RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 FAM81BQ96LP2 452 aa14.81□□□□□ -0.04
COL6A1-207ENST00000612273 ST6GALNAC4Q9H4F1 302 aa14.81□□□□□ -0.04
COL6A1-207ENST00000612273 AVENQ9NQS1 362 aaPredicted RBP14.81□□□□□ -0.04
COL6A1-207ENST00000612273 METTL5Q9NRN9 209 aaKnown RBP14.81□□□□□ -0.04
COL6A1-207ENST00000612273 CEP350Q5VT06 3117 aa14.81□□□□□ -0.04
COL6A1-207ENST00000612273 DNALI1O14645 258 aaPredicted RBP14.81□□□□□ -0.04
COL6A1-207ENST00000612273 AVILO75366 819 aa14.81□□□□□ -0.04
COL6A1-207ENST00000612273 LYPLA2O95372 231 aa14.81□□□□□ -0.04
COL6A1-207ENST00000612273 ASMTLO95671 621 aa14.81□□□□□ -0.04
COL6A1-207ENST00000612273 ATP2A2P16615 1042 aaKnown RBP14.81□□□□□ -0.04
COL6A1-207ENST00000612273 PSMA2P25787 234 aa14.81□□□□□ -0.04
COL6A1-207ENST00000612273 RAD23BP54727 409 aa14.81□□□□□ -0.04
COL6A1-207ENST00000612273 FKBP1AP62942 108 aaKnown RBP14.81□□□□□ -0.04
COL6A1-207ENST00000612273 OTUD4Q01804 1114 aaKnown RBP14.81□□□□□ -0.04
COL6A1-207ENST00000612273 HIF1AQ16665 826 aa14.81□□□□□ -0.04
COL6A1-207ENST00000612273 EAPPQ56P03 285 aaPredicted RBP14.81□□□□□ -0.04
COL6A1-207ENST00000612273 ANKRD20A2Q5SQ80 823 aa14.81□□□□□ -0.04
COL6A1-207ENST00000612273 FNBP1LQ5T0N5 605 aa14.81□□□□□ -0.04
COL6A1-207ENST00000612273 ANKRD20A1Q5TYW2 823 aa14.81□□□□□ -0.04
COL6A1-207ENST00000612273 ANKRD20A3Q5VUR7 823 aa14.81□□□□□ -0.04
COL6A1-207ENST00000612273 STYK1Q6J9G0 422 aa14.81□□□□□ -0.04
COL6A1-207ENST00000612273 CTAGE3PQ8IX95 158 aa14.81□□□□□ -0.04
COL6A1-207ENST00000612273 PALM2Q8IXS6 379 aa14.81□□□□□ -0.04
COL6A1-207ENST00000612273 GBP7Q8N8V2 638 aaPredicted RBP14.81□□□□□ -0.04
COL6A1-207ENST00000612273 MCPH1Q8NEM0 835 aa14.81□□□□□ -0.04
COL6A1-207ENST00000612273 EXD1Q8NHP7 514 aa14.81□□□□□ -0.04
COL6A1-207ENST00000612273 TFAP2BQ92481 460 aa14.81□□□□□ -0.04
COL6A1-207ENST00000612273 SPDL1Q96EA4 605 aa14.81□□□□□ -0.04
COL6A1-207ENST00000612273 ARHGEF3Q9NR81 526 aa14.81□□□□□ -0.04
COL6A1-207ENST00000612273 GLRA2P23416 452 aa14.8□□□□□ -0.04
COL6A1-207ENST00000612273 CAV1Q03135 178 aa14.8□□□□□ -0.04
COL6A1-207ENST00000612273 LRRC6Q86X45 466 aa14.8□□□□□ -0.04
COL6A1-207ENST00000612273 TRIM50Q86XT4 487 aa14.8□□□□□ -0.04
COL6A1-207ENST00000612273 JOSD2Q8TAC2 188 aa14.8□□□□□ -0.04
COL6A1-207ENST00000612273 RSAD2Q8WXG1 361 aa14.8□□□□□ -0.04
COL6A1-207ENST00000612273 SLC7A3Q8WY07 619 aa14.8□□□□□ -0.04
COL6A1-207ENST00000612273 SLCO2A1Q92959 643 aa14.8□□□□□ -0.04
COL6A1-207ENST00000612273 PRKAG3Q9UGI9 489 aa14.8□□□□□ -0.04
COL6A1-207ENST00000612273 PSTPIP1O43586 416 aa14.8□□□□□ -0.04
COL6A1-207ENST00000612273 ONECUT3O60422 494 aaPredicted RBP14.8□□□□□ -0.04
COL6A1-207ENST00000612273 IRX4P78413 519 aa14.8□□□□□ -0.04
COL6A1-207ENST00000612273 MAPK6Q16659 721 aa14.8□□□□□ -0.04
COL6A1-207ENST00000612273 CENPUQ71F23 418 aa14.8□□□□□ -0.04
COL6A1-207ENST00000612273 OTOAQ7RTW8 1153 aa14.8□□□□□ -0.04
COL6A1-207ENST00000612273 NIM1KQ8IY84 436 aa14.8□□□□□ -0.04
COL6A1-207ENST00000612273 KATNAL2Q8IYT4 538 aa14.8□□□□□ -0.04
COL6A1-207ENST00000612273 DTX3LQ8TDB6 740 aa14.8□□□□□ -0.04
COL6A1-207ENST00000612273 TRIM11Q96F44 468 aa14.8□□□□□ -0.04
COL6A1-207ENST00000612273 NUDCD1Q96RS6 583 aa14.8□□□□□ -0.04
COL6A1-207ENST00000612273 FBXO6Q9NRD1 293 aaPredicted RBP14.8□□□□□ -0.04
COL6A1-207ENST00000612273 ATP2A1O14983 1001 aa14.79□□□□□ -0.04
COL6A1-207ENST00000612273 TRPC3Q13507 836 aa14.79□□□□□ -0.04
COL6A1-207ENST00000612273 DLK2Q6UY11 383 aa14.79□□□□□ -0.04
COL6A1-207ENST00000612273 ENOSF1Q7L5Y1 443 aa14.79□□□□□ -0.04
COL6A1-207ENST00000612273 SAMD3Q8N6K7 520 aa14.79□□□□□ -0.04
COL6A1-207ENST00000612273 RFWD2Q8NHY2 731 aa14.79□□□□□ -0.04
COL6A1-207ENST00000612273 TCP10LQ8TDR4 215 aa14.79□□□□□ -0.04
COL6A1-207ENST00000612273 PRR11Q96HE9 360 aaPredicted RBP14.79□□□□□ -0.04
COL6A1-207ENST00000612273 L3MBTL3Q96JM7 780 aaPredicted RBP14.79□□□□□ -0.04
COL6A1-207ENST00000612273 TBC1D10AQ9BXI6 508 aa14.79□□□□□ -0.04
COL6A1-207ENST00000612273 IP6K2Q9UHH9 426 aa14.79□□□□□ -0.04
COL6A1-207ENST00000612273 NUMBLQ9Y6R0 609 aa14.79□□□□□ -0.04
COL6A1-207ENST00000612273 ANKRD31Q8N7Z5 1873 aa14.79□□□□□ -0.04
COL6A1-207ENST00000612273 ZNF831Q5JPB2 1677 aa14.79□□□□□ -0.04
COL6A1-207ENST00000612273 MAPK13O15264 365 aa14.79□□□□□ -0.04
COL6A1-207ENST00000612273 KCNA2P16389 499 aa14.79□□□□□ -0.04
COL6A1-207ENST00000612273 GM2AP17900 193 aa14.79□□□□□ -0.04
COL6A1-207ENST00000612273 GARTP22102 1010 aa14.79□□□□□ -0.04
COL6A1-207ENST00000612273 ALDH3A1P30838 453 aa14.79□□□□□ -0.04
COL6A1-207ENST00000612273 PCK1P35558 622 aa14.79□□□□□ -0.04
COL6A1-207ENST00000612273 RAB6CQ53S08 254 aa14.79□□□□□ -0.04
COL6A1-207ENST00000612273 TLDC1Q6P9B6 456 aa14.79□□□□□ -0.04
COL6A1-207ENST00000612273 NPNTQ6UXI9 565 aa14.79□□□□□ -0.04
COL6A1-207ENST00000612273 SYDE1Q6ZW31 735 aaPredicted RBP14.79□□□□□ -0.04
COL6A1-207ENST00000612273 TTLL6Q8N841 843 aa14.79□□□□□ -0.04
COL6A1-207ENST00000612273 FBXO36Q8NEA4 188 aa14.79□□□□□ -0.04
COL6A1-207ENST00000612273 RAB6CQ9H0N0 254 aa14.79□□□□□ -0.04
COL6A1-207ENST00000612273 CISHQ9NSE2 258 aa14.79□□□□□ -0.04
COL6A1-207ENST00000612273 ARHGAP28Q9P2N2 729 aa14.79□□□□□ -0.04
COL6A1-207ENST00000612273 POLIQ9UNA4 740 aa14.79□□□□□ -0.04
COL6A1-207ENST00000612273 YWHAGP61981 247 aaKnown RBP eCLIP14.79□□□□□ -0.04
COL6A1-207ENST00000612273 PSMD6Q15008 389 aa14.79□□□□□ -0.04
COL6A1-207ENST00000612273 PLEKHG4Q58EX7 1191 aa14.79□□□□□ -0.04
COL6A1-207ENST00000612273 PLEKHA7Q6IQ23 1121 aa14.79□□□□□ -0.04
COL6A1-207ENST00000612273 APBB1IPQ7Z5R6 666 aaPredicted RBP14.79□□□□□ -0.04
COL6A1-207ENST00000612273 BBOF1Q8ND07 529 aa14.79□□□□□ -0.04
COL6A1-207ENST00000612273 NSUN6Q8TEA1 469 aaKnown RBP14.79□□□□□ -0.04
COL6A1-207ENST00000612273 ZNF75CPQ92670 426 aaPredicted RBP14.79□□□□□ -0.04
COL6A1-207ENST00000612273 ARMCX1Q9P291 453 aa14.79□□□□□ -0.04
COL6A1-207ENST00000612273 MARCOQ9UEW3 520 aaPredicted RBP14.79□□□□□ -0.04
COL6A1-207ENST00000612273 SCINQ9Y6U3 715 aa14.79□□□□□ -0.04
COL6A1-207ENST00000612273 CCDC195A0A1B0GUA6 201 aa14.78□□□□□ -0.04
COL6A1-207ENST00000612273 FAM155BO75949 473 aa14.78□□□□□ -0.04
COL6A1-207ENST00000612273 KITP10721 976 aa14.78□□□□□ -0.04
COL6A1-207ENST00000612273 ATP4AP20648 1035 aa14.78□□□□□ -0.04
COL6A1-207ENST00000612273 GPX6P59796 221 aa14.78□□□□□ -0.04
COL6A1-207ENST00000612273 MMRN1Q13201 1228 aa14.78□□□□□ -0.04
COL6A1-207ENST00000612273 BZW1Q7L1Q6 419 aaKnown RBP14.78□□□□□ -0.04
COL6A1-207ENST00000612273 NLRP9Q7RTR0 991 aa14.78□□□□□ -0.04
COL6A1-207ENST00000612273 RPAINQ86UA6 219 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms