RNA–Protein interactions for RNA: ENST00000608532.1

HDDC2-207, Transcript of HD domain containing 2, humanhuman

TSL 3

Gene HDDC2, Length 553 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-207ENST00000608532 ACTRT3Q9BYD9 372 aa5.6□□□□□ -1.51
HDDC2-207ENST00000608532 TTYH3Q9C0H2 523 aa5.6□□□□□ -1.51
HDDC2-207ENST00000608532 KLK15Q9H2R5 256 aa5.6□□□□□ -1.51
HDDC2-207ENST00000608532 SLC12A5Q9H2X9 1139 aa5.6□□□□□ -1.51
HDDC2-207ENST00000608532 ALG13Q9NP73 1137 aaKnown RBP5.6□□□□□ -1.51
HDDC2-207ENST00000608532 NMRK2Q9NPI5 230 aa5.6□□□□□ -1.51
HDDC2-207ENST00000608532 CNNM1Q9NRU3 951 aa5.6□□□□□ -1.51
HDDC2-207ENST00000608532 SLC17A6Q9P2U8 582 aa5.6□□□□□ -1.51
HDDC2-207ENST00000608532 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.6□□□□□ -1.51
HDDC2-207ENST00000608532 SPATA31A3Q5VYP0 1347 aa5.59□□□□□ -1.51
HDDC2-207ENST00000608532 UNC5CO95185 931 aa5.59□□□□□ -1.51
HDDC2-207ENST00000608532 GRIA3P42263 894 aa5.59□□□□□ -1.51
HDDC2-207ENST00000608532 EPHB1P54762 984 aa5.59□□□□□ -1.51
HDDC2-207ENST00000608532 ELLP55199 621 aaPredicted RBP5.59□□□□□ -1.51
HDDC2-207ENST00000608532 NXPH1P58417 271 aa5.59□□□□□ -1.51
HDDC2-207ENST00000608532 BOP1Q14137 746 aaKnown RBP5.59□□□□□ -1.51
HDDC2-207ENST00000608532 PTPRRQ15256 657 aa5.59□□□□□ -1.51
HDDC2-207ENST00000608532 NBPF8Q3BBV2 869 aa5.59□□□□□ -1.51
HDDC2-207ENST00000608532 TSTD2Q5T7W7 516 aa5.59□□□□□ -1.51
HDDC2-207ENST00000608532 FAM160B1Q5W0V3 765 aa5.59□□□□□ -1.51
HDDC2-207ENST00000608532 KIAA0895LQ68EN5 471 aa5.59□□□□□ -1.51
HDDC2-207ENST00000608532 DENND1CQ8IV53 801 aa5.59□□□□□ -1.51
HDDC2-207ENST00000608532 PLBD2Q8NHP8 589 aa5.59□□□□□ -1.51
HDDC2-207ENST00000608532 PPP1R35Q8TAP8 253 aa5.59□□□□□ -1.51
HDDC2-207ENST00000608532 SLC46A1Q96NT5 459 aa5.59□□□□□ -1.51
HDDC2-207ENST00000608532 LRFN3Q9BTN0 628 aa5.59□□□□□ -1.51
HDDC2-207ENST00000608532 SPATA5L1Q9BVQ7 753 aa5.59□□□□□ -1.51
HDDC2-207ENST00000608532 CPNE5Q9HCH3 593 aa5.59□□□□□ -1.51
HDDC2-207ENST00000608532 NOB1Q9ULX3 412 aaKnown RBP5.59□□□□□ -1.51
HDDC2-207ENST00000608532 ADGRA2Q96PE1 1338 aa5.58□□□□□ -1.52
HDDC2-207ENST00000608532 CCDC151A5D8V7 595 aa5.58□□□□□ -1.52
HDDC2-207ENST00000608532 LINC00473A8K010 186 aa5.58□□□□□ -1.52
HDDC2-207ENST00000608532 VWC2LB2RUY7 222 aa5.58□□□□□ -1.52
HDDC2-207ENST00000608532 MASP2O00187 686 aa5.58□□□□□ -1.52
HDDC2-207ENST00000608532 SOAT2O75908 522 aa5.58□□□□□ -1.52
HDDC2-207ENST00000608532 IGLV2-14P01704 120 aa5.58□□□□□ -1.52
HDDC2-207ENST00000608532 NR2F6P10588 404 aa5.58□□□□□ -1.52
HDDC2-207ENST00000608532 PIM1P11309 404 aaPredicted RBP5.58□□□□□ -1.52
HDDC2-207ENST00000608532 HTR1BP28222 390 aa5.58□□□□□ -1.52
HDDC2-207ENST00000608532 TOB1P50616 345 aaPredicted RBP5.58□□□□□ -1.52
HDDC2-207ENST00000608532 EIF2B5Q13144 721 aaKnown RBP5.58□□□□□ -1.52
HDDC2-207ENST00000608532 LAYNQ6UX15 382 aa5.58□□□□□ -1.52
HDDC2-207ENST00000608532 TMEM108Q6UXF1 575 aa5.58□□□□□ -1.52
HDDC2-207ENST00000608532 PPP1R32Q7Z5V6 425 aa5.58□□□□□ -1.52
HDDC2-207ENST00000608532 GRASPQ7Z6J2 395 aaPredicted RBP5.58□□□□□ -1.52
HDDC2-207ENST00000608532 DAAM2Q86T65 1068 aa5.58□□□□□ -1.52
HDDC2-207ENST00000608532 RAVER1Q8IY67 606 aaKnown RBP5.58□□□□□ -1.52
HDDC2-207ENST00000608532 ZNF384Q8TF68 577 aa5.58□□□□□ -1.52
HDDC2-207ENST00000608532 FKBP10Q96AY3 582 aa5.58□□□□□ -1.52
HDDC2-207ENST00000608532 ZNF764Q96H86 408 aaPredicted RBP5.58□□□□□ -1.52
HDDC2-207ENST00000608532 AMBRA1Q9C0C7 1298 aa5.58□□□□□ -1.52
HDDC2-207ENST00000608532 CDH19Q9H159 772 aa5.58□□□□□ -1.52
HDDC2-207ENST00000608532 KLC4Q9NSK0 619 aa5.58□□□□□ -1.52
HDDC2-207ENST00000608532 GRPP07492 148 aa5.57□□□□□ -1.52
HDDC2-207ENST00000608532 PDHA1P08559 390 aa5.57□□□□□ -1.52
HDDC2-207ENST00000608532 IL12RB1P42701 662 aa5.57□□□□□ -1.52
HDDC2-207ENST00000608532 FGL2Q14314 439 aa5.57□□□□□ -1.52
HDDC2-207ENST00000608532 TBCCQ15814 346 aa5.57□□□□□ -1.52
HDDC2-207ENST00000608532 AMOTQ4VCS5 1084 aa5.57□□□□□ -1.52
HDDC2-207ENST00000608532 VPS53Q5VIR6 699 aa5.57□□□□□ -1.52
HDDC2-207ENST00000608532 NELL1Q92832 810 aa5.57□□□□□ -1.52
HDDC2-207ENST00000608532 FAM136AQ96C01 138 aa5.57□□□□□ -1.52
HDDC2-207ENST00000608532 AIFM3Q96NN9 605 aa5.57□□□□□ -1.52
HDDC2-207ENST00000608532 HAPLN3Q96S86 360 aa5.57□□□□□ -1.52
HDDC2-207ENST00000608532 OSBPL9Q96SU4 736 aa5.57□□□□□ -1.52
HDDC2-207ENST00000608532 ACO2Q99798 780 aaKnown RBP5.57□□□□□ -1.52
HDDC2-207ENST00000608532 ANLNQ9NQW6 1124 aa5.57□□□□□ -1.52
HDDC2-207ENST00000608532 SEMA4GQ9NTN9 838 aa5.57□□□□□ -1.52
HDDC2-207ENST00000608532 HESX1Q9UBX0 185 aa5.57□□□□□ -1.52
HDDC2-207ENST00000608532 THRAP3Q9Y2W1 955 aaKnown RBP5.57□□□□□ -1.52
HDDC2-207ENST00000608532 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.57□□□□□ -1.52
HDDC2-207ENST00000608532 COX11Q9Y6N1 276 aa5.57□□□□□ -1.52
HDDC2-207ENST00000608532 LRRC3CA6NJW4 275 aa5.56□□□□□ -1.52
HDDC2-207ENST00000608532 PPM1DO15297 605 aa5.56□□□□□ -1.52
HDDC2-207ENST00000608532 DNAJB5O75953 348 aa5.56□□□□□ -1.52
HDDC2-207ENST00000608532 UBXN7O94888 489 aa5.56□□□□□ -1.52
HDDC2-207ENST00000608532 TTLL1O95922 423 aa5.56□□□□□ -1.52
HDDC2-207ENST00000608532 S100BP04271 92 aaPredicted RBP5.56□□□□□ -1.52
HDDC2-207ENST00000608532 ELFN1P0C7U0 828 aa5.56□□□□□ -1.52
HDDC2-207ENST00000608532 CD38P28907 300 aa5.56□□□□□ -1.52
HDDC2-207ENST00000608532 ZNF134P52741 427 aa5.56□□□□□ -1.52
HDDC2-207ENST00000608532 RAB1AP62820 205 aa5.56□□□□□ -1.52
HDDC2-207ENST00000608532 MRPS21P82921 87 aaKnown RBP5.56□□□□□ -1.52
HDDC2-207ENST00000608532 TCF15Q12870 199 aa5.56□□□□□ -1.52
HDDC2-207ENST00000608532 PLEKHG6Q3KR16 790 aa5.56□□□□□ -1.52
HDDC2-207ENST00000608532 FAM153CQ494X1 144 aa5.56□□□□□ -1.52
HDDC2-207ENST00000608532 LONRF3Q496Y0 759 aa5.56□□□□□ -1.52
HDDC2-207ENST00000608532 FAM98AQ8NCA5 519 aaKnown RBP5.56□□□□□ -1.52
HDDC2-207ENST00000608532 ZBTB34Q8NCN2 500 aa5.56□□□□□ -1.52
HDDC2-207ENST00000608532 SLC35G2Q8TBE7 412 aa5.56□□□□□ -1.52
HDDC2-207ENST00000608532 UROC1Q96N76 676 aa5.56□□□□□ -1.52
HDDC2-207ENST00000608532 NT5C1BQ96P26 610 aa5.56□□□□□ -1.52
HDDC2-207ENST00000608532 P2RX7Q99572 595 aaKnown RBP5.56□□□□□ -1.52
HDDC2-207ENST00000608532 DKK3Q9UBP4 350 aa5.56□□□□□ -1.52
HDDC2-207ENST00000608532 POLR2AP24928 1970 aaKnown RBP5.55□□□□□ -1.52
HDDC2-207ENST00000608532 H3BML4 177 aa5.55□□□□□ -1.52
HDDC2-207ENST00000608532 URI1O94763 535 aaPredicted RBP5.55□□□□□ -1.52
HDDC2-207ENST00000608532 C1RP00736 705 aa5.55□□□□□ -1.52
HDDC2-207ENST00000608532 EBLN1P0CF75 366 aa5.55□□□□□ -1.52
HDDC2-207ENST00000608532 LILRA4P59901 499 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms