RNA–Protein interactions for RNA: ENST00000607482.5

CTSA-217, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 403 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-217ENST00000607482 TGFB1I1O43294 461 aa20.63■□□□□ 0.89
CTSA-217ENST00000607482 NPR3P17342 541 aa20.63■□□□□ 0.89
CTSA-217ENST00000607482 PCSK1P29120 753 aa20.63■□□□□ 0.89
CTSA-217ENST00000607482 CCR2P41597 374 aa20.63■□□□□ 0.89
CTSA-217ENST00000607482 NDUFA8P51970 172 aa20.63■□□□□ 0.89
CTSA-217ENST00000607482 KMT5BQ4FZB7 885 aa20.63■□□□□ 0.89
CTSA-217ENST00000607482 ADGRF2Q8IZF7 708 aa20.63■□□□□ 0.89
CTSA-217ENST00000607482 TOP6BLQ8N6T0 577 aa20.63■□□□□ 0.89
CTSA-217ENST00000607482 OR5B17Q8NGF7 314 aa20.63■□□□□ 0.89
CTSA-217ENST00000607482 ZSCAN18Q8TBC5 510 aaPredicted RBP20.63■□□□□ 0.89
CTSA-217ENST00000607482 PSMG2Q969U7 264 aa20.63■□□□□ 0.89
CTSA-217ENST00000607482 BORCS6Q96GS4 357 aa20.63■□□□□ 0.89
CTSA-217ENST00000607482 TRMT61BQ9BVS5 477 aaKnown RBP20.63■□□□□ 0.89
CTSA-217ENST00000607482 L1RE1Q9UN81 338 aa20.63■□□□□ 0.89
CTSA-217ENST00000607482 ZNF318Q5VUA4 2279 aa20.63■□□□□ 0.89
CTSA-217ENST00000607482 SCN1AP35498 2009 aa20.62■□□□□ 0.89
CTSA-217ENST00000607482 DPYSL4O14531 572 aa20.62■□□□□ 0.89
CTSA-217ENST00000607482 VNN2O95498 520 aa20.62■□□□□ 0.89
CTSA-217ENST00000607482 RPN1P04843 607 aaKnown RBP20.62■□□□□ 0.89
CTSA-217ENST00000607482 ACAT1P24752 427 aaKnown RBP20.62■□□□□ 0.89
CTSA-217ENST00000607482 CYP24A1Q07973 514 aa20.62■□□□□ 0.89
CTSA-217ENST00000607482 EHHADHQ08426 723 aa20.62■□□□□ 0.89
CTSA-217ENST00000607482 GRM2Q14416 872 aa20.62■□□□□ 0.89
CTSA-217ENST00000607482 BMT2Q1RMZ1 405 aa20.62■□□□□ 0.89
CTSA-217ENST00000607482 SLC44A4Q53GD3 710 aa20.62■□□□□ 0.89
CTSA-217ENST00000607482 CWF19L1Q69YN2 538 aaKnown RBP20.62■□□□□ 0.89
CTSA-217ENST00000607482 ALYREFQ86V81 257 aaKnown RBP20.62■□□□□ 0.89
CTSA-217ENST00000607482 SPATA2LQ8IUW3 424 aaPredicted RBP20.62■□□□□ 0.89
CTSA-217ENST00000607482 TTC9BQ8N6N2 239 aa20.62■□□□□ 0.89
CTSA-217ENST00000607482 GIPC2Q8TF65 315 aa20.62■□□□□ 0.89
CTSA-217ENST00000607482 ASB16Q96NS5 453 aa20.62■□□□□ 0.89
CTSA-217ENST00000607482 ACBD6Q9BR61 282 aa20.62■□□□□ 0.89
CTSA-217ENST00000607482 GDAP2Q9NXN4 497 aa20.62■□□□□ 0.89
CTSA-217ENST00000607482 TCHHQ07283 1943 aa20.61■□□□□ 0.89
CTSA-217ENST00000607482 PI15O43692 258 aa20.61■□□□□ 0.89
CTSA-217ENST00000607482 GABRR2P28476 465 aa20.61■□□□□ 0.89
CTSA-217ENST00000607482 EPHA5P54756 1037 aa20.61■□□□□ 0.89
CTSA-217ENST00000607482 TNNC1P63316 161 aa20.61■□□□□ 0.89
CTSA-217ENST00000607482 NUCB2P80303 420 aa20.61■□□□□ 0.89
CTSA-217ENST00000607482 PRKCQQ04759 706 aa20.61■□□□□ 0.89
CTSA-217ENST00000607482 TCF15Q12870 199 aa20.61■□□□□ 0.89
CTSA-217ENST00000607482 STK4Q13043 487 aa20.61■□□□□ 0.89
CTSA-217ENST00000607482 BIRC3Q13489 604 aa20.61■□□□□ 0.89
CTSA-217ENST00000607482 PSMD6Q15008 389 aa20.61■□□□□ 0.89
CTSA-217ENST00000607482 MLF2Q15773 248 aaPredicted RBP20.61■□□□□ 0.89
CTSA-217ENST00000607482 PHLDB3Q6NSJ2 640 aa20.61■□□□□ 0.89
CTSA-217ENST00000607482 TRAPPC11Q7Z392 1133 aa20.61■□□□□ 0.89
CTSA-217ENST00000607482 LRRTM3Q86VH5 581 aa20.61■□□□□ 0.89
CTSA-217ENST00000607482 SHKBP1Q8TBC3 707 aa20.61■□□□□ 0.89
CTSA-217ENST00000607482 E2F7Q96AV8 911 aa20.61■□□□□ 0.89
CTSA-217ENST00000607482 ZSWIM3Q96MP5 696 aa20.61■□□□□ 0.89
CTSA-217ENST00000607482 CGRRF1Q99675 332 aa20.61■□□□□ 0.89
CTSA-217ENST00000607482 LPIN3Q9BQK8 851 aa20.61■□□□□ 0.89
CTSA-217ENST00000607482 PI4K2AQ9BTU6 479 aa20.61■□□□□ 0.89
CTSA-217ENST00000607482 DNAJC25Q9H1X3 360 aa20.61■□□□□ 0.89
CTSA-217ENST00000607482 SNX25Q9H3E2 840 aa20.61■□□□□ 0.89
CTSA-217ENST00000607482 SIX4Q9UIU6 781 aa20.61■□□□□ 0.89
CTSA-217ENST00000607482 A0A1W2PQ27 194 aa20.6■□□□□ 0.89
CTSA-217ENST00000607482 A0A1W2PQ64 194 aa20.6■□□□□ 0.89
CTSA-217ENST00000607482 A0A1W2PQD8 194 aa20.6■□□□□ 0.89
CTSA-217ENST00000607482 HAPLN1P10915 354 aaPredicted RBP20.6■□□□□ 0.89
CTSA-217ENST00000607482 PSMC3P17980 439 aa20.6■□□□□ 0.89
CTSA-217ENST00000607482 CDC25CP30307 473 aa20.6■□□□□ 0.89
CTSA-217ENST00000607482 RPL10AP62906 217 aaKnown RBP20.6■□□□□ 0.89
CTSA-217ENST00000607482 UBXN2BQ14CS0 331 aa20.6■□□□□ 0.89
CTSA-217ENST00000607482 GPR158Q5T848 1215 aa20.6■□□□□ 0.89
CTSA-217ENST00000607482 DPH6Q7L8W6 267 aa20.6■□□□□ 0.89
CTSA-217ENST00000607482 DTWD2Q8NBA8 298 aa20.6■□□□□ 0.89
CTSA-217ENST00000607482 SPATA18Q8TC71 538 aa20.6■□□□□ 0.89
CTSA-217ENST00000607482 IRF7Q92985 503 aa20.6■□□□□ 0.89
CTSA-217ENST00000607482 PLA2G2FQ9BZM2 168 aa20.6■□□□□ 0.89
CTSA-217ENST00000607482 GDPD2Q9HCC8 539 aa20.6■□□□□ 0.89
CTSA-217ENST00000607482 FAM86C1Q9NVL1 165 aa20.6■□□□□ 0.89
CTSA-217ENST00000607482 MAGED2Q9UNF1 606 aaPredicted RBP20.6■□□□□ 0.89
CTSA-217ENST00000607482 HPSEQ9Y251 543 aa20.6■□□□□ 0.89
CTSA-217ENST00000607482 FRMD4BQ9Y2L6 1034 aa20.6■□□□□ 0.89
CTSA-217ENST00000607482 PTPRJQ12913 1337 aa20.59■□□□□ 0.89
CTSA-217ENST00000607482 ZNF263O14978 683 aa20.59■□□□□ 0.89
CTSA-217ENST00000607482 CALUO43852 315 aaPredicted RBP20.59■□□□□ 0.89
CTSA-217ENST00000607482 GDI1P31150 447 aa20.59■□□□□ 0.89
CTSA-217ENST00000607482 VIPR2P41587 438 aa20.59■□□□□ 0.89
CTSA-217ENST00000607482 MRE11P49959 708 aa20.59■□□□□ 0.89
CTSA-217ENST00000607482 INTS6LQ5JSJ4 861 aaKnown RBP20.59■□□□□ 0.89
CTSA-217ENST00000607482 C12orf56Q8IXR9 622 aa20.59■□□□□ 0.89
CTSA-217ENST00000607482 CCDC105Q8IYK2 499 aa20.59■□□□□ 0.89
CTSA-217ENST00000607482 DEPDC1BQ8WUY9 529 aa20.59■□□□□ 0.89
CTSA-217ENST00000607482 GTF3C4Q9UKN8 822 aa20.59■□□□□ 0.89
CTSA-217ENST00000607482 MRPS17Q9Y2R5 130 aaKnown RBP20.59■□□□□ 0.89
CTSA-217ENST00000607482 KMT2EQ8IZD2 1858 aa20.58■□□□□ 0.89
CTSA-217ENST00000607482 KANSL1LA0AUZ9 987 aa20.58■□□□□ 0.89
CTSA-217ENST00000607482 KLRC4O43908 158 aa20.58■□□□□ 0.89
CTSA-217ENST00000607482 DCNP07585 359 aaKnown RBP20.58■□□□□ 0.89
CTSA-217ENST00000607482 AP3M2P53677 418 aa20.58■□□□□ 0.89
CTSA-217ENST00000607482 MAPRE1Q15691 268 aaKnown RBP20.58■□□□□ 0.89
CTSA-217ENST00000607482 SOWAHAQ2M3V2 549 aa20.58■□□□□ 0.89
CTSA-217ENST00000607482 WDR72Q3MJ13 1102 aa20.58■□□□□ 0.89
CTSA-217ENST00000607482 CEP135Q66GS9 1140 aa20.58■□□□□ 0.89
CTSA-217ENST00000607482 ZNF852Q6ZMS4 543 aa20.58■□□□□ 0.89
CTSA-217ENST00000607482 KRBA2Q6ZNG9 492 aa20.58■□□□□ 0.89
CTSA-217ENST00000607482 C4orf50Q6ZRC1 276 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms