RNA–Protein interactions for RNA: ENST00000607959.5

USF2-216, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 5

Gene USF2, Length 1,920 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-216ENST00000607959 LLGL2Q6P1M3 1020 aa23.27■■□□□ 1.32
USF2-216ENST00000607959 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.27■■□□□ 1.32
USF2-216ENST00000607959 FAM43BQ6ZT52 329 aaPredicted RBP23.27■■□□□ 1.32
USF2-216ENST00000607959 UNC93AQ86WB7 457 aa23.27■■□□□ 1.32
USF2-216ENST00000607959 ADGRF2Q8IZF7 708 aa23.27■■□□□ 1.32
USF2-216ENST00000607959 OR6B3Q8NGW1 331 aa23.27■■□□□ 1.32
USF2-216ENST00000607959 PDCL3Q9H2J4 239 aa23.27■■□□□ 1.32
USF2-216ENST00000607959 WDR3Q9UNX4 943 aaKnown RBP eCLIP23.27■■□□□ 1.32
USF2-216ENST00000607959 TSC2P49815 1807 aa23.26■■□□□ 1.31
USF2-216ENST00000607959 I3L4J1 428 aa23.26■■□□□ 1.31
USF2-216ENST00000607959 HUS1O60921 280 aa23.26■■□□□ 1.31
USF2-216ENST00000607959 CYP1A2P05177 515 aa23.26■■□□□ 1.31
USF2-216ENST00000607959 WARSP23381 471 aaKnown RBP23.26■■□□□ 1.31
USF2-216ENST00000607959 GPC5P78333 572 aa23.26■■□□□ 1.31
USF2-216ENST00000607959 PAN2Q504Q3 1202 aaKnown RBP23.26■■□□□ 1.31
USF2-216ENST00000607959 DPH6Q7L8W6 267 aa23.26■■□□□ 1.31
USF2-216ENST00000607959 PHF13Q86YI8 300 aaPredicted RBP23.26■■□□□ 1.31
USF2-216ENST00000607959 COLGALT2Q8IYK4 626 aa23.26■■□□□ 1.31
USF2-216ENST00000607959 LRRC57Q8N9N7 239 aa23.26■■□□□ 1.31
USF2-216ENST00000607959 C1orf131Q8NDD1 294 aaKnown RBP23.26■■□□□ 1.31
USF2-216ENST00000607959 TRIM58Q8NG06 486 aa23.26■■□□□ 1.31
USF2-216ENST00000607959 TPCN2Q8NHX9 752 aa23.26■■□□□ 1.31
USF2-216ENST00000607959 STXBP5LQ9Y2K9 1186 aa23.26■■□□□ 1.31
USF2-216ENST00000607959 PCDHB7Q9Y5E2 793 aa23.26■■□□□ 1.31
USF2-216ENST00000607959 LTBP2Q14767 1821 aa23.26■■□□□ 1.31
USF2-216ENST00000607959 ENC1O14682 589 aa23.25■■□□□ 1.31
USF2-216ENST00000607959 GABRDO14764 452 aa23.25■■□□□ 1.31
USF2-216ENST00000607959 PALMO75781 387 aa23.25■■□□□ 1.31
USF2-216ENST00000607959 TIMP1P01033 207 aa23.25■■□□□ 1.31
USF2-216ENST00000607959 ATP1A1P05023 1023 aaKnown RBP23.25■■□□□ 1.31
USF2-216ENST00000607959 GNL1P36915 607 aaPredicted RBP23.25■■□□□ 1.31
USF2-216ENST00000607959 CNGA2Q16280 664 aa23.25■■□□□ 1.31
USF2-216ENST00000607959 DDX27Q96GQ7 796 aaKnown RBP23.25■■□□□ 1.31
USF2-216ENST00000607959 GOLPH3Q9H4A6 298 aa23.25■■□□□ 1.31
USF2-216ENST00000607959 HCSTQ9UBK5 93 aa23.25■■□□□ 1.31
USF2-216ENST00000607959 DNAJB4Q9UDY4 337 aa23.25■■□□□ 1.31
USF2-216ENST00000607959 GTF3C4Q9UKN8 822 aa23.25■■□□□ 1.31
USF2-216ENST00000607959 FNDC1Q4ZHG4 1894 aaPredicted RBP23.25■■□□□ 1.31
USF2-216ENST00000607959 MICAL2O94851 1124 aa23.25■■□□□ 1.31
USF2-216ENST00000607959 LSM8O95777 96 aaKnown RBP23.25■■□□□ 1.31
USF2-216ENST00000607959 PDGFRBP09619 1106 aa23.25■■□□□ 1.31
USF2-216ENST00000607959 CAPN2P17655 700 aa23.25■■□□□ 1.31
USF2-216ENST00000607959 BRCC3P46736 316 aa23.25■■□□□ 1.31
USF2-216ENST00000607959 CCDC142Q17RM4 750 aa23.25■■□□□ 1.31
USF2-216ENST00000607959 CRYBG2Q8N1P7 616 aa23.25■■□□□ 1.31
USF2-216ENST00000607959 ZNF653Q96CK0 615 aa23.25■■□□□ 1.31
USF2-216ENST00000607959 UROC1Q96N76 676 aa23.25■■□□□ 1.31
USF2-216ENST00000607959 LHX5Q9H2C1 402 aa23.25■■□□□ 1.31
USF2-216ENST00000607959 TIMM13Q9Y5L4 95 aaPredicted RBP23.25■■□□□ 1.31
USF2-216ENST00000607959 COL4A6Q14031 1691 aa23.25■■□□□ 1.31
USF2-216ENST00000607959 A8MXQ7 604 aa23.24■■□□□ 1.31
USF2-216ENST00000607959 B3GAT3O94766 335 aa23.24■■□□□ 1.31
USF2-216ENST00000607959 KIF4AO95239 1232 aa23.24■■□□□ 1.31
USF2-216ENST00000607959 NSFP46459 744 aaKnown RBP23.24■■□□□ 1.31
USF2-216ENST00000607959 AMPD2Q01433 879 aa23.24■■□□□ 1.31
USF2-216ENST00000607959 SGO2Q562F6 1265 aa23.24■■□□□ 1.31
USF2-216ENST00000607959 PPP1R26Q5T8A7 1209 aaPredicted RBP23.24■■□□□ 1.31
USF2-216ENST00000607959 KIAA0319Q5VV43 1072 aa23.24■■□□□ 1.31
USF2-216ENST00000607959 CNKSR3Q6P9H4 555 aa23.24■■□□□ 1.31
USF2-216ENST00000607959 HASPINQ8TF76 798 aa23.24■■□□□ 1.31
USF2-216ENST00000607959 NAPGQ99747 312 aaPredicted RBP23.24■■□□□ 1.31
USF2-216ENST00000607959 C11orf70Q9BRQ4 267 aa23.24■■□□□ 1.31
USF2-216ENST00000607959 PRDM5Q9NQX1 630 aaPredicted RBP23.24■■□□□ 1.31
USF2-216ENST00000607959 KIAA1257Q9ULG3 409 aa23.24■■□□□ 1.31
USF2-216ENST00000607959 CTAGE9A4FU28 777 aa23.23■■□□□ 1.31
USF2-216ENST00000607959 PFKMP08237 780 aa23.23■■□□□ 1.31
USF2-216ENST00000607959 FAM163BP0C2L3 166 aa23.23■■□□□ 1.31
USF2-216ENST00000607959 MMP8P22894 467 aa23.23■■□□□ 1.31
USF2-216ENST00000607959 RRM1P23921 792 aa23.23■■□□□ 1.31
USF2-216ENST00000607959 NOP2P46087 812 aaKnown RBP23.23■■□□□ 1.31
USF2-216ENST00000607959 NAP1L1P55209 391 aaKnown RBP23.23■■□□□ 1.31
USF2-216ENST00000607959 LCLAT1Q6UWP7 414 aa23.23■■□□□ 1.31
USF2-216ENST00000607959 MMS22LQ6ZRQ5 1243 aa23.23■■□□□ 1.31
USF2-216ENST00000607959 PHLDB2Q86SQ0 1253 aa23.23■■□□□ 1.31
USF2-216ENST00000607959 URGCPQ8TCY9 931 aa23.23■■□□□ 1.31
USF2-216ENST00000607959 MED7O43513 233 aa23.23■■□□□ 1.31
USF2-216ENST00000607959 CSF2RAP15509 400 aa23.23■■□□□ 1.31
USF2-216ENST00000607959 RFC2P35250 354 aa23.23■■□□□ 1.31
USF2-216ENST00000607959 HADHBP55084 474 aaKnown RBP23.23■■□□□ 1.31
USF2-216ENST00000607959 PKDCCQ504Y2 493 aa23.23■■□□□ 1.31
USF2-216ENST00000607959 DCLRE1AQ6PJP8 1040 aa23.23■■□□□ 1.31
USF2-216ENST00000607959 TMEM35BQ8NCS4 154 aa23.23■■□□□ 1.31
USF2-216ENST00000607959 SNX25Q9H3E2 840 aa23.23■■□□□ 1.31
USF2-216ENST00000607959 L2HGDHQ9H9P8 463 aa23.23■■□□□ 1.31
USF2-216ENST00000607959 FAM49BQ9NUQ9 324 aa23.23■■□□□ 1.31
USF2-216ENST00000607959 KANSL3Q9P2N6 904 aa23.23■■□□□ 1.31
USF2-216ENST00000607959 TJP2Q9UDY2 1190 aa23.23■■□□□ 1.31
USF2-216ENST00000607959 CNOT8Q9UFF9 292 aaKnown RBP23.23■■□□□ 1.31
USF2-216ENST00000607959 TSPAN16Q9UKR8 245 aa23.23■■□□□ 1.31
USF2-216ENST00000607959 M0QZQ0 153 aa23.22■■□□□ 1.31
USF2-216ENST00000607959 ATP2C2O75185 946 aa23.22■■□□□ 1.31
USF2-216ENST00000607959 MTA2O94776 668 aa23.22■■□□□ 1.31
USF2-216ENST00000607959 GPD2P43304 727 aa23.22■■□□□ 1.31
USF2-216ENST00000607959 SLFN11Q7Z7L1 901 aa23.22■■□□□ 1.31
USF2-216ENST00000607959 RTP3Q9BQQ7 232 aa23.22■■□□□ 1.31
USF2-216ENST00000607959 ZNF518BQ9C0D4 1074 aa23.22■■□□□ 1.31
USF2-216ENST00000607959 NRDE2Q9H7Z3 1164 aa23.22■■□□□ 1.31
USF2-216ENST00000607959 ADAM22Q9P0K1 906 aa23.22■■□□□ 1.31
USF2-216ENST00000607959 NCK2O43639 380 aa23.21■■□□□ 1.31
USF2-216ENST00000607959 BUB1BO60566 1050 aaPredicted RBP23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms