RNA–Protein interactions for RNA: ENST00000606066.1

CTSA-211, Transcript of cathepsin A, humanhuman

TSL 5

Gene CTSA, Length 603 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-211ENST00000606066 BARX2Q9UMQ3 279 aaPredicted RBP15.28■□□□□ 0.04
CTSA-211ENST00000606066 COQ4Q9Y3A0 265 aa15.28■□□□□ 0.04
CTSA-211ENST00000606066 WDR27A2RRH5 827 aa15.27■□□□□ 0.04
CTSA-211ENST00000606066 GABRDO14764 452 aa15.27■□□□□ 0.04
CTSA-211ENST00000606066 TBX10O75333 385 aa15.27■□□□□ 0.04
CTSA-211ENST00000606066 ABLIM3O94929 683 aa15.27■□□□□ 0.04
CTSA-211ENST00000606066 ATF2P15336 505 aa15.27■□□□□ 0.04
CTSA-211ENST00000606066 WARSP23381 471 aaKnown RBP15.27■□□□□ 0.04
CTSA-211ENST00000606066 EEF1GP26641 437 aaKnown RBP15.27■□□□□ 0.04
CTSA-211ENST00000606066 GNL1P36915 607 aaPredicted RBP15.27■□□□□ 0.04
CTSA-211ENST00000606066 NOP14P78316 857 aaKnown RBP15.27■□□□□ 0.04
CTSA-211ENST00000606066 RBM10P98175 930 aaKnown RBP15.27■□□□□ 0.04
CTSA-211ENST00000606066 DLX2Q07687 328 aaPredicted RBP15.27■□□□□ 0.04
CTSA-211ENST00000606066 GPR17Q13304 367 aa15.27■□□□□ 0.04
CTSA-211ENST00000606066 UVSSAQ2YD98 709 aa15.27■□□□□ 0.04
CTSA-211ENST00000606066 ANO6Q4KMQ2 910 aa15.27■□□□□ 0.04
CTSA-211ENST00000606066 CCDC149Q6ZUS6 474 aa15.27■□□□□ 0.04
CTSA-211ENST00000606066 IRF2BP1Q8IU81 584 aa15.27■□□□□ 0.04
CTSA-211ENST00000606066 BPIFA3Q9BQP9 254 aa15.27■□□□□ 0.04
CTSA-211ENST00000606066 SFXN1Q9H9B4 322 aa15.27■□□□□ 0.04
CTSA-211ENST00000606066 AFF4Q9UHB7 1163 aaKnown RBP15.27■□□□□ 0.04
CTSA-211ENST00000606066 CD207Q9UJ71 328 aa15.27■□□□□ 0.04
CTSA-211ENST00000606066 FBXW11Q9UKB1 542 aa15.27■□□□□ 0.04
CTSA-211ENST00000606066 SMTNL1A8MU46 457 aa15.26■□□□□ 0.03
CTSA-211ENST00000606066 CAVIN2O95810 425 aa15.26■□□□□ 0.03
CTSA-211ENST00000606066 SPATA31D3P0C874 917 aa15.26■□□□□ 0.03
CTSA-211ENST00000606066 NHLH1Q02575 133 aa15.26■□□□□ 0.03
CTSA-211ENST00000606066 ITIH3Q06033 890 aa15.26■□□□□ 0.03
CTSA-211ENST00000606066 MAN2A1Q16706 1144 aa15.26■□□□□ 0.03
CTSA-211ENST00000606066 ZSCAN23Q3MJ62 389 aa15.26■□□□□ 0.03
CTSA-211ENST00000606066 CES5AQ6NT32 575 aa15.26■□□□□ 0.03
CTSA-211ENST00000606066 SPATA31D4Q6ZUB0 917 aa15.26■□□□□ 0.03
CTSA-211ENST00000606066 ANKRD20A12PQ8NF67 263 aa15.26■□□□□ 0.03
CTSA-211ENST00000606066 OR6B3Q8NGW1 331 aa15.26■□□□□ 0.03
CTSA-211ENST00000606066 OR10T2Q8NGX3 314 aa15.26■□□□□ 0.03
CTSA-211ENST00000606066 C2orf15Q8WU43 125 aaKnown RBP15.26■□□□□ 0.03
CTSA-211ENST00000606066 MSLNLQ96KJ4 702 aa15.26■□□□□ 0.03
CTSA-211ENST00000606066 RTP3Q9BQQ7 232 aa15.26■□□□□ 0.03
CTSA-211ENST00000606066 PI4K2AQ9BTU6 479 aa15.26■□□□□ 0.03
CTSA-211ENST00000606066 DNAI2Q9GZS0 605 aa15.26■□□□□ 0.03
CTSA-211ENST00000606066 NIF3L1Q9GZT8 377 aa15.26■□□□□ 0.03
CTSA-211ENST00000606066 ZCWPW1Q9H0M4 648 aa15.26■□□□□ 0.03
CTSA-211ENST00000606066 CYP3A43Q9HB55 503 aa15.26■□□□□ 0.03
CTSA-211ENST00000606066 SAMSN1Q9NSI8 373 aaKnown RBP15.26■□□□□ 0.03
CTSA-211ENST00000606066 ZDHHC7Q9NXF8 308 aa15.26■□□□□ 0.03
CTSA-211ENST00000606066 CDH9Q9ULB4 789 aa15.26■□□□□ 0.03
CTSA-211ENST00000606066 POLIQ9UNA4 740 aa15.26■□□□□ 0.03
CTSA-211ENST00000606066 KCNJ18B7U540 433 aa15.25■□□□□ 0.03
CTSA-211ENST00000606066 PRRG1O14668 218 aa15.25■□□□□ 0.03
CTSA-211ENST00000606066 MBTPS2O43462 519 aa15.25■□□□□ 0.03
CTSA-211ENST00000606066 C8AP07357 584 aa15.25■□□□□ 0.03
CTSA-211ENST00000606066 TPM2P07951 284 aa15.25■□□□□ 0.03
CTSA-211ENST00000606066 TRIM21P19474 475 aaKnown RBP15.25■□□□□ 0.03
CTSA-211ENST00000606066 ZNF165P49910 485 aa15.25■□□□□ 0.03
CTSA-211ENST00000606066 ADCY1Q08828 1119 aa15.25■□□□□ 0.03
CTSA-211ENST00000606066 KCNJ12Q14500 433 aa15.25■□□□□ 0.03
CTSA-211ENST00000606066 MAPRE1Q15691 268 aaKnown RBP15.25■□□□□ 0.03
CTSA-211ENST00000606066 NFE2Q16621 373 aaPredicted RBP15.25■□□□□ 0.03
CTSA-211ENST00000606066 SLC39A12Q504Y0 691 aa15.25■□□□□ 0.03
CTSA-211ENST00000606066 TCP11X2Q5H9J9 407 aa15.25■□□□□ 0.03
CTSA-211ENST00000606066 PPM1LQ5SGD2 360 aa15.25■□□□□ 0.03
CTSA-211ENST00000606066 SPOPLQ6IQ16 392 aa15.25■□□□□ 0.03
CTSA-211ENST00000606066 SYCE2Q6PIF2 218 aa15.25■□□□□ 0.03
CTSA-211ENST00000606066 CYP26C1Q6V0L0 522 aa15.25■□□□□ 0.03
CTSA-211ENST00000606066 BMP8AQ7Z5Y6 402 aa15.25■□□□□ 0.03
CTSA-211ENST00000606066 TTC39CQ8N584 583 aa15.25■□□□□ 0.03
CTSA-211ENST00000606066 CMASQ8NFW8 434 aaPredicted RBP15.25■□□□□ 0.03
CTSA-211ENST00000606066 KBTBD7Q8WVZ9 684 aa15.25■□□□□ 0.03
CTSA-211ENST00000606066 SEMA4DQ92854 862 aa15.25■□□□□ 0.03
CTSA-211ENST00000606066 MRPL45Q9BRJ2 306 aaKnown RBP15.25■□□□□ 0.03
CTSA-211ENST00000606066 TUBGCP2Q9BSJ2 902 aa15.25■□□□□ 0.03
CTSA-211ENST00000606066 FUCA2Q9BTY2 467 aa15.25■□□□□ 0.03
CTSA-211ENST00000606066 ADAM7Q9H2U9 754 aa15.25■□□□□ 0.03
CTSA-211ENST00000606066 FAM124BQ9H5Z6 455 aaPredicted RBP15.25■□□□□ 0.03
CTSA-211ENST00000606066 CYP4F11Q9HBI6 524 aa15.25■□□□□ 0.03
CTSA-211ENST00000606066 FANCLQ9NW38 375 aa15.25■□□□□ 0.03
CTSA-211ENST00000606066 BECN2A8MW95 431 aa15.24■□□□□ 0.03
CTSA-211ENST00000606066 A8MXQ7 604 aa15.24■□□□□ 0.03
CTSA-211ENST00000606066 ZMYND10O75800 440 aa15.24■□□□□ 0.03
CTSA-211ENST00000606066 HNRNPA1P09651 372 aaKnown RBP eCLIP15.24■□□□□ 0.03
CTSA-211ENST00000606066 OR4Q2P0C623 313 aa15.24■□□□□ 0.03
CTSA-211ENST00000606066 HOXA9P31269 272 aa15.24■□□□□ 0.03
CTSA-211ENST00000606066 ASPAP45381 313 aa15.24■□□□□ 0.03
CTSA-211ENST00000606066 MRE11P49959 708 aa15.24■□□□□ 0.03
CTSA-211ENST00000606066 SMAD4Q13485 552 aaKnown RBP15.24■□□□□ 0.03
CTSA-211ENST00000606066 VWA3BQ502W6 1294 aa15.24■□□□□ 0.03
CTSA-211ENST00000606066 HSP90AA4PQ58FG1 418 aa15.24■□□□□ 0.03
CTSA-211ENST00000606066 INTS6LQ5JSJ4 861 aaKnown RBP15.24■□□□□ 0.03
CTSA-211ENST00000606066 CDKAL1Q5VV42 579 aa15.24■□□□□ 0.03
CTSA-211ENST00000606066 SCARA5Q6ZMJ2 495 aa15.24■□□□□ 0.03
CTSA-211ENST00000606066 RNF19BQ6ZMZ0 732 aa15.24■□□□□ 0.03
CTSA-211ENST00000606066 HFE2Q6ZVN8 426 aa15.24■□□□□ 0.03
CTSA-211ENST00000606066 OSTM1Q86WC4 334 aa15.24■□□□□ 0.03
CTSA-211ENST00000606066 TCEAL8Q8IYN2 117 aa15.24■□□□□ 0.03
CTSA-211ENST00000606066 SMRP1Q8NCR6 262 aa15.24■□□□□ 0.03
CTSA-211ENST00000606066 SLC7A14Q8TBB6 771 aa15.24■□□□□ 0.03
CTSA-211ENST00000606066 PGLYRP2Q96PD5 576 aa15.24■□□□□ 0.03
CTSA-211ENST00000606066 TMEM209Q96SK2 561 aa15.24■□□□□ 0.03
CTSA-211ENST00000606066 SMYD3Q9H7B4 428 aa15.24■□□□□ 0.03
CTSA-211ENST00000606066 APOBEC3GQ9HC16 384 aaKnown RBP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms