RNA–Protein interactions for RNA: ENST00000609684.2

PCDHB16-201, Transcript of protocadherin beta 16, humanhuman

APPRIS P1 BASIC

Gene PCDHB16, Length 5,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-201ENST00000609684 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.91□□□□□ -0.02
PCDHB16-201ENST00000609684 APOBEC3HQ6NTF7 200 aaKnown RBP14.91□□□□□ -0.02
PCDHB16-201ENST00000609684 LVRNQ6Q4G3 990 aa14.91□□□□□ -0.02
PCDHB16-201ENST00000609684 NDFIP2Q9NV92 336 aa14.91□□□□□ -0.02
PCDHB16-201ENST00000609684 TRAF3IP3Q9Y228 551 aa14.91□□□□□ -0.02
PCDHB16-201ENST00000609684 MYOM1P52179 1685 aa14.91□□□□□ -0.02
PCDHB16-201ENST00000609684 TAF6P49848 677 aa14.91□□□□□ -0.02
PCDHB16-201ENST00000609684 USP10Q14694 798 aaKnown RBP14.91□□□□□ -0.02
PCDHB16-201ENST00000609684 AMHR2Q16671 573 aa14.91□□□□□ -0.02
PCDHB16-201ENST00000609684 MPZL3Q6UWV2 235 aa14.91□□□□□ -0.02
PCDHB16-201ENST00000609684 TRPM8Q7Z2W7 1104 aa14.91□□□□□ -0.02
PCDHB16-201ENST00000609684 RIBC1Q8N443 379 aaPredicted RBP14.91□□□□□ -0.02
PCDHB16-201ENST00000609684 CGRRF1Q99675 332 aa14.91□□□□□ -0.02
PCDHB16-201ENST00000609684 RGL2O15211 777 aa14.9□□□□□ -0.02
PCDHB16-201ENST00000609684 KCNT1Q5JUK3 1230 aa14.9□□□□□ -0.02
PCDHB16-201ENST00000609684 KLK14Q9P0G3 267 aa14.9□□□□□ -0.02
PCDHB16-201ENST00000609684 ZBBXA8MT70 800 aa14.9□□□□□ -0.02
PCDHB16-201ENST00000609684 SLITRK3O94933 977 aa14.9□□□□□ -0.02
PCDHB16-201ENST00000609684 CTCFP49711 727 aaPredicted RBP14.9□□□□□ -0.02
PCDHB16-201ENST00000609684 RARRES1P49788 294 aa14.9□□□□□ -0.02
PCDHB16-201ENST00000609684 UGP2Q16851 508 aa14.9□□□□□ -0.02
PCDHB16-201ENST00000609684 KCNK18Q7Z418 384 aa14.9□□□□□ -0.02
PCDHB16-201ENST00000609684 FBXO16Q8IX29 292 aaPredicted RBP14.9□□□□□ -0.02
PCDHB16-201ENST00000609684 ZNF507Q8TCN5 953 aa14.9□□□□□ -0.02
PCDHB16-201ENST00000609684 PTPRN2Q92932 1015 aa14.9□□□□□ -0.02
PCDHB16-201ENST00000609684 CENPKQ9BS16 269 aa14.9□□□□□ -0.02
PCDHB16-201ENST00000609684 A0A0A6YYK5 440 aaPredicted RBP14.9□□□□□ -0.02
PCDHB16-201ENST00000609684 EIF4E1BA6NMX2 242 aaKnown RBP14.9□□□□□ -0.02
PCDHB16-201ENST00000609684 NEMP1O14524 444 aa14.9□□□□□ -0.02
PCDHB16-201ENST00000609684 E2F6O75461 281 aa14.9□□□□□ -0.02
PCDHB16-201ENST00000609684 PYGBP11216 843 aa14.9□□□□□ -0.02
PCDHB16-201ENST00000609684 MYBPC2Q14324 1141 aa14.9□□□□□ -0.02
PCDHB16-201ENST00000609684 GNASQ5JWF2 1037 aa14.9□□□□□ -0.02
PCDHB16-201ENST00000609684 FAXCQ5TGI0 409 aa14.9□□□□□ -0.02
PCDHB16-201ENST00000609684 ELMSAN1Q6PJG2 1045 aa14.9□□□□□ -0.02
PCDHB16-201ENST00000609684 RAET1EQ8TD07 263 aa14.9□□□□□ -0.02
PCDHB16-201ENST00000609684 KRT35Q92764 455 aa14.9□□□□□ -0.02
PCDHB16-201ENST00000609684 FAM129AQ9BZQ8 928 aa14.9□□□□□ -0.02
PCDHB16-201ENST00000609684 UBQLN1Q9UMX0 589 aaKnown RBP14.9□□□□□ -0.02
PCDHB16-201ENST00000609684 RIC1Q4ADV7 1423 aa14.9□□□□□ -0.02
PCDHB16-201ENST00000609684 E2F8A0AVK6 867 aa14.9□□□□□ -0.02
PCDHB16-201ENST00000609684 GFAPP14136 432 aa14.9□□□□□ -0.02
PCDHB16-201ENST00000609684 NNMTP40261 264 aa14.9□□□□□ -0.02
PCDHB16-201ENST00000609684 PGM5Q15124 567 aa14.9□□□□□ -0.02
PCDHB16-201ENST00000609684 TMEM259Q4ZIN3 620 aa14.9□□□□□ -0.02
PCDHB16-201ENST00000609684 SH3RF1Q7Z6J0 888 aa14.9□□□□□ -0.02
PCDHB16-201ENST00000609684 FAM83AQ86UY5 434 aa14.9□□□□□ -0.02
PCDHB16-201ENST00000609684 FBXO25Q8TCJ0 367 aa14.9□□□□□ -0.02
PCDHB16-201ENST00000609684 EPS8L3Q8TE67 593 aaKnown RBP14.9□□□□□ -0.02
PCDHB16-201ENST00000609684 SNX19Q92543 992 aa14.9□□□□□ -0.02
PCDHB16-201ENST00000609684 ANKZF1Q9H8Y5 726 aa14.9□□□□□ -0.02
PCDHB16-201ENST00000609684 ANP32DO95626 131 aa14.89□□□□□ -0.03
PCDHB16-201ENST00000609684 NCAM1P13591 858 aa14.89□□□□□ -0.03
PCDHB16-201ENST00000609684 HIC1Q14526 733 aa14.89□□□□□ -0.03
PCDHB16-201ENST00000609684 ZBTB41Q5SVQ8 909 aa14.89□□□□□ -0.03
PCDHB16-201ENST00000609684 AP1ARQ63HQ0 302 aa14.89□□□□□ -0.03
PCDHB16-201ENST00000609684 OTOP1Q7RTM1 612 aa14.89□□□□□ -0.03
PCDHB16-201ENST00000609684 ZFPM1Q8IX07 1006 aa14.89□□□□□ -0.03
PCDHB16-201ENST00000609684 SERPINB12Q96P63 405 aa14.89□□□□□ -0.03
PCDHB16-201ENST00000609684 RNF103-CHMP3A0A140T963 221 aa14.89□□□□□ -0.03
PCDHB16-201ENST00000609684 KRT33BQ14525 404 aa14.89□□□□□ -0.03
PCDHB16-201ENST00000609684 DCAF4L1Q3SXM0 396 aa14.89□□□□□ -0.03
PCDHB16-201ENST00000609684 RABGAP1LQ5R372 815 aa14.89□□□□□ -0.03
PCDHB16-201ENST00000609684 AIPL1Q9NZN9 384 aa14.89□□□□□ -0.03
PCDHB16-201ENST00000609684 FAM8A1Q9UBU6 413 aa14.89□□□□□ -0.03
PCDHB16-201ENST00000609684 AFF4Q9UHB7 1163 aaKnown RBP14.89□□□□□ -0.03
PCDHB16-201ENST00000609684 PSMD3O43242 534 aa14.89□□□□□ -0.03
PCDHB16-201ENST00000609684 MAP3K6O95382 1288 aa14.89□□□□□ -0.03
PCDHB16-201ENST00000609684 FAM200BP0CF97 657 aa14.89□□□□□ -0.03
PCDHB16-201ENST00000609684 VEGFAP15692 232 aaPredicted RBP14.89□□□□□ -0.03
PCDHB16-201ENST00000609684 KRT4P19013 534 aa14.89□□□□□ -0.03
PCDHB16-201ENST00000609684 ANO4Q32M45 955 aa14.89□□□□□ -0.03
PCDHB16-201ENST00000609684 KDM7AQ6ZMT4 941 aa14.89□□□□□ -0.03
PCDHB16-201ENST00000609684 LRRN4CLQ8ND94 238 aa14.89□□□□□ -0.03
PCDHB16-201ENST00000609684 SLC35C1Q96A29 364 aa14.89□□□□□ -0.03
PCDHB16-201ENST00000609684 C20orf96Q9NUD7 363 aaPredicted RBP14.89□□□□□ -0.03
PCDHB16-201ENST00000609684 POLBP06746 335 aa14.89□□□□□ -0.03
PCDHB16-201ENST00000609684 VIL1P09327 827 aaKnown RBP14.89□□□□□ -0.03
PCDHB16-201ENST00000609684 PNPLA4P41247 253 aa14.89□□□□□ -0.03
PCDHB16-201ENST00000609684 COL9A3Q14050 684 aaPredicted RBP14.89□□□□□ -0.03
PCDHB16-201ENST00000609684 CAPRIN1Q14444 709 aaKnown RBP14.89□□□□□ -0.03
PCDHB16-201ENST00000609684 GRIK5Q16478 980 aa14.89□□□□□ -0.03
PCDHB16-201ENST00000609684 CXorf38Q8TB03 319 aa14.89□□□□□ -0.03
PCDHB16-201ENST00000609684 IDI2Q9BXS1 227 aa14.89□□□□□ -0.03
PCDHB16-201ENST00000609684 GLI1P08151 1106 aa14.88□□□□□ -0.03
PCDHB16-201ENST00000609684 SPRP35270 261 aaPredicted RBP14.88□□□□□ -0.03
PCDHB16-201ENST00000609684 GEMIN4P57678 1058 aaKnown RBP14.88□□□□□ -0.03
PCDHB16-201ENST00000609684 PCSK7Q16549 785 aa14.88□□□□□ -0.03
PCDHB16-201ENST00000609684 GLB1LQ6UWU2 654 aa14.88□□□□□ -0.03
PCDHB16-201ENST00000609684 ACOT1Q86TX2 421 aa14.88□□□□□ -0.03
PCDHB16-201ENST00000609684 ERO1BQ86YB8 467 aa14.88□□□□□ -0.03
PCDHB16-201ENST00000609684 LBHD1Q9BQE6 289 aaPredicted RBP14.88□□□□□ -0.03
PCDHB16-201ENST00000609684 TSPYL2Q9H2G4 693 aaPredicted RBP14.88□□□□□ -0.03
PCDHB16-201ENST00000609684 TASP1Q9H6P5 420 aa14.88□□□□□ -0.03
PCDHB16-201ENST00000609684 KCNQ5Q9NR82 932 aa14.88□□□□□ -0.03
PCDHB16-201ENST00000609684 ARHGEF38Q9NXL2 777 aa14.88□□□□□ -0.03
PCDHB16-201ENST00000609684 HNRNPCL1O60812 293 aaKnown RBP14.88□□□□□ -0.03
PCDHB16-201ENST00000609684 STIP1P31948 543 aaKnown RBP14.88□□□□□ -0.03
PCDHB16-201ENST00000609684 MYL6P60660 151 aa14.88□□□□□ -0.03
PCDHB16-201ENST00000609684 COBLL1Q53SF7 1204 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms