RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 ARHGAP15Q53QZ3 475 aa8.21□□□□□ -1.1
CUX1-219ENST00000606749 TSSK4Q6SA08 328 aa8.21□□□□□ -1.1
CUX1-219ENST00000606749 BRSK2Q8IWQ3 736 aa8.21□□□□□ -1.1
CUX1-219ENST00000606749 CCDC65Q8IXS2 484 aa8.21□□□□□ -1.1
CUX1-219ENST00000606749 YAF2Q8IY57 180 aa8.21□□□□□ -1.1
CUX1-219ENST00000606749 KIAA2013Q8IYS2 634 aa8.21□□□□□ -1.1
CUX1-219ENST00000606749 DCP1BQ8IZD4 617 aaKnown RBP8.21□□□□□ -1.1
CUX1-219ENST00000606749 PDCL2Q8N4E4 241 aa8.21□□□□□ -1.1
CUX1-219ENST00000606749 DCLK2Q8N568 766 aa8.21□□□□□ -1.1
CUX1-219ENST00000606749 C1orf127Q8N9H9 656 aa8.21□□□□□ -1.1
CUX1-219ENST00000606749 ZBTB44Q8NCP5 570 aa8.21□□□□□ -1.1
CUX1-219ENST00000606749 SPPL2BQ8TCT7 592 aa8.21□□□□□ -1.1
CUX1-219ENST00000606749 CSGALNACT1Q8TDX6 532 aa8.21□□□□□ -1.1
CUX1-219ENST00000606749 RUBCNQ92622 972 aa8.21□□□□□ -1.1
CUX1-219ENST00000606749 ZNF560Q96MR9 790 aa8.21□□□□□ -1.1
CUX1-219ENST00000606749 CBWD1Q9BRT8 395 aa8.21□□□□□ -1.1
CUX1-219ENST00000606749 SLC46A2Q9BY10 475 aa8.21□□□□□ -1.1
CUX1-219ENST00000606749 CHRDQ9H2X0 955 aa8.21□□□□□ -1.1
CUX1-219ENST00000606749 PCIF1Q9H4Z3 704 aa8.21□□□□□ -1.1
CUX1-219ENST00000606749 TASP1Q9H6P5 420 aa8.21□□□□□ -1.1
CUX1-219ENST00000606749 C8orf33Q9H7E9 229 aaPredicted RBP8.21□□□□□ -1.1
CUX1-219ENST00000606749 TMEM206Q9H813 350 aa8.21□□□□□ -1.1
CUX1-219ENST00000606749 PDE11AQ9HCR9 933 aa8.21□□□□□ -1.1
CUX1-219ENST00000606749 PRMT8Q9NR22 394 aaPredicted RBP8.21□□□□□ -1.1
CUX1-219ENST00000606749 TMLHEQ9NVH6 421 aa8.21□□□□□ -1.1
CUX1-219ENST00000606749 KBTBD4Q9NVX7 518 aa8.21□□□□□ -1.1
CUX1-219ENST00000606749 OBP2AQ9NY56 170 aa8.21□□□□□ -1.1
CUX1-219ENST00000606749 ABI2Q9NYB9 513 aaPredicted RBP8.21□□□□□ -1.1
CUX1-219ENST00000606749 RBAKQ9NYW8 714 aaPredicted RBP8.21□□□□□ -1.1
CUX1-219ENST00000606749 AGAP1Q9UPQ3 857 aa8.21□□□□□ -1.1
CUX1-219ENST00000606749 PCDHGA2Q9Y5H1 932 aa8.21□□□□□ -1.1
CUX1-219ENST00000606749 FAM186AA6NE01 2351 aa8.21□□□□□ -1.1
CUX1-219ENST00000606749 DCHS1Q96JQ0 3298 aa8.21□□□□□ -1.1
CUX1-219ENST00000606749 FANCMQ8IYD8 2048 aa8.2□□□□□ -1.1
CUX1-219ENST00000606749 MYBPHLA2RUH7 354 aa8.2□□□□□ -1.1
CUX1-219ENST00000606749 PPP6R2O75170 966 aa8.2□□□□□ -1.1
CUX1-219ENST00000606749 F11P03951 625 aa8.2□□□□□ -1.1
CUX1-219ENST00000606749 TDGF1P13385 188 aa8.2□□□□□ -1.1
CUX1-219ENST00000606749 HMGA1P17096 107 aaKnown RBP8.2□□□□□ -1.1
CUX1-219ENST00000606749 CDC25CP30307 473 aa8.2□□□□□ -1.1
CUX1-219ENST00000606749 HOXD13P35453 343 aa8.2□□□□□ -1.1
CUX1-219ENST00000606749 KPNA1P52294 538 aaPredicted RBP8.2□□□□□ -1.1
CUX1-219ENST00000606749 RBP5P82980 135 aa8.2□□□□□ -1.1
CUX1-219ENST00000606749 CYP4F8P98187 520 aa8.2□□□□□ -1.1
CUX1-219ENST00000606749 FOXK2Q01167 660 aa8.2□□□□□ -1.1
CUX1-219ENST00000606749 TSPY1Q01534 308 aa8.2□□□□□ -1.1
CUX1-219ENST00000606749 STK38Q15208 465 aa8.2□□□□□ -1.1
CUX1-219ENST00000606749 E2F4Q16254 413 aa8.2□□□□□ -1.1
CUX1-219ENST00000606749 TAF12Q16514 161 aa8.2□□□□□ -1.1
CUX1-219ENST00000606749 ARHGAP29Q52LW3 1261 aa8.2□□□□□ -1.1
CUX1-219ENST00000606749 C1orf228Q6PIY5 440 aa8.2□□□□□ -1.1
CUX1-219ENST00000606749 TMEM150AQ86TG1 271 aa8.2□□□□□ -1.1
CUX1-219ENST00000606749 TMEM86AQ8N2M4 240 aa8.2□□□□□ -1.1
CUX1-219ENST00000606749 GPD1LQ8N335 351 aa8.2□□□□□ -1.1
CUX1-219ENST00000606749 LRRC52Q8N7C0 313 aa8.2□□□□□ -1.1
CUX1-219ENST00000606749 GLIS3Q8NEA6 775 aa8.2□□□□□ -1.1
CUX1-219ENST00000606749 BPIFB1Q8TDL5 484 aa8.2□□□□□ -1.1
CUX1-219ENST00000606749 HPS3Q969F9 1004 aa8.2□□□□□ -1.1
CUX1-219ENST00000606749 MSANTD3Q96H12 275 aa8.2□□□□□ -1.1
CUX1-219ENST00000606749 ZFYVE19Q96K21 471 aa8.2□□□□□ -1.1
CUX1-219ENST00000606749 FAM84AQ96KN4 292 aa8.2□□□□□ -1.1
CUX1-219ENST00000606749 ZNF396Q96N95 335 aaPredicted RBP8.2□□□□□ -1.1
CUX1-219ENST00000606749 HINFPQ9BQA5 517 aa8.2□□□□□ -1.1
CUX1-219ENST00000606749 ACBD6Q9BR61 282 aa8.2□□□□□ -1.1
CUX1-219ENST00000606749 IER2Q9BTL4 223 aa8.2□□□□□ -1.1
CUX1-219ENST00000606749 PI4K2AQ9BTU6 479 aa8.2□□□□□ -1.1
CUX1-219ENST00000606749 FAM126AQ9BYI3 521 aaPredicted RBP8.2□□□□□ -1.1
CUX1-219ENST00000606749 LRRC27Q9C0I9 530 aa8.2□□□□□ -1.1
CUX1-219ENST00000606749 TNMDQ9H2S6 317 aa8.2□□□□□ -1.1
CUX1-219ENST00000606749 GDAP2Q9NXN4 497 aa8.2□□□□□ -1.1
CUX1-219ENST00000606749 DDX43Q9NXZ2 648 aaKnown RBP8.2□□□□□ -1.1
CUX1-219ENST00000606749 GTSE1Q9NYZ3 720 aa8.2□□□□□ -1.1
CUX1-219ENST00000606749 SIX4Q9UIU6 781 aa8.2□□□□□ -1.1
CUX1-219ENST00000606749 ITGA11Q9UKX5 1188 aa8.2□□□□□ -1.1
CUX1-219ENST00000606749 L1RE1Q9UN81 338 aa8.2□□□□□ -1.1
CUX1-219ENST00000606749 PCDHB5Q9Y5E4 795 aa8.2□□□□□ -1.1
CUX1-219ENST00000606749 ZNF233A6NK53 670 aa8.19□□□□□ -1.1
CUX1-219ENST00000606749 SLC38A8A6NNN8 435 aa8.19□□□□□ -1.1
CUX1-219ENST00000606749 SPECC1L-ADORA2AF8WAN1 911 aa8.19□□□□□ -1.1
CUX1-219ENST00000606749 GABRDO14764 452 aa8.19□□□□□ -1.1
CUX1-219ENST00000606749 KIAA0391O15091 583 aaKnown RBP8.19□□□□□ -1.1
CUX1-219ENST00000606749 CUTAO60888 179 aa8.19□□□□□ -1.1
CUX1-219ENST00000606749 HUS1O60921 280 aa8.19□□□□□ -1.1
CUX1-219ENST00000606749 PRPF40AO75400 957 aaKnown RBP8.19□□□□□ -1.1
CUX1-219ENST00000606749 PRAMEF12O95522 483 aa8.19□□□□□ -1.1
CUX1-219ENST00000606749 YEATS4O95619 227 aa8.19□□□□□ -1.1
CUX1-219ENST00000606749 KRT19P08727 400 aa8.19□□□□□ -1.1
CUX1-219ENST00000606749 CSH1P0DML2 217 aa8.19□□□□□ -1.1
CUX1-219ENST00000606749 CSH2P0DML3 217 aa8.19□□□□□ -1.1
CUX1-219ENST00000606749 ACAT1P24752 427 aaKnown RBP8.19□□□□□ -1.1
CUX1-219ENST00000606749 CYP2F1P24903 491 aa8.19□□□□□ -1.1
CUX1-219ENST00000606749 CTHP32929 405 aa8.19□□□□□ -1.1
CUX1-219ENST00000606749 SOX9P48436 509 aa8.19□□□□□ -1.1
CUX1-219ENST00000606749 LHX1P48742 406 aa8.19□□□□□ -1.1
CUX1-219ENST00000606749 GPR15P49685 360 aa8.19□□□□□ -1.1
CUX1-219ENST00000606749 NRLP54845 237 aa8.19□□□□□ -1.1
CUX1-219ENST00000606749 NLRP12P59046 1061 aa8.19□□□□□ -1.1
CUX1-219ENST00000606749 AMPD3Q01432 767 aa8.19□□□□□ -1.1
CUX1-219ENST00000606749 BFSP1Q12934 665 aa8.19□□□□□ -1.1
CUX1-219ENST00000606749 GAS6Q14393 721 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms