0.27
PCDHGA4-202ENST00000612927 SPATA21Q7Z572 469 aa13.36□□□□□ -0.27
PCDHGA4-202ENST00000612927 KIF2BQ8N4N8 673 aa13.36□□□□□ -0.27
PCDHGA4-202ENST00000612927 LRRC71Q8N4P6 559 aa13.36□□□□□ -0.27
PCDHGA4-202ENST00000612927 FAM167AQ96KS9 214 aa13.36□□□□□ -0.27
PCDHGA4-202ENST00000612927 MPHOSPH6Q99547 160 aaKnown RBP13.36□□□□□ -0.27
PCDHGA4-202ENST00000612927 FAM167BQ9BTA0 163 aa13.36□□□□□ -0.27
PCDHGA4-202ENST00000612927 ROPN1BQ9BZX4 212 aaPredicted RBP13.36□□□□□ -0.27
PCDHGA4-202ENST00000612927 ROPN1Q9HAT0 212 aaPredicted RBP13.36□□□□□ -0.27
PCDHGA4-202ENST00000612927 APOBEC3GQ9HC16 384 aaKnown RBP13.36□□□□□ -0.27
PCDHGA4-202ENST00000612927 MROH7Q68CQ1 1323 aa13.36□□□□□ -0.27
PCDHGA4-202ENST00000612927 NOP56O00567 594 aaKnown RBP13.36□□□□□ -0.27
PCDHGA4-202ENST00000612927 CYP2C8P10632 490 aa13.36□□□□□ -0.27
PCDHGA4-202ENST00000612927 MAPK4P31152 587 aa13.36□□□□□ -0.27
PCDHGA4-202ENST00000612927 PARP6Q2NL67 630 aa13.36□□□□□ -0.27
PCDHGA4-202ENST00000612927 CCDC62Q6P9F0 684 aa13.36□□□□□ -0.27
PCDHGA4-202ENST00000612927 CCDC105Q8IYK2 499 aa13.36□□□□□ -0.27
PCDHGA4-202ENST00000612927 MCOLN2Q8IZK6 566 aa13.36□□□□□ -0.27
PCDHGA4-202ENST00000612927 GALNT15Q8N3T1 639 aa13.36□□□□□ -0.27
PCDHGA4-202ENST00000612927 DYDC1Q8WWB3 177 aa13.36□□□□□ -0.27
PCDHGA4-202ENST00000612927 FAM210AQ96ND0 272 aa13.36□□□□□ -0.27
PCDHGA4-202ENST00000612927 FGFR1OP2Q9NVK5 253 aa13.36□□□□□ -0.27
PCDHGA4-202ENST00000612927 MTRF1LQ9UGC7 380 aaKnown RBP13.36□□□□□ -0.27
PCDHGA4-202ENST00000612927 PRKAG3Q9UGI9 489 aa13.36□□□□□ -0.27
PCDHGA4-202ENST00000612927 PCYOX1Q9UHG3 505 aa13.36□□□□□ -0.27
PCDHGA4-202ENST00000612927 CNTNAP2Q9UHC6 1331 aa13.36□□□□□ -0.27
PCDHGA4-202ENST00000612927 RASGRF2O14827 1237 aa13.36□□□□□ -0.27
PCDHGA4-202ENST00000612927 SMIM24O75264 130 aa13.36□□□□□ -0.27
PCDHGA4-202ENST00000612927 HSPA6P17066 643 aa13.36□□□□□ -0.27
PCDHGA4-202ENST00000612927 ATP6V1C1P21283 382 aa13.36□□□□□ -0.27
PCDHGA4-202ENST00000612927 COILP38432 576 aaPredicted RBP13.36□□□□□ -0.27
PCDHGA4-202ENST00000612927 SF3A3Q12874 501 aaKnown RBP eCLIP13.36□□□□□ -0.27
PCDHGA4-202ENST00000612927 WDR44Q5JSH3 913 aa13.36□□□□□ -0.27
PCDHGA4-202ENST00000612927 RNF43Q68DV7 783 aa13.36□□□□□ -0.27
PCDHGA4-202ENST00000612927 ENOSF1Q7L5Y1 443 aa13.36□□□□□ -0.27
PCDHGA4-202ENST00000612927 OR5B17Q8NGF7 314 aa13.36□□□□□ -0.27
PCDHGA4-202ENST00000612927 UHMK1Q8TAS1 419 aaKnown RBP13.36□□□□□ -0.27
PCDHGA4-202ENST00000612927 TRAPPC12Q8WVT3 735 aa13.36□□□□□ -0.27
PCDHGA4-202ENST00000612927 C1orf54Q8WWF1 131 aa13.36□□□□□ -0.27
PCDHGA4-202ENST00000612927 SPATA33Q96N06 139 aa13.36□□□□□ -0.27
PCDHGA4-202ENST00000612927 HERPUD2Q9BSE4 406 aa13.36□□□□□ -0.27
PCDHGA4-202ENST00000612927 RNPEPL1Q9HAU8 725 aa13.36□□□□□ -0.27
PCDHGA4-202ENST00000612927 PDGFCQ9NRA1 345 aa13.36□□□□□ -0.27
PCDHGA4-202ENST00000612927 MCM3APO60318 1980 aa13.35□□□□□ -0.27
PCDHGA4-202ENST00000612927 DPPA5A6NC42 116 aa13.35□□□□□ -0.27
PCDHGA4-202ENST00000612927 SMIM23A6NLE4 172 aa13.35□□□□□ -0.27
PCDHGA4-202ENST00000612927 TCP11X1B4DZS4 312 aa13.35□□□□□ -0.27
PCDHGA4-202ENST00000612927 AUHQ13825 339 aaKnown RBP13.35□□□□□ -0.27
PCDHGA4-202ENST00000612927 LDLRAD1Q5T700 205 aa13.35□□□□□ -0.27
PCDHGA4-202ENST00000612927 ANO7Q6IWH7 933 aa13.35□□□□□ -0.27
PCDHGA4-202ENST00000612927 MORC4Q8TE76 937 aa13.35□□□□□ -0.27
PCDHGA4-202ENST00000612927 ATG4AQ8WYN0 398 aa13.35□□□□□ -0.27
PCDHGA4-202ENST00000612927 CGRRF1Q99675 332 aa13.35□□□□□ -0.27
PCDHGA4-202ENST00000612927 CCDC113Q9H0I3 377 aa13.35□□□□□ -0.27
PCDHGA4-202ENST00000612927 MROH8Q9H579 483 aa13.35□□□□□ -0.27
PCDHGA4-202ENST00000612927 TXLNGQ9NUQ3 528 aa13.35□□□□□ -0.27
PCDHGA4-202ENST00000612927 ASB3Q9Y575 518 aa13.35□□□□□ -0.27
PCDHGA4-202ENST00000612927 MSCO60682 206 aa13.35□□□□□ -0.27
PCDHGA4-202ENST00000612927 ATP5HO75947 161 aa13.35□□□□□ -0.27
PCDHGA4-202ENST00000612927 UNC5CO95185 931 aa13.35□□□□□ -0.27
PCDHGA4-202ENST00000612927 LDHAP00338 332 aaKnown RBP13.35□□□□□ -0.27
PCDHGA4-202ENST00000612927 SRGAP2CP0DJJ0 459 aa13.35□□□□□ -0.27
PCDHGA4-202ENST00000612927 GNAT1P11488 350 aa13.35□□□□□ -0.27
PCDHGA4-202ENST00000612927 FGFR4P22455 802 aa13.35□□□□□ -0.27
PCDHGA4-202ENST00000612927 CALB2P22676 271 aa13.35□□□□□ -0.27
PCDHGA4-202ENST00000612927 TNFSF9P41273 254 aa13.35□□□□□ -0.27
PCDHGA4-202ENST00000612927 LAMTOR4Q0VGL1 99 aa13.35□□□□□ -0.27
PCDHGA4-202ENST00000612927 SNX1Q13596 522 aa13.35□□□□□ -0.27
PCDHGA4-202ENST00000612927 IER5Q5VY09 327 aa13.35□□□□□ -0.27
PCDHGA4-202ENST00000612927 TMEM270Q6UE05 265 aa13.35□□□□□ -0.27
PCDHGA4-202ENST00000612927 APBB1IPQ7Z5R6 666 aaPredicted RBP13.35□□□□□ -0.27
PCDHGA4-202ENST00000612927 ZBTB33Q86T24 672 aa13.35□□□□□ -0.27
PCDHGA4-202ENST00000612927 FITM2Q8N6M3 262 aa13.35□□□□□ -0.27
PCDHGA4-202ENST00000612927 EPS8L3Q8TE67 593 aaKnown RBP13.35□□□□□ -0.27
PCDHGA4-202ENST00000612927 RUNDC3BQ96NL0 473 aa13.35□□□□□ -0.27
PCDHGA4-202ENST00000612927 C11orf70Q9BRQ4 267 aa13.35□□□□□ -0.27
PCDHGA4-202ENST00000612927 PCDHB2Q9Y5E7 798 aa13.35□□□□□ -0.27
PCDHGA4-202ENST00000612927 ACO1P21399 889 aaKnown RBP13.34□□□□□ -0.27
PCDHGA4-202ENST00000612927 ATP5DP30049 168 aa13.34□□□□□ -0.27
PCDHGA4-202ENST00000612927 NSFP46459 744 aaKnown RBP13.34□□□□□ -0.27
PCDHGA4-202ENST00000612927 MXRA7P84157 204 aa13.34□□□□□ -0.27
PCDHGA4-202ENST00000612927 SNAPC2Q13487 334 aa13.34□□□□□ -0.27
PCDHGA4-202ENST00000612927 ACVR2BQ13705 512 aa13.34□□□□□ -0.27
PCDHGA4-202ENST00000612927 CYP1B1Q16678 543 aa13.34□□□□□ -0.27
PCDHGA4-202ENST00000612927 MTHFD1LQ6UB35 978 aa13.34□□□□□ -0.27
PCDHGA4-202ENST00000612927 PLPPR4Q7Z2D5 763 aa13.34□□□□□ -0.27
PCDHGA4-202ENST00000612927 ZNF668Q96K58 619 aaPredicted RBP13.34□□□□□ -0.27
PCDHGA4-202ENST00000612927 GGT7Q9UJ14 662 aa13.34□□□□□ -0.27
PCDHGA4-202ENST00000612927 PNMA3Q9UL41 463 aa13.34□□□□□ -0.27
PCDHGA4-202ENST00000612927 MTUS1Q9ULD2 1270 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms