RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 MRPL47Q9HD33 250 aaKnown RBP22.91■■□□□ 1.26
USP6NL-204ENST00000606752 PDE2AO00408 941 aaPredicted RBP22.9■■□□□ 1.26
USP6NL-204ENST00000606752 KCNK3O14649 394 aa22.9■■□□□ 1.26
USP6NL-204ENST00000606752 HUS1O60921 280 aa22.9■■□□□ 1.26
USP6NL-204ENST00000606752 RPL9P32969 192 aaKnown RBP22.9■■□□□ 1.26
USP6NL-204ENST00000606752 STILQ15468 1287 aa22.9■■□□□ 1.26
USP6NL-204ENST00000606752 PTPROQ16827 1216 aa22.9■■□□□ 1.26
USP6NL-204ENST00000606752 PLEKHA7Q6IQ23 1121 aa22.9■■□□□ 1.26
USP6NL-204ENST00000606752 SLC24A5Q71RS6 500 aa22.9■■□□□ 1.26
USP6NL-204ENST00000606752 RTN4RL1Q86UN2 441 aaPredicted RBP22.9■■□□□ 1.26
USP6NL-204ENST00000606752 ERICH1Q86X53 443 aa22.9■■□□□ 1.26
USP6NL-204ENST00000606752 PBKQ96KB5 322 aa22.9■■□□□ 1.26
USP6NL-204ENST00000606752 C9IYK1 514 aa22.89■■□□□ 1.26
USP6NL-204ENST00000606752 MICAL2O94851 1124 aa22.89■■□□□ 1.26
USP6NL-204ENST00000606752 EOMESO95936 686 aa22.89■■□□□ 1.26
USP6NL-204ENST00000606752 FAM163BP0C2L3 166 aa22.89■■□□□ 1.26
USP6NL-204ENST00000606752 PAFAH1B1P43034 410 aa22.89■■□□□ 1.26
USP6NL-204ENST00000606752 CCDC181Q5TID7 509 aa22.89■■□□□ 1.26
USP6NL-204ENST00000606752 TOP6BLQ8N6T0 577 aa22.89■■□□□ 1.26
USP6NL-204ENST00000606752 KBTBD7Q8WVZ9 684 aa22.89■■□□□ 1.26
USP6NL-204ENST00000606752 FTHL17Q9BXU8 183 aa22.89■■□□□ 1.26
USP6NL-204ENST00000606752 CRISPLD2Q9H0B8 497 aa22.89■■□□□ 1.26
USP6NL-204ENST00000606752 PARVAQ9NVD7 372 aa22.89■■□□□ 1.26
USP6NL-204ENST00000606752 SCINQ9Y6U3 715 aa22.89■■□□□ 1.26
USP6NL-204ENST00000606752 PITPNM1O00562 1244 aa22.89■■□□□ 1.25
USP6NL-204ENST00000606752 IBSPP21815 317 aaPredicted RBP22.89■■□□□ 1.25
USP6NL-204ENST00000606752 GNL1P36915 607 aaPredicted RBP22.89■■□□□ 1.25
USP6NL-204ENST00000606752 MAMLD1Q13495 774 aa22.89■■□□□ 1.25
USP6NL-204ENST00000606752 ELF2Q15723 593 aa22.89■■□□□ 1.25
USP6NL-204ENST00000606752 LCLAT1Q6UWP7 414 aa22.89■■□□□ 1.25
USP6NL-204ENST00000606752 ZNF572Q7Z3I7 529 aaPredicted RBP22.89■■□□□ 1.25
USP6NL-204ENST00000606752 PHLDB2Q86SQ0 1253 aa22.89■■□□□ 1.25
USP6NL-204ENST00000606752 ANAPC7Q9UJX3 599 aa22.89■■□□□ 1.25
USP6NL-204ENST00000606752 L1RE1Q9UN81 338 aa22.89■■□□□ 1.25
USP6NL-204ENST00000606752 TMEM110-MUSTN1A8MSY1 372 aa22.88■■□□□ 1.25
USP6NL-204ENST00000606752 A8MXQ7 604 aa22.88■■□□□ 1.25
USP6NL-204ENST00000606752 PODXLO00592 558 aa22.88■■□□□ 1.25
USP6NL-204ENST00000606752 COMTP21964 271 aa22.88■■□□□ 1.25
USP6NL-204ENST00000606752 C1QTNF8P60827 252 aa22.88■■□□□ 1.25
USP6NL-204ENST00000606752 FAM189BP81408 668 aa22.88■■□□□ 1.25
USP6NL-204ENST00000606752 CFAP221Q4G0U5 840 aa22.88■■□□□ 1.25
USP6NL-204ENST00000606752 TEX35Q5T0J7 233 aa22.88■■□□□ 1.25
USP6NL-204ENST00000606752 LLGL2Q6P1M3 1020 aa22.88■■□□□ 1.25
USP6NL-204ENST00000606752 ACOT1Q86TX2 421 aa22.88■■□□□ 1.25
USP6NL-204ENST00000606752 BTBD6Q96KE9 485 aa22.88■■□□□ 1.25
USP6NL-204ENST00000606752 SELENOOQ9BVL4 669 aa22.88■■□□□ 1.25
USP6NL-204ENST00000606752 DNAI2Q9GZS0 605 aa22.88■■□□□ 1.25
USP6NL-204ENST00000606752 SNX25Q9H3E2 840 aa22.88■■□□□ 1.25
USP6NL-204ENST00000606752 NME7Q9Y5B8 376 aa22.88■■□□□ 1.25
USP6NL-204ENST00000606752 MIF4GDA9UHW6 222 aaKnown RBP22.87■■□□□ 1.25
USP6NL-204ENST00000606752 MYO1FO00160 1098 aa22.87■■□□□ 1.25
USP6NL-204ENST00000606752 PQBP1O60828 265 aaKnown RBP22.87■■□□□ 1.25
USP6NL-204ENST00000606752 CLCNKBP51801 687 aa22.87■■□□□ 1.25
USP6NL-204ENST00000606752 CTU1Q7Z7A3 348 aaKnown RBP22.87■■□□□ 1.25
USP6NL-204ENST00000606752 CRYBG2Q8N1P7 616 aa22.87■■□□□ 1.25
USP6NL-204ENST00000606752 DNAJC5GQ8N7S2 189 aa22.87■■□□□ 1.25
USP6NL-204ENST00000606752 C12orf29Q8N999 325 aa22.87■■□□□ 1.25
USP6NL-204ENST00000606752 RABGGTAQ92696 567 aa22.87■■□□□ 1.25
USP6NL-204ENST00000606752 STRIP2Q9ULQ0 834 aa22.87■■□□□ 1.25
USP6NL-204ENST00000606752 M0QYV0 167 aa22.87■■□□□ 1.25
USP6NL-204ENST00000606752 CYB561D2O14569 222 aa22.87■■□□□ 1.25
USP6NL-204ENST00000606752 INPPL1O15357 1258 aa22.87■■□□□ 1.25
USP6NL-204ENST00000606752 DDX3YO15523 660 aaKnown RBP22.87■■□□□ 1.25
USP6NL-204ENST00000606752 POMCP01189 267 aa22.87■■□□□ 1.25
USP6NL-204ENST00000606752 FGFR1P11362 822 aa22.87■■□□□ 1.25
USP6NL-204ENST00000606752 GPD2P43304 727 aa22.87■■□□□ 1.25
USP6NL-204ENST00000606752 ITIH3Q06033 890 aa22.87■■□□□ 1.25
USP6NL-204ENST00000606752 GRIK3Q13003 919 aa22.87■■□□□ 1.25
USP6NL-204ENST00000606752 SLC39A5Q6ZMH5 540 aa22.87■■□□□ 1.25
USP6NL-204ENST00000606752 FAM43BQ6ZT52 329 aaPredicted RBP22.87■■□□□ 1.25
USP6NL-204ENST00000606752 ADGRF2Q8IZF7 708 aa22.87■■□□□ 1.25
USP6NL-204ENST00000606752 LINC01599Q8WXQ3 324 aa22.87■■□□□ 1.25
USP6NL-204ENST00000606752 DDX27Q96GQ7 796 aaKnown RBP22.87■■□□□ 1.25
USP6NL-204ENST00000606752 MS4A14Q96JA4 679 aa22.87■■□□□ 1.25
USP6NL-204ENST00000606752 CYTH4Q9UIA0 394 aa22.87■■□□□ 1.25
USP6NL-204ENST00000606752 TSPAN16Q9UKR8 245 aa22.87■■□□□ 1.25
USP6NL-204ENST00000606752 NBNO60934 754 aa22.86■■□□□ 1.25
USP6NL-204ENST00000606752 WARSP23381 471 aaKnown RBP22.86■■□□□ 1.25
USP6NL-204ENST00000606752 MNX1P50219 401 aaPredicted RBP22.86■■□□□ 1.25
USP6NL-204ENST00000606752 GPNMBQ14956 572 aa22.86■■□□□ 1.25
USP6NL-204ENST00000606752 UPP1Q16831 310 aa22.86■■□□□ 1.25
USP6NL-204ENST00000606752 ANKRD33Q7Z3H0 272 aa22.86■■□□□ 1.25
USP6NL-204ENST00000606752 PDCL2Q8N4E4 241 aa22.86■■□□□ 1.25
USP6NL-204ENST00000606752 MSANTD4Q8NCY6 345 aa22.86■■□□□ 1.25
USP6NL-204ENST00000606752 ZNF333Q96JL9 665 aa22.86■■□□□ 1.25
USP6NL-204ENST00000606752 WNT8AQ9H1J5 351 aa22.86■■□□□ 1.25
USP6NL-204ENST00000606752 CACNG4Q9UBN1 327 aa22.86■■□□□ 1.25
USP6NL-204ENST00000606752 TCRBV5S1A1TA0A578 114 aa22.85■■□□□ 1.25
USP6NL-204ENST00000606752 CASTOR2A6NHX0 329 aa22.85■■□□□ 1.25
USP6NL-204ENST00000606752 PDGFRBP09619 1106 aa22.85■■□□□ 1.25
USP6NL-204ENST00000606752 LMO2P25791 158 aa22.85■■□□□ 1.25
USP6NL-204ENST00000606752 ATN1P54259 1190 aaPredicted RBP22.85■■□□□ 1.25
USP6NL-204ENST00000606752 PTPN20Q4JDL3 420 aa22.85■■□□□ 1.25
USP6NL-204ENST00000606752 PLEKHG4Q58EX7 1191 aa22.85■■□□□ 1.25
USP6NL-204ENST00000606752 PPP1R26Q5T8A7 1209 aaPredicted RBP22.85■■□□□ 1.25
USP6NL-204ENST00000606752 FBXO46Q6PJ61 603 aaPredicted RBP22.85■■□□□ 1.25
USP6NL-204ENST00000606752 FEZF2Q8TBJ5 459 aa22.85■■□□□ 1.25
USP6NL-204ENST00000606752 C18orf8Q96DM3 657 aa22.85■■□□□ 1.25
USP6NL-204ENST00000606752 SENP8Q96LD8 212 aa22.85■■□□□ 1.25
USP6NL-204ENST00000606752 INPP5FQ9Y2H2 1132 aa22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms