RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 DSG1Q02413 1049 aa8.2□□□□□ -1.1
MSH6-211ENST00000606499 UBE3AQ05086 875 aa8.2□□□□□ -1.1
MSH6-211ENST00000606499 GOLGA8FQ08AF8 430 aa8.2□□□□□ -1.1
MSH6-211ENST00000606499 GOLGA8DPQ0D2H9 430 aa8.2□□□□□ -1.1
MSH6-211ENST00000606499 MRPL58Q14197 206 aaKnown RBP8.2□□□□□ -1.1
MSH6-211ENST00000606499 DRAP1Q14919 205 aaPredicted RBP8.2□□□□□ -1.1
MSH6-211ENST00000606499 CTXN3Q4LDR2 81 aa8.2□□□□□ -1.1
MSH6-211ENST00000606499 ZNF280DQ6N043 979 aa8.2□□□□□ -1.1
MSH6-211ENST00000606499 TMEM270Q6UE05 265 aa8.2□□□□□ -1.1
MSH6-211ENST00000606499 ANKS3Q6ZW76 656 aa8.2□□□□□ -1.1
MSH6-211ENST00000606499 ENOSF1Q7L5Y1 443 aa8.2□□□□□ -1.1
MSH6-211ENST00000606499 CACNA2D4Q7Z3S7 1137 aa8.2□□□□□ -1.1
MSH6-211ENST00000606499 ACOT1Q86TX2 421 aa8.2□□□□□ -1.1
MSH6-211ENST00000606499 RBBP8NLQ8NC74 664 aaPredicted RBP8.2□□□□□ -1.1
MSH6-211ENST00000606499 WHAMMQ8TF30 809 aa8.2□□□□□ -1.1
MSH6-211ENST00000606499 CPLX3Q8WVH0 158 aa8.2□□□□□ -1.1
MSH6-211ENST00000606499 SHC3Q92529 594 aa8.2□□□□□ -1.1
MSH6-211ENST00000606499 BAP1Q92560 729 aa8.2□□□□□ -1.1
MSH6-211ENST00000606499 FAXDC2Q96IV6 333 aa8.2□□□□□ -1.1
MSH6-211ENST00000606499 FAM161BQ96MY7 647 aa8.2□□□□□ -1.1
MSH6-211ENST00000606499 SYT15Q9BQS2 421 aa8.2□□□□□ -1.1
MSH6-211ENST00000606499 ELOVL4Q9GZR5 314 aa8.2□□□□□ -1.1
MSH6-211ENST00000606499 PRDM12Q9H4Q4 367 aa8.2□□□□□ -1.1
MSH6-211ENST00000606499 MRPL17Q9NRX2 175 aaKnown RBP8.2□□□□□ -1.1
MSH6-211ENST00000606499 MTRRQ9UBK8 725 aa8.2□□□□□ -1.1
MSH6-211ENST00000606499 STK39Q9UEW8 545 aa8.2□□□□□ -1.1
MSH6-211ENST00000606499 PUF60Q9UHX1 559 aaKnown RBP8.2□□□□□ -1.1
MSH6-211ENST00000606499 FBXL5Q9UKA1 691 aa8.2□□□□□ -1.1
MSH6-211ENST00000606499 BARX2Q9UMQ3 279 aaPredicted RBP8.2□□□□□ -1.1
MSH6-211ENST00000606499 STXBP5LQ9Y2K9 1186 aa8.2□□□□□ -1.1
MSH6-211ENST00000606499 PCDHB4Q9Y5E5 795 aa8.2□□□□□ -1.1
MSH6-211ENST00000606499 CDY1Q9Y6F8 540 aa8.2□□□□□ -1.1
MSH6-211ENST00000606499 TMEM265A0A087WTH1 108 aa8.19□□□□□ -1.1
MSH6-211ENST00000606499 C2orf71A6NGG8 1288 aa8.19□□□□□ -1.1
MSH6-211ENST00000606499 LRRC53A6NM62 1247 aa8.19□□□□□ -1.1
MSH6-211ENST00000606499 FOXN3O00409 490 aaPredicted RBP8.19□□□□□ -1.1
MSH6-211ENST00000606499 FSCN2O14926 492 aa8.19□□□□□ -1.1
MSH6-211ENST00000606499 TBC1D4O60343 1298 aa8.19□□□□□ -1.1
MSH6-211ENST00000606499 LILRB3O75022 631 aa8.19□□□□□ -1.1
MSH6-211ENST00000606499 GFPT2O94808 682 aa8.19□□□□□ -1.1
MSH6-211ENST00000606499 CXCL14O95715 111 aa8.19□□□□□ -1.1
MSH6-211ENST00000606499 CNPP09543 421 aaKnown RBP8.19□□□□□ -1.1
MSH6-211ENST00000606499 CPB1P15086 417 aa8.19□□□□□ -1.1
MSH6-211ENST00000606499 CASP14P31944 242 aa8.19□□□□□ -1.1
MSH6-211ENST00000606499 OR1D2P34982 312 aa8.19□□□□□ -1.1
MSH6-211ENST00000606499 GNL1P36915 607 aaPredicted RBP8.19□□□□□ -1.1
MSH6-211ENST00000606499 LHX1P48742 406 aa8.19□□□□□ -1.1
MSH6-211ENST00000606499 ZNF132P52740 706 aa8.19□□□□□ -1.1
MSH6-211ENST00000606499 RAD23BP54727 409 aa8.19□□□□□ -1.1
MSH6-211ENST00000606499 ARPP19P56211 112 aa8.19□□□□□ -1.1
MSH6-211ENST00000606499 YWHAEP62258 255 aaKnown RBP8.19□□□□□ -1.1
MSH6-211ENST00000606499 TBX2Q13207 712 aaPredicted RBP8.19□□□□□ -1.1
MSH6-211ENST00000606499 SMC1AQ14683 1233 aaKnown RBP8.19□□□□□ -1.1
MSH6-211ENST00000606499 GRIN2CQ14957 1233 aa8.19□□□□□ -1.1
MSH6-211ENST00000606499 SLC39A12Q504Y0 691 aa8.19□□□□□ -1.1
MSH6-211ENST00000606499 FIGNQ5HY92 759 aa8.19□□□□□ -1.1
MSH6-211ENST00000606499 MDH1BQ5I0G3 518 aa8.19□□□□□ -1.1
MSH6-211ENST00000606499 HABP4Q5JVS0 413 aaKnown RBP8.19□□□□□ -1.1
MSH6-211ENST00000606499 E4F1Q66K89 784 aaPredicted RBP8.19□□□□□ -1.1
MSH6-211ENST00000606499 THEM5Q8N1Q8 247 aa8.19□□□□□ -1.1
MSH6-211ENST00000606499 C12orf29Q8N999 325 aa8.19□□□□□ -1.1
MSH6-211ENST00000606499 SLC4A11Q8NBS3 891 aa8.19□□□□□ -1.1
MSH6-211ENST00000606499 SPC24Q8NBT2 197 aa8.19□□□□□ -1.1
MSH6-211ENST00000606499 B3GALNT2Q8NCR0 500 aa8.19□□□□□ -1.1
MSH6-211ENST00000606499 SPATA18Q8TC71 538 aa8.19□□□□□ -1.1
MSH6-211ENST00000606499 JAKMIP2Q96AA8 810 aa8.19□□□□□ -1.1
MSH6-211ENST00000606499 FAM81BQ96LP2 452 aa8.19□□□□□ -1.1
MSH6-211ENST00000606499 SPAG5Q96R06 1193 aa8.19□□□□□ -1.1
MSH6-211ENST00000606499 PKMYT1Q99640 499 aa8.19□□□□□ -1.1
MSH6-211ENST00000606499 CLSTN3Q9BQT9 956 aa8.19□□□□□ -1.1
MSH6-211ENST00000606499 STK33Q9BYT3 514 aa8.19□□□□□ -1.1
MSH6-211ENST00000606499 ACP6Q9NPH0 428 aa8.19□□□□□ -1.1
MSH6-211ENST00000606499 CRTAC1Q9NQ79 661 aa8.19□□□□□ -1.1
MSH6-211ENST00000606499 FAM49BQ9NUQ9 324 aa8.19□□□□□ -1.1
MSH6-211ENST00000606499 TMLHEQ9NVH6 421 aa8.19□□□□□ -1.1
MSH6-211ENST00000606499 CNTN6Q9UQ52 1028 aa8.19□□□□□ -1.1
MSH6-211ENST00000606499 COL6A3P12111 3177 aa8.18□□□□□ -1.1
MSH6-211ENST00000606499 A0A1W2PQJ5 194 aa8.18□□□□□ -1.1
MSH6-211ENST00000606499 WDR27A2RRH5 827 aa8.18□□□□□ -1.1
MSH6-211ENST00000606499 MYBPHLA2RUH7 354 aa8.18□□□□□ -1.1
MSH6-211ENST00000606499 OR6C75A6NL08 312 aa8.18□□□□□ -1.1
MSH6-211ENST00000606499 H7C4K7 107 aa8.18□□□□□ -1.1
MSH6-211ENST00000606499 TEX28O15482 410 aa8.18□□□□□ -1.1
MSH6-211ENST00000606499 CYP26A1O43174 497 aa8.18□□□□□ -1.1
MSH6-211ENST00000606499 MFAP3LO75121 409 aa8.18□□□□□ -1.1
MSH6-211ENST00000606499 FAM163BP0C2L3 166 aa8.18□□□□□ -1.1
MSH6-211ENST00000606499 CCDC130P13994 396 aa8.18□□□□□ -1.1
MSH6-211ENST00000606499 PTPN1P18031 435 aaKnown RBP8.18□□□□□ -1.1
MSH6-211ENST00000606499 PCSK1P29120 753 aa8.18□□□□□ -1.1
MSH6-211ENST00000606499 CDC25BP30305 580 aa8.18□□□□□ -1.1
MSH6-211ENST00000606499 SSTR3P32745 418 aaPredicted RBP8.18□□□□□ -1.1
MSH6-211ENST00000606499 CLCN1P35523 988 aa8.18□□□□□ -1.1
MSH6-211ENST00000606499 SOX5P35711 763 aa8.18□□□□□ -1.1
MSH6-211ENST00000606499 NDUFV1P49821 464 aa8.18□□□□□ -1.1
MSH6-211ENST00000606499 TSPY1Q01534 308 aa8.18□□□□□ -1.1
MSH6-211ENST00000606499 ROR1Q01973 937 aa8.18□□□□□ -1.1
MSH6-211ENST00000606499 ARID5AQ03989 594 aa8.18□□□□□ -1.1
MSH6-211ENST00000606499 TRIM14Q14142 442 aa8.18□□□□□ -1.1
MSH6-211ENST00000606499 INTS6LQ5JSJ4 861 aaKnown RBP8.18□□□□□ -1.1
MSH6-211ENST00000606499 ZNF697Q5TEC3 545 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms