RNA–Protein interactions for RNA: ENST00000612839.1

CCL3L3-201, Transcript of C-C motif chemokine ligand 3 like 3, humanhuman

TSL 1 (best)

Gene CCL3L3, Length 1,458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L3-201ENST00000612839 METTL14Q9HCE5 456 aaKnown RBP12.14□□□□□ -0.47
CCL3L3-201ENST00000612839 TMEM8AQ9HCN3 771 aa12.14□□□□□ -0.47
CCL3L3-201ENST00000612839 DDX43Q9NXZ2 648 aaKnown RBP12.14□□□□□ -0.47
CCL3L3-201ENST00000612839 PCDHGA4Q9Y5G9 962 aa12.14□□□□□ -0.47
CCL3L3-201ENST00000612839 DENND4AQ7Z401 1863 aa12.14□□□□□ -0.47
CCL3L3-201ENST00000612839 HCRTO43612 131 aa12.14□□□□□ -0.47
CCL3L3-201ENST00000612839 LRRN2O75325 713 aa12.14□□□□□ -0.47
CCL3L3-201ENST00000612839 SEC24AO95486 1093 aa12.14□□□□□ -0.47
CCL3L3-201ENST00000612839 ASS1P00966 412 aaKnown RBP12.14□□□□□ -0.47
CCL3L3-201ENST00000612839 HLA-DRAP01903 254 aa12.14□□□□□ -0.47
CCL3L3-201ENST00000612839 PIK3CAP42336 1068 aa12.14□□□□□ -0.47
CCL3L3-201ENST00000612839 MXI1P50539 228 aa12.14□□□□□ -0.47
CCL3L3-201ENST00000612839 MARSP56192 900 aaKnown RBP12.14□□□□□ -0.47
CCL3L3-201ENST00000612839 ADCY1Q08828 1119 aa12.14□□□□□ -0.47
CCL3L3-201ENST00000612839 CBX2Q14781 532 aaPredicted RBP12.14□□□□□ -0.47
CCL3L3-201ENST00000612839 SGSM1Q2NKQ1 1148 aa12.14□□□□□ -0.47
CCL3L3-201ENST00000612839 UVSSAQ2YD98 709 aa12.14□□□□□ -0.47
CCL3L3-201ENST00000612839 CBWD6Q4V339 395 aa12.14□□□□□ -0.47
CCL3L3-201ENST00000612839 CBWD3Q5JTY5 395 aa12.14□□□□□ -0.47
CCL3L3-201ENST00000612839 CBWD5Q5RIA9 395 aa12.14□□□□□ -0.47
CCL3L3-201ENST00000612839 LIN9Q5TKA1 542 aa12.14□□□□□ -0.47
CCL3L3-201ENST00000612839 TCERG1LQ5VWI1 586 aa12.14□□□□□ -0.47
CCL3L3-201ENST00000612839 CES5AQ6NT32 575 aa12.14□□□□□ -0.47
CCL3L3-201ENST00000612839 ELMSAN1Q6PJG2 1045 aa12.14□□□□□ -0.47
CCL3L3-201ENST00000612839 LRRTM3Q86VH5 581 aa12.14□□□□□ -0.47
CCL3L3-201ENST00000612839 SPATA18Q8TC71 538 aa12.14□□□□□ -0.47
CCL3L3-201ENST00000612839 ZNF707Q96C28 371 aaPredicted RBP12.14□□□□□ -0.47
CCL3L3-201ENST00000612839 PGLYRP2Q96PD5 576 aa12.14□□□□□ -0.47
CCL3L3-201ENST00000612839 MMS19Q96T76 1030 aa12.14□□□□□ -0.47
CCL3L3-201ENST00000612839 PI4K2AQ9BTU6 479 aa12.14□□□□□ -0.47
CCL3L3-201ENST00000612839 CRISPLD1Q9H336 500 aa12.14□□□□□ -0.47
CCL3L3-201ENST00000612839 ZDHHC7Q9NXF8 308 aa12.14□□□□□ -0.47
CCL3L3-201ENST00000612839 NXF1Q9UBU9 619 aaKnown RBP12.14□□□□□ -0.47
CCL3L3-201ENST00000612839 AFF4Q9UHB7 1163 aaKnown RBP12.14□□□□□ -0.47
CCL3L3-201ENST00000612839 POLIQ9UNA4 740 aa12.14□□□□□ -0.47
CCL3L3-201ENST00000612839 NME7Q9Y5B8 376 aa12.14□□□□□ -0.47
CCL3L3-201ENST00000612839 MUC3AQ02505 3323 aa12.13□□□□□ -0.47
CCL3L3-201ENST00000612839 DOCK6Q96HP0 2047 aa12.13□□□□□ -0.47
CCL3L3-201ENST00000612839 MTMR11A4FU01 709 aa12.13□□□□□ -0.47
CCL3L3-201ENST00000612839 STX10O60499 249 aa12.13□□□□□ -0.47
CCL3L3-201ENST00000612839 TACC1O75410 805 aa12.13□□□□□ -0.47
CCL3L3-201ENST00000612839 GNA14O95837 355 aa12.13□□□□□ -0.47
CCL3L3-201ENST00000612839 ACAT1P24752 427 aaKnown RBP12.13□□□□□ -0.47
CCL3L3-201ENST00000612839 LMO2P25791 158 aa12.13□□□□□ -0.47
CCL3L3-201ENST00000612839 ERCC5P28715 1186 aaPredicted RBP12.13□□□□□ -0.47
CCL3L3-201ENST00000612839 HOXA9P31269 272 aa12.13□□□□□ -0.47
CCL3L3-201ENST00000612839 LHX1P48742 406 aa12.13□□□□□ -0.47
CCL3L3-201ENST00000612839 TNNC1P63316 161 aa12.13□□□□□ -0.47
CCL3L3-201ENST00000612839 CCDC40Q4G0X9 1142 aa12.13□□□□□ -0.47
CCL3L3-201ENST00000612839 ZNF667Q5HYK9 610 aa12.13□□□□□ -0.47
CCL3L3-201ENST00000612839 PPM1LQ5SGD2 360 aa12.13□□□□□ -0.47
CCL3L3-201ENST00000612839 SPOPLQ6IQ16 392 aa12.13□□□□□ -0.47
CCL3L3-201ENST00000612839 CAVIN1Q6NZI2 390 aaKnown RBP12.13□□□□□ -0.47
CCL3L3-201ENST00000612839 RTL10Q7L3V2 364 aa12.13□□□□□ -0.47
CCL3L3-201ENST00000612839 TRIM59Q8IWR1 403 aa12.13□□□□□ -0.47
CCL3L3-201ENST00000612839 TCEAL8Q8IYN2 117 aa12.13□□□□□ -0.47
CCL3L3-201ENST00000612839 SEMA4DQ92854 862 aa12.13□□□□□ -0.47
CCL3L3-201ENST00000612839 ACBD6Q9BR61 282 aa12.13□□□□□ -0.47
CCL3L3-201ENST00000612839 MRPL45Q9BRJ2 306 aaKnown RBP12.13□□□□□ -0.47
CCL3L3-201ENST00000612839 RHOBTB2Q9BYZ6 727 aa12.13□□□□□ -0.47
CCL3L3-201ENST00000612839 PRKD2Q9BZL6 878 aa12.13□□□□□ -0.47
CCL3L3-201ENST00000612839 POMKQ9H5K3 350 aa12.13□□□□□ -0.47
CCL3L3-201ENST00000612839 CYP4F11Q9HBI6 524 aa12.13□□□□□ -0.47
CCL3L3-201ENST00000612839 DACH1Q9UI36 760 aa12.13□□□□□ -0.47
CCL3L3-201ENST00000612839 FAM50BQ9Y247 325 aa12.13□□□□□ -0.47
CCL3L3-201ENST00000612839 FGFR1OPO95684 399 aaKnown RBP12.12□□□□□ -0.47
CCL3L3-201ENST00000612839 HNRNPA1P09651 372 aaKnown RBP eCLIP12.12□□□□□ -0.47
CCL3L3-201ENST00000612839 WARSP23381 471 aaKnown RBP12.12□□□□□ -0.47
CCL3L3-201ENST00000612839 ELF1P32519 619 aa12.12□□□□□ -0.47
CCL3L3-201ENST00000612839 ASPAP45381 313 aa12.12□□□□□ -0.47
CCL3L3-201ENST00000612839 CDR1P51861 262 aa12.12□□□□□ -0.47
CCL3L3-201ENST00000612839 MYL7Q01449 175 aa12.12□□□□□ -0.47
CCL3L3-201ENST00000612839 DUSP4Q13115 394 aa12.12□□□□□ -0.47
CCL3L3-201ENST00000612839 KLHL40Q2TBA0 621 aa12.12□□□□□ -0.47
CCL3L3-201ENST00000612839 SLC39A12Q504Y0 691 aa12.12□□□□□ -0.47
CCL3L3-201ENST00000612839 INTS6LQ5JSJ4 861 aaKnown RBP12.12□□□□□ -0.47
CCL3L3-201ENST00000612839 ATAT1Q5SQI0 421 aa12.12□□□□□ -0.47
CCL3L3-201ENST00000612839 SASS6Q6UVJ0 657 aa12.12□□□□□ -0.47
CCL3L3-201ENST00000612839 CCDC149Q6ZUS6 474 aa12.12□□□□□ -0.47
CCL3L3-201ENST00000612839 IRF2BP1Q8IU81 584 aa12.12□□□□□ -0.47
CCL3L3-201ENST00000612839 TTC9BQ8N6N2 239 aa12.12□□□□□ -0.47
CCL3L3-201ENST00000612839 ATAD1Q8NBU5 361 aa12.12□□□□□ -0.47
CCL3L3-201ENST00000612839 FBXL13Q8NEE6 735 aa12.12□□□□□ -0.47
CCL3L3-201ENST00000612839 ADAMTS19Q8TE59 1207 aa12.12□□□□□ -0.47
CCL3L3-201ENST00000612839 SMG7Q92540 1137 aaKnown RBP12.12□□□□□ -0.47
CCL3L3-201ENST00000612839 TAF4BQ92750 862 aa12.12□□□□□ -0.47
CCL3L3-201ENST00000612839 NECAB3Q96P71 396 aaPredicted RBP12.12□□□□□ -0.47
CCL3L3-201ENST00000612839 PKMYT1Q99640 499 aa12.12□□□□□ -0.47
CCL3L3-201ENST00000612839 SDCBP2Q9H190 292 aa12.12□□□□□ -0.47
CCL3L3-201ENST00000612839 SMYD3Q9H7B4 428 aa12.12□□□□□ -0.47
CCL3L3-201ENST00000612839 APOBEC3GQ9HC16 384 aaKnown RBP12.12□□□□□ -0.47
CCL3L3-201ENST00000612839 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.12□□□□□ -0.47
CCL3L3-201ENST00000612839 TMLHEQ9NVH6 421 aa12.12□□□□□ -0.47
CCL3L3-201ENST00000612839 MAFFQ9ULX9 164 aa12.12□□□□□ -0.47
CCL3L3-201ENST00000612839 LHX6Q9UPM6 363 aa12.12□□□□□ -0.47
CCL3L3-201ENST00000612839 COQ4Q9Y3A0 265 aa12.12□□□□□ -0.47
CCL3L3-201ENST00000612839 INSL5Q9Y5Q6 135 aa12.12□□□□□ -0.47
CCL3L3-201ENST00000612839 PRRG1O14668 218 aa12.11□□□□□ -0.47
CCL3L3-201ENST00000612839 CCL16O15467 120 aa12.11□□□□□ -0.47
CCL3L3-201ENST00000612839 CLSTN1O94985 981 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms