RNA–Protein interactions for RNA: ENST00000612311.4

TMCO1-208, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 1 (best) BASIC

Gene TMCO1, Length 4,468 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-208ENST00000612311 SCOCQ9UIL1 159 aa9□□□□□ -0.97
TMCO1-208ENST00000612311 BCL9LQ86UU0 1499 aa9□□□□□ -0.97
TMCO1-208ENST00000612311 RCCD1A6NED2 376 aa9□□□□□ -0.97
TMCO1-208ENST00000612311 CES2O00748 559 aa9□□□□□ -0.97
TMCO1-208ENST00000612311 VDRP11473 427 aa9□□□□□ -0.97
TMCO1-208ENST00000612311 HNRNPH3P31942 346 aaKnown RBP9□□□□□ -0.97
TMCO1-208ENST00000612311 GNL1P36915 607 aaPredicted RBP9□□□□□ -0.97
TMCO1-208ENST00000612311 ORC1Q13415 861 aa9□□□□□ -0.97
TMCO1-208ENST00000612311 TSTA3Q13630 321 aaPredicted RBP9□□□□□ -0.97
TMCO1-208ENST00000612311 SV2CQ496J9 727 aa9□□□□□ -0.97
TMCO1-208ENST00000612311 TFDP3Q5H9I0 405 aa9□□□□□ -0.97
TMCO1-208ENST00000612311 KCNT1Q5JUK3 1230 aa9□□□□□ -0.97
TMCO1-208ENST00000612311 EFHC1Q5JVL4 640 aa9□□□□□ -0.97
TMCO1-208ENST00000612311 GLRA4Q5JXX5 417 aa9□□□□□ -0.97
TMCO1-208ENST00000612311 C1orf146Q5VVC0 180 aa9□□□□□ -0.97
TMCO1-208ENST00000612311 FBXW10Q5XX13 1052 aa9□□□□□ -0.97
TMCO1-208ENST00000612311 EXD1Q8NHP7 514 aa9□□□□□ -0.97
TMCO1-208ENST00000612311 FAM161BQ96MY7 647 aa9□□□□□ -0.97
TMCO1-208ENST00000612311 MTFR1LQ9H019 292 aa9□□□□□ -0.97
TMCO1-208ENST00000612311 VPS33BQ9H267 617 aa9□□□□□ -0.97
TMCO1-208ENST00000612311 SP110Q9HB58 689 aa9□□□□□ -0.97
TMCO1-208ENST00000612311 A1CFQ9NQ94 594 aaKnown RBP9□□□□□ -0.97
TMCO1-208ENST00000612311 KIAA1257Q9ULG3 409 aa9□□□□□ -0.97
TMCO1-208ENST00000612311 UBQLN1Q9UMX0 589 aaKnown RBP9□□□□□ -0.97
TMCO1-208ENST00000612311 C3orf70A6NLC5 250 aaPredicted RBP9□□□□□ -0.97
TMCO1-208ENST00000612311 TISP43B9A030 160 aa9□□□□□ -0.97
TMCO1-208ENST00000612311 CAND2O75155 1236 aa9□□□□□ -0.97
TMCO1-208ENST00000612311 SNRPAP09012 282 aaKnown RBP9□□□□□ -0.97
TMCO1-208ENST00000612311 CASP2P42575 452 aa9□□□□□ -0.97
TMCO1-208ENST00000612311 SERPINB9P50453 376 aa9□□□□□ -0.97
TMCO1-208ENST00000612311 PPP3CAQ08209 521 aa9□□□□□ -0.97
TMCO1-208ENST00000612311 BTNL9Q6UXG8 535 aa9□□□□□ -0.97
TMCO1-208ENST00000612311 MAP4K3Q8IVH8 894 aa9□□□□□ -0.97
TMCO1-208ENST00000612311 MCOLN2Q8IZK6 566 aa9□□□□□ -0.97
TMCO1-208ENST00000612311 ZNF606Q8WXB4 792 aa9□□□□□ -0.97
TMCO1-208ENST00000612311 CLMNQ96JQ2 1002 aa9□□□□□ -0.97
TMCO1-208ENST00000612311 HSD17B14Q9BPX1 270 aa9□□□□□ -0.97
TMCO1-208ENST00000612311 WDR18Q9BV38 432 aa9□□□□□ -0.97
TMCO1-208ENST00000612311 FRMD8Q9BZ67 464 aaPredicted RBP9□□□□□ -0.97
TMCO1-208ENST00000612311 CDC42EP4Q9H3Q1 356 aaKnown RBP9□□□□□ -0.97
TMCO1-208ENST00000612311 USP20Q9Y2K6 914 aa9□□□□□ -0.97
TMCO1-208ENST00000612311 CCT8L1PA6NM43 557 aa8.99□□□□□ -0.97
TMCO1-208ENST00000612311 RNF225M0QZC1 329 aaPredicted RBP8.99□□□□□ -0.97
TMCO1-208ENST00000612311 RPS6KA5O75582 802 aa8.99□□□□□ -0.97
TMCO1-208ENST00000612311 CYP2C8P10632 490 aa8.99□□□□□ -0.97
TMCO1-208ENST00000612311 PCSK1P29120 753 aa8.99□□□□□ -0.97
TMCO1-208ENST00000612311 CTCFP49711 727 aaPredicted RBP8.99□□□□□ -0.97
TMCO1-208ENST00000612311 PDK1Q15118 436 aa8.99□□□□□ -0.97
TMCO1-208ENST00000612311 CCNG2Q16589 344 aa8.99□□□□□ -0.97
TMCO1-208ENST00000612311 COBLL1Q53SF7 1204 aa8.99□□□□□ -0.97
TMCO1-208ENST00000612311 MTHFD1LQ6UB35 978 aa8.99□□□□□ -0.97
TMCO1-208ENST00000612311 ETNPPLQ8TBG4 499 aa8.99□□□□□ -0.97
TMCO1-208ENST00000612311 PDCD6IPQ8WUM4 868 aaKnown RBP8.99□□□□□ -0.97
TMCO1-208ENST00000612311 ERP27Q96DN0 273 aa8.99□□□□□ -0.97
TMCO1-208ENST00000612311 KIF9Q9HAQ2 790 aa8.99□□□□□ -0.97
TMCO1-208ENST00000612311 NPHS2Q9NP85 383 aa8.99□□□□□ -0.97
TMCO1-208ENST00000612311 ADARB2Q9NS39 739 aaKnown RBP8.99□□□□□ -0.97
TMCO1-208ENST00000612311 SLC38A7Q9NVC3 462 aa8.99□□□□□ -0.97
TMCO1-208ENST00000612311 PPP2R3BQ9Y5P8 575 aa8.99□□□□□ -0.97
TMCO1-208ENST00000612311 DFFAO00273 331 aa8.99□□□□□ -0.97
TMCO1-208ENST00000612311 LSM8O95777 96 aaKnown RBP8.99□□□□□ -0.97
TMCO1-208ENST00000612311 STAG3L1P0CL83 205 aa8.99□□□□□ -0.97
TMCO1-208ENST00000612311 SNHG28P0DPA3 235 aa8.99□□□□□ -0.97
TMCO1-208ENST00000612311 TAF6P49848 677 aa8.99□□□□□ -0.97
TMCO1-208ENST00000612311 SH3BGRP55822 239 aaPredicted RBP8.99□□□□□ -0.97
TMCO1-208ENST00000612311 C1QBPQ07021 282 aaKnown RBP8.99□□□□□ -0.97
TMCO1-208ENST00000612311 ANKRD20A4Q4UJ75 823 aa8.99□□□□□ -0.97
TMCO1-208ENST00000612311 ANKRD20A8PQ5CZ79 823 aa8.99□□□□□ -0.97
TMCO1-208ENST00000612311 ANKRD20A2Q5SQ80 823 aa8.99□□□□□ -0.97
TMCO1-208ENST00000612311 ANKRD20A1Q5TYW2 823 aa8.99□□□□□ -0.97
TMCO1-208ENST00000612311 VSIG10LQ86VR7 867 aa8.99□□□□□ -0.97
TMCO1-208ENST00000612311 TMEM139Q8IV31 216 aa8.99□□□□□ -0.97
TMCO1-208ENST00000612311 KAT5Q92993 513 aa8.99□□□□□ -0.97
TMCO1-208ENST00000612311 GLIS2Q9BZE0 524 aaPredicted RBP8.99□□□□□ -0.97
TMCO1-208ENST00000612311 UPF3AQ9H1J1 476 aaKnown RBP8.99□□□□□ -0.97
TMCO1-208ENST00000612311 GANQ9H2C0 597 aa8.99□□□□□ -0.97
TMCO1-208ENST00000612311 SEMA4AQ9H3S1 761 aa8.99□□□□□ -0.97
TMCO1-208ENST00000612311 TRIM33Q9UPN9 1127 aa8.99□□□□□ -0.97
TMCO1-208ENST00000612311 ASTN1O14525 1302 aa8.99□□□□□ -0.97
TMCO1-208ENST00000612311 SPATA31C1P0DKV0 1188 aa8.99□□□□□ -0.97
TMCO1-208ENST00000612311 CPB1P15086 417 aa8.99□□□□□ -0.97
TMCO1-208ENST00000612311 PPARGP37231 505 aaPredicted RBP8.99□□□□□ -0.97
TMCO1-208ENST00000612311 PNPLA4P41247 253 aa8.99□□□□□ -0.97
TMCO1-208ENST00000612311 CORO7P57737 925 aa8.99□□□□□ -0.97
TMCO1-208ENST00000612311 PTPN11Q06124 597 aaPredicted RBP8.99□□□□□ -0.97
TMCO1-208ENST00000612311 CACNB2Q08289 660 aaPredicted RBP8.99□□□□□ -0.97
TMCO1-208ENST00000612311 LAMTOR4Q0VGL1 99 aa8.99□□□□□ -0.97
TMCO1-208ENST00000612311 DCAF4L1Q3SXM0 396 aa8.99□□□□□ -0.97
TMCO1-208ENST00000612311 TATDN1Q6P1N9 297 aa8.99□□□□□ -0.97
TMCO1-208ENST00000612311 FOXR2Q6PJQ5 311 aa8.99□□□□□ -0.97
TMCO1-208ENST00000612311 LVRNQ6Q4G3 990 aa8.99□□□□□ -0.97
TMCO1-208ENST00000612311 ZNF662Q6ZS27 426 aa8.99□□□□□ -0.97
TMCO1-208ENST00000612311 CD302Q8IX05 232 aa8.99□□□□□ -0.97
TMCO1-208ENST00000612311 LRRC34Q8IZ02 419 aa8.99□□□□□ -0.97
TMCO1-208ENST00000612311 ELMO3Q96BJ8 720 aa8.99□□□□□ -0.97
TMCO1-208ENST00000612311 ZNF446Q9NWS9 450 aa8.99□□□□□ -0.97
TMCO1-208ENST00000612311 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.99□□□□□ -0.978e-6■□□□□ 8.7
TMCO1-208ENST00000612311 A0A087WZ62 844 aa8.99□□□□□ -0.97
TMCO1-208ENST00000612311 EEF2KO00418 725 aaKnown RBP8.99□□□□□ -0.97
TMCO1-208ENST00000612311 ADCY3O60266 1144 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms