RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 ZNF286BP0CG31 522 aa14.89□□□□□ -0.03
PCDHGA3-202ENST00000612467 SLC20A2Q08357 652 aa14.89□□□□□ -0.03
PCDHGA3-202ENST00000612467 ERICH1Q86X53 443 aa14.89□□□□□ -0.03
PCDHGA3-202ENST00000612467 EXD1Q8NHP7 514 aa14.89□□□□□ -0.03
PCDHGA3-202ENST00000612467 MMP19Q99542 508 aa14.89□□□□□ -0.03
PCDHGA3-202ENST00000612467 KCNK9Q9NPC2 374 aa14.89□□□□□ -0.03
PCDHGA3-202ENST00000612467 PCSK1NQ9UHG2 260 aa14.89□□□□□ -0.03
PCDHGA3-202ENST00000612467 PPP2R3BQ9Y5P8 575 aa14.89□□□□□ -0.03
PCDHGA3-202ENST00000612467 SCINQ9Y6U3 715 aa14.89□□□□□ -0.03
PCDHGA3-202ENST00000612467 A0A0G2JMZ2 1700 aa14.89□□□□□ -0.03
PCDHGA3-202ENST00000612467 LRRC37A2A6NM11 1700 aa14.89□□□□□ -0.03
PCDHGA3-202ENST00000612467 A0A087WZ62 844 aa14.88□□□□□ -0.03
PCDHGA3-202ENST00000612467 HGSO14964 777 aaPredicted RBP14.88□□□□□ -0.03
PCDHGA3-202ENST00000612467 AGTP01019 485 aa14.88□□□□□ -0.03
PCDHGA3-202ENST00000612467 ITGB3P05106 788 aa14.88□□□□□ -0.03
PCDHGA3-202ENST00000612467 VIMP08670 466 aaKnown RBP14.88□□□□□ -0.03
PCDHGA3-202ENST00000612467 KLRC2P26717 231 aa14.88□□□□□ -0.03
PCDHGA3-202ENST00000612467 PLCB3Q01970 1234 aa14.88□□□□□ -0.03
PCDHGA3-202ENST00000612467 CNGA2Q16280 664 aa14.88□□□□□ -0.03
PCDHGA3-202ENST00000612467 CCNG2Q16589 344 aa14.88□□□□□ -0.03
PCDHGA3-202ENST00000612467 MPZL3Q6UWV2 235 aa14.88□□□□□ -0.03
PCDHGA3-202ENST00000612467 VSTM1Q6UX27 236 aa14.88□□□□□ -0.03
PCDHGA3-202ENST00000612467 CPXM1Q96SM3 734 aa14.88□□□□□ -0.03
PCDHGA3-202ENST00000612467 ELAC2Q9BQ52 826 aaKnown RBP14.88□□□□□ -0.03
PCDHGA3-202ENST00000612467 FDXACB1Q9BRP7 624 aaPredicted RBP14.88□□□□□ -0.03
PCDHGA3-202ENST00000612467 PTPRHQ9HD43 1115 aa14.88□□□□□ -0.03
PCDHGA3-202ENST00000612467 RNF181Q9P0P0 153 aa14.88□□□□□ -0.03
PCDHGA3-202ENST00000612467 IP6K2Q9UHH9 426 aa14.88□□□□□ -0.03
PCDHGA3-202ENST00000612467 ANK1P16157 1881 aa14.88□□□□□ -0.03
PCDHGA3-202ENST00000612467 TMEM120BA0PK00 339 aa14.88□□□□□ -0.03
PCDHGA3-202ENST00000612467 LIASO43766 372 aa14.88□□□□□ -0.03
PCDHGA3-202ENST00000612467 ARSEP51690 589 aa14.88□□□□□ -0.03
PCDHGA3-202ENST00000612467 EFNA5P52803 228 aa14.88□□□□□ -0.03
PCDHGA3-202ENST00000612467 LACTBP83111 547 aaPredicted RBP14.88□□□□□ -0.03
PCDHGA3-202ENST00000612467 MBTD1Q05BQ5 628 aa14.88□□□□□ -0.03
PCDHGA3-202ENST00000612467 ENPEPQ07075 957 aa14.88□□□□□ -0.03
PCDHGA3-202ENST00000612467 KCTD2Q14681 263 aa14.88□□□□□ -0.03
PCDHGA3-202ENST00000612467 SGSM1Q2NKQ1 1148 aa14.88□□□□□ -0.03
PCDHGA3-202ENST00000612467 SH3PXD2AQ5TCZ1 1133 aa14.88□□□□□ -0.03
PCDHGA3-202ENST00000612467 SPOCD1Q6ZMY3 1216 aa14.88□□□□□ -0.03
PCDHGA3-202ENST00000612467 PAXIP1Q6ZW49 1069 aaPredicted RBP14.88□□□□□ -0.03
PCDHGA3-202ENST00000612467 C1orf127Q8N9H9 656 aa14.88□□□□□ -0.03
PCDHGA3-202ENST00000612467 OPTNQ96CV9 577 aa14.88□□□□□ -0.03
PCDHGA3-202ENST00000612467 TRAIPQ9BWF2 469 aa14.88□□□□□ -0.03
PCDHGA3-202ENST00000612467 IGKV6-21A0A0C4DH24 114 aa14.87□□□□□ -0.03
PCDHGA3-202ENST00000612467 LACTBL1A8MY62 500 aa14.87□□□□□ -0.03
PCDHGA3-202ENST00000612467 GBP1P32455 592 aa14.87□□□□□ -0.03
PCDHGA3-202ENST00000612467 GDF10P55107 478 aa14.87□□□□□ -0.03
PCDHGA3-202ENST00000612467 GPS1Q13098 491 aa14.87□□□□□ -0.03
PCDHGA3-202ENST00000612467 MOGSQ13724 837 aa14.87□□□□□ -0.03
PCDHGA3-202ENST00000612467 TNFAIP8L3Q5GJ75 292 aa14.87□□□□□ -0.03
PCDHGA3-202ENST00000612467 JADE1Q6IE81 842 aa14.87□□□□□ -0.03
PCDHGA3-202ENST00000612467 CCDC62Q6P9F0 684 aa14.87□□□□□ -0.03
PCDHGA3-202ENST00000612467 TRMT10CQ7L0Y3 403 aaKnown RBP14.87□□□□□ -0.03
PCDHGA3-202ENST00000612467 CACNA2D3Q8IZS8 1091 aa14.87□□□□□ -0.03
PCDHGA3-202ENST00000612467 TMEM35BQ8NCS4 154 aa14.87□□□□□ -0.03
PCDHGA3-202ENST00000612467 UBA3Q8TBC4 463 aa14.87□□□□□ -0.03
PCDHGA3-202ENST00000612467 LRRN4Q8WUT4 740 aa14.87□□□□□ -0.03
PCDHGA3-202ENST00000612467 RUNDC3BQ96NL0 473 aa14.87□□□□□ -0.03
PCDHGA3-202ENST00000612467 CNOT10Q9H9A5 744 aaKnown RBP14.87□□□□□ -0.03
PCDHGA3-202ENST00000612467 TGFB3P10600 412 aa14.87□□□□□ -0.03
PCDHGA3-202ENST00000612467 INSRRP14616 1297 aa14.87□□□□□ -0.03
PCDHGA3-202ENST00000612467 ZKSCAN8Q15776 578 aaPredicted RBP14.87□□□□□ -0.03
PCDHGA3-202ENST00000612467 KCNV1Q6PIU1 500 aa14.87□□□□□ -0.03
PCDHGA3-202ENST00000612467 SRRM1Q8IYB3 904 aaKnown RBP14.87□□□□□ -0.03
PCDHGA3-202ENST00000612467 PIWIL1Q96J94 861 aaKnown RBP14.87□□□□□ -0.03
PCDHGA3-202ENST00000612467 VCPIP1Q96JH7 1222 aa14.87□□□□□ -0.03
PCDHGA3-202ENST00000612467 RBM15Q96T37 977 aaKnown RBP eCLIP14.87□□□□□ -0.03
PCDHGA3-202ENST00000612467 KIF9Q9HAQ2 790 aa14.87□□□□□ -0.03
PCDHGA3-202ENST00000612467 IFT122Q9HBG6 1241 aa14.87□□□□□ -0.03
PCDHGA3-202ENST00000612467 SAYSD1Q9NPB0 183 aa14.87□□□□□ -0.03
PCDHGA3-202ENST00000612467 METTL5Q9NRN9 209 aaKnown RBP14.87□□□□□ -0.03
PCDHGA3-202ENST00000612467 KCNG1Q9UIX4 513 aa14.87□□□□□ -0.03
PCDHGA3-202ENST00000612467 GINS2Q9Y248 185 aa14.87□□□□□ -0.03
PCDHGA3-202ENST00000612467 H0YHG0 523 aa14.86□□□□□ -0.03
PCDHGA3-202ENST00000612467 ACKR2O00590 384 aa14.86□□□□□ -0.03
PCDHGA3-202ENST00000612467 LGR5O75473 907 aa14.86□□□□□ -0.03
PCDHGA3-202ENST00000612467 GRAP2O75791 330 aa14.86□□□□□ -0.03
PCDHGA3-202ENST00000612467 ERBB2P04626 1255 aa14.86□□□□□ -0.03
PCDHGA3-202ENST00000612467 PROZP22891 400 aa14.86□□□□□ -0.03
PCDHGA3-202ENST00000612467 PSMA2P25787 234 aa14.86□□□□□ -0.03
PCDHGA3-202ENST00000612467 ABCD1P33897 745 aa14.86□□□□□ -0.03
PCDHGA3-202ENST00000612467 GJA5P36382 358 aa14.86□□□□□ -0.03
PCDHGA3-202ENST00000612467 MXD4Q14582 209 aaPredicted RBP14.86□□□□□ -0.03
PCDHGA3-202ENST00000612467 PPP1R15BQ5SWA1 713 aa14.86□□□□□ -0.03
PCDHGA3-202ENST00000612467 GRK7Q8WTQ7 553 aa14.86□□□□□ -0.03
PCDHGA3-202ENST00000612467 CDCA5Q96FF9 252 aa14.86□□□□□ -0.03
PCDHGA3-202ENST00000612467 FZD8Q9H461 694 aa14.86□□□□□ -0.03
PCDHGA3-202ENST00000612467 hCG_1818297A0A087WSY0 165 aa14.86□□□□□ -0.03
PCDHGA3-202ENST00000612467 GOLGA6L7A0A1B0GV03 622 aa14.86□□□□□ -0.03
PCDHGA3-202ENST00000612467 C5orf60A6NFR6 353 aa14.86□□□□□ -0.03
PCDHGA3-202ENST00000612467 PECAM1P16284 738 aaPredicted RBP14.86□□□□□ -0.03
PCDHGA3-202ENST00000612467 IREB2P48200 963 aaKnown RBP14.86□□□□□ -0.03
PCDHGA3-202ENST00000612467 RAD23BP54727 409 aa14.86□□□□□ -0.03
PCDHGA3-202ENST00000612467 TMEM62Q0P6H9 643 aa14.86□□□□□ -0.03
PCDHGA3-202ENST00000612467 GKAP1Q5VSY0 366 aaPredicted RBP14.86□□□□□ -0.03
PCDHGA3-202ENST00000612467 TSHZ1Q6ZSZ6 1077 aa14.86□□□□□ -0.03
PCDHGA3-202ENST00000612467 ANKMY2Q8IV38 441 aa14.86□□□□□ -0.03
PCDHGA3-202ENST00000612467 CCDC13Q8IYE1 715 aa14.86□□□□□ -0.03
PCDHGA3-202ENST00000612467 ELOVL4Q9GZR5 314 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms