RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 CASP10Q92851 521 aa9.46□□□□□ -0.89
SMAD4-217ENST00000611848 B3GALT6Q96L58 329 aa9.46□□□□□ -0.89
SMAD4-217ENST00000611848 SENP8Q96LD8 212 aa9.46□□□□□ -0.89
SMAD4-217ENST00000611848 CEP63Q96MT8 703 aa9.46□□□□□ -0.89
SMAD4-217ENST00000611848 POP1Q99575 1024 aaKnown RBP9.46□□□□□ -0.89
SMAD4-217ENST00000611848 OXCT2Q9BYC2 517 aaPredicted RBP9.46□□□□□ -0.89
SMAD4-217ENST00000611848 UBE2ZQ9H832 354 aaPredicted RBP9.46□□□□□ -0.89
SMAD4-217ENST00000611848 THEGQ9P2T0 379 aa9.46□□□□□ -0.89
SMAD4-217ENST00000611848 MTRRQ9UBK8 725 aa9.46□□□□□ -0.89
SMAD4-217ENST00000611848 DPP7Q9UHL4 492 aa9.46□□□□□ -0.89
SMAD4-217ENST00000611848 SIX4Q9UIU6 781 aa9.46□□□□□ -0.89
SMAD4-217ENST00000611848 DSEQ9UL01 958 aa9.46□□□□□ -0.89
SMAD4-217ENST00000611848 BACE2Q9Y5Z0 518 aa9.46□□□□□ -0.89
SMAD4-217ENST00000611848 EPN1Q9Y6I3 576 aaPredicted RBP9.46□□□□□ -0.89
SMAD4-217ENST00000611848 PTPRJQ12913 1337 aa9.46□□□□□ -0.9
SMAD4-217ENST00000611848 NCOR1O75376 2440 aa9.46□□□□□ -0.9
SMAD4-217ENST00000611848 LRRIQ3A6PVS8 624 aaPredicted RBP9.45□□□□□ -0.9
SMAD4-217ENST00000611848 KPNA7A9QM74 516 aa9.45□□□□□ -0.9
SMAD4-217ENST00000611848 KIF5CO60282 957 aa9.45□□□□□ -0.9
SMAD4-217ENST00000611848 URI1O94763 535 aaPredicted RBP9.45□□□□□ -0.9
SMAD4-217ENST00000611848 ODC1P11926 461 aa9.45□□□□□ -0.9
SMAD4-217ENST00000611848 HNRNPH3P31942 346 aaKnown RBP9.45□□□□□ -0.9
SMAD4-217ENST00000611848 ARHGAP25P42331 645 aa9.45□□□□□ -0.9
SMAD4-217ENST00000611848 MARSP56192 900 aaKnown RBP9.45□□□□□ -0.9
SMAD4-217ENST00000611848 BFSP1Q12934 665 aa9.45□□□□□ -0.9
SMAD4-217ENST00000611848 MYO1EQ12965 1108 aa9.45□□□□□ -0.9
SMAD4-217ENST00000611848 TRPC3Q13507 836 aa9.45□□□□□ -0.9
SMAD4-217ENST00000611848 MAN2A1Q16706 1144 aa9.45□□□□□ -0.9
SMAD4-217ENST00000611848 AAK1Q2M2I8 961 aa9.45□□□□□ -0.9
SMAD4-217ENST00000611848 FKBP15Q5T1M5 1219 aa9.45□□□□□ -0.9
SMAD4-217ENST00000611848 ZNF280DQ6N043 979 aa9.45□□□□□ -0.9
SMAD4-217ENST00000611848 PRSS55Q6UWB4 352 aaPredicted RBP9.45□□□□□ -0.9
SMAD4-217ENST00000611848 ZNF662Q6ZS27 426 aa9.45□□□□□ -0.9
SMAD4-217ENST00000611848 EP400NLQ6ZTU2 488 aa9.45□□□□□ -0.9
SMAD4-217ENST00000611848 PLEKHO2Q8TD55 490 aa9.45□□□□□ -0.9
SMAD4-217ENST00000611848 EEF2KMTQ96G04 330 aa9.45□□□□□ -0.9
SMAD4-217ENST00000611848 BORCS6Q96GS4 357 aa9.45□□□□□ -0.9
SMAD4-217ENST00000611848 CHP1Q99653 195 aa9.45□□□□□ -0.9
SMAD4-217ENST00000611848 CLSTN3Q9BQT9 956 aa9.45□□□□□ -0.9
SMAD4-217ENST00000611848 NDST4Q9H3R1 872 aa9.45□□□□□ -0.9
SMAD4-217ENST00000611848 MYO1AQ9UBC5 1043 aa9.45□□□□□ -0.9
SMAD4-217ENST00000611848 SIK3Q9Y2K2 1263 aa9.45□□□□□ -0.9
SMAD4-217ENST00000611848 REXO2Q9Y3B8 237 aaKnown RBP9.45□□□□□ -0.9
SMAD4-217ENST00000611848 HCFC2Q9Y5Z7 792 aa9.45□□□□□ -0.9
SMAD4-217ENST00000611848 MRFAP1Q9Y605 127 aa9.45□□□□□ -0.9
SMAD4-217ENST00000611848 A0A0U1RQJ8 604 aa9.45□□□□□ -0.9
SMAD4-217ENST00000611848 PES1O00541 588 aaKnown RBP9.45□□□□□ -0.9
SMAD4-217ENST00000611848 CYB561D2O14569 222 aa9.45□□□□□ -0.9
SMAD4-217ENST00000611848 SPTLC1O15269 473 aa9.45□□□□□ -0.9
SMAD4-217ENST00000611848 LINC01565O15544 149 aa9.45□□□□□ -0.9
SMAD4-217ENST00000611848 TBC1D4O60343 1298 aa9.45□□□□□ -0.9
SMAD4-217ENST00000611848 PHACTR2O75167 634 aa9.45□□□□□ -0.9
SMAD4-217ENST00000611848 OAZ2O95190 189 aa9.45□□□□□ -0.9
SMAD4-217ENST00000611848 NDUFA10O95299 355 aa9.45□□□□□ -0.9
SMAD4-217ENST00000611848 STAU1O95793 577 aaKnown RBP9.45□□□□□ -0.9
SMAD4-217ENST00000611848 GLP2RO95838 553 aa9.45□□□□□ -0.9
SMAD4-217ENST00000611848 GLUD1P00367 558 aa9.45□□□□□ -0.9
SMAD4-217ENST00000611848 C4BPAP04003 597 aaKnown RBP9.45□□□□□ -0.9
SMAD4-217ENST00000611848 CYP11A1P05108 521 aa9.45□□□□□ -0.9
SMAD4-217ENST00000611848 HOXB8P17481 243 aaPredicted RBP9.45□□□□□ -0.9
SMAD4-217ENST00000611848 RPL17P18621 184 aaKnown RBP9.45□□□□□ -0.9
SMAD4-217ENST00000611848 TRIM21P19474 475 aaKnown RBP9.45□□□□□ -0.9
SMAD4-217ENST00000611848 ATICP31939 592 aa9.45□□□□□ -0.9
SMAD4-217ENST00000611848 LTBRP36941 435 aa9.45□□□□□ -0.9
SMAD4-217ENST00000611848 CLCN4P51793 760 aa9.45□□□□□ -0.9
SMAD4-217ENST00000611848 YWHAHQ04917 246 aaPredicted RBP9.45□□□□□ -0.9
SMAD4-217ENST00000611848 PDAP1Q13442 181 aaKnown RBP9.45□□□□□ -0.9
SMAD4-217ENST00000611848 BIRC3Q13489 604 aa9.45□□□□□ -0.9
SMAD4-217ENST00000611848 TUBB2AQ13885 445 aa9.45□□□□□ -0.9
SMAD4-217ENST00000611848 TSR1Q2NL82 804 aaKnown RBP9.45□□□□□ -0.9
SMAD4-217ENST00000611848 ELMSAN1Q6PJG2 1045 aa9.45□□□□□ -0.9
SMAD4-217ENST00000611848 LRRN4CLQ8ND94 238 aa9.45□□□□□ -0.9
SMAD4-217ENST00000611848 ACRBPQ8NEB7 543 aa9.45□□□□□ -0.9
SMAD4-217ENST00000611848 SPATA18Q8TC71 538 aa9.45□□□□□ -0.9
SMAD4-217ENST00000611848 SLC22A17Q8WUG5 538 aa9.45□□□□□ -0.9
SMAD4-217ENST00000611848 HDAC7Q8WUI4 952 aa9.45□□□□□ -0.9
SMAD4-217ENST00000611848 ATXN2LQ8WWM7 1075 aaKnown RBP9.45□□□□□ -0.9
SMAD4-217ENST00000611848 ATRIPQ8WXE1 791 aa9.45□□□□□ -0.9
SMAD4-217ENST00000611848 ZNF516Q92618 1163 aa9.45□□□□□ -0.9
SMAD4-217ENST00000611848 HPDLQ96IR7 371 aa9.45□□□□□ -0.9
SMAD4-217ENST00000611848 TUBB2BQ9BVA1 445 aa9.45□□□□□ -0.9
SMAD4-217ENST00000611848 METTL14Q9HCE5 456 aaKnown RBP9.45□□□□□ -0.9
SMAD4-217ENST00000611848 PRDM6Q9NQX0 595 aa9.45□□□□□ -0.9
SMAD4-217ENST00000611848 DZANK1Q9NVP4 752 aa9.45□□□□□ -0.9
SMAD4-217ENST00000611848 GDAP2Q9NXN4 497 aa9.45□□□□□ -0.9
SMAD4-217ENST00000611848 PRUNE2Q8WUY3 3088 aa9.44□□□□□ -0.9
SMAD4-217ENST00000611848 PLXNA3P51805 1871 aa9.44□□□□□ -0.9
SMAD4-217ENST00000611848 EFCAB8A8MWE9 144 aa9.44□□□□□ -0.9
SMAD4-217ENST00000611848 TADA3O75528 432 aa9.44□□□□□ -0.9
SMAD4-217ENST00000611848 GNA14O95837 355 aa9.44□□□□□ -0.9
SMAD4-217ENST00000611848 CST3P01034 146 aaPredicted RBP9.44□□□□□ -0.9
SMAD4-217ENST00000611848 KCNA5P22460 613 aa9.44□□□□□ -0.9
SMAD4-217ENST00000611848 GTF2H1P32780 548 aa9.44□□□□□ -0.9
SMAD4-217ENST00000611848 OR1D2P34982 312 aa9.44□□□□□ -0.9
SMAD4-217ENST00000611848 KLK7P49862 253 aa9.44□□□□□ -0.9
SMAD4-217ENST00000611848 DLG4P78352 724 aa9.44□□□□□ -0.9
SMAD4-217ENST00000611848 DLX2Q07687 328 aaPredicted RBP9.44□□□□□ -0.9
SMAD4-217ENST00000611848 RAB33AQ14088 237 aa9.44□□□□□ -0.9
SMAD4-217ENST00000611848 ELF2Q15723 593 aa9.44□□□□□ -0.9
SMAD4-217ENST00000611848 PUS10Q3MIT2 529 aaKnown RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms