RNA–Protein interactions for RNA: ENST00000604967.1

TUBE1-210, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-210ENST00000604967 CRTAC1Q9NQ79 661 aa11.48□□□□□ -0.57
TUBE1-210ENST00000604967 EXOC1Q9NV70 894 aa11.48□□□□□ -0.57
TUBE1-210ENST00000604967 USP25Q9UHP3 1055 aa11.48□□□□□ -0.57
TUBE1-210ENST00000604967 CA14Q9ULX7 337 aa11.48□□□□□ -0.57
TUBE1-210ENST00000604967 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.48□□□□□ -0.57
TUBE1-210ENST00000604967 SNX9Q9Y5X1 595 aa11.48□□□□□ -0.57
TUBE1-210ENST00000604967 A0A1W2PRU2 124 aa11.47□□□□□ -0.57
TUBE1-210ENST00000604967 KIAA0391O15091 583 aaKnown RBP11.47□□□□□ -0.57
TUBE1-210ENST00000604967 TADA3O75528 432 aa11.47□□□□□ -0.57
TUBE1-210ENST00000604967 C4BPAP04003 597 aaKnown RBP11.47□□□□□ -0.57
TUBE1-210ENST00000604967 TMEM191BP0C7N4 346 aa11.47□□□□□ -0.57
TUBE1-210ENST00000604967 HAPLN1P10915 354 aaPredicted RBP11.47□□□□□ -0.57
TUBE1-210ENST00000604967 PLA2G5P39877 138 aa11.47□□□□□ -0.57
TUBE1-210ENST00000604967 VIPR2P41587 438 aa11.47□□□□□ -0.57
TUBE1-210ENST00000604967 MYL6P60660 151 aa11.47□□□□□ -0.57
TUBE1-210ENST00000604967 PSMC1P62191 440 aaKnown RBP11.47□□□□□ -0.57
TUBE1-210ENST00000604967 DUOXA2Q1HG44 320 aa11.47□□□□□ -0.57
TUBE1-210ENST00000604967 STXBP4Q6ZWJ1 553 aa11.47□□□□□ -0.57
TUBE1-210ENST00000604967 SLC9A9Q8IVB4 645 aa11.47□□□□□ -0.57
TUBE1-210ENST00000604967 RIN3Q8TB24 985 aa11.47□□□□□ -0.57
TUBE1-210ENST00000604967 PARD3BQ8TEW8 1205 aa11.47□□□□□ -0.57
TUBE1-210ENST00000604967 GIPC2Q8TF65 315 aa11.47□□□□□ -0.57
TUBE1-210ENST00000604967 TMEM174Q8WUU8 243 aa11.47□□□□□ -0.57
TUBE1-210ENST00000604967 ZNF560Q96MR9 790 aa11.47□□□□□ -0.57
TUBE1-210ENST00000604967 ASB16Q96NS5 453 aa11.47□□□□□ -0.57
TUBE1-210ENST00000604967 SDCBP2Q9H190 292 aa11.47□□□□□ -0.57
TUBE1-210ENST00000604967 SLC2A4RGQ9NR83 387 aa11.47□□□□□ -0.57
TUBE1-210ENST00000604967 GDE1Q9NZC3 331 aa11.47□□□□□ -0.57
TUBE1-210ENST00000604967 GTF3C4Q9UKN8 822 aa11.47□□□□□ -0.57
TUBE1-210ENST00000604967 DSEQ9UL01 958 aa11.47□□□□□ -0.57
TUBE1-210ENST00000604967 MAFFQ9ULX9 164 aa11.47□□□□□ -0.57
TUBE1-210ENST00000604967 MTF2Q9Y483 593 aaPredicted RBP11.47□□□□□ -0.57
TUBE1-210ENST00000604967 CACNA1HO95180 2353 aa11.47□□□□□ -0.57
TUBE1-210ENST00000604967 PDXKO00764 312 aa11.46□□□□□ -0.57
TUBE1-210ENST00000604967 AKAP3O75969 853 aa11.46□□□□□ -0.57
TUBE1-210ENST00000604967 NR3C1P04150 777 aa11.46□□□□□ -0.57
TUBE1-210ENST00000604967 BMP6P22004 513 aa11.46□□□□□ -0.57
TUBE1-210ENST00000604967 PAX3P23760 479 aa11.46□□□□□ -0.57
TUBE1-210ENST00000604967 CYP2F1P24903 491 aa11.46□□□□□ -0.57
TUBE1-210ENST00000604967 PMS1P54277 932 aaKnown RBP11.46□□□□□ -0.57
TUBE1-210ENST00000604967 CACNA2D1P54289 1103 aa11.46□□□□□ -0.57
TUBE1-210ENST00000604967 SNRPFP62306 86 aaKnown RBP11.46□□□□□ -0.57
TUBE1-210ENST00000604967 NHLH1Q02575 133 aa11.46□□□□□ -0.57
TUBE1-210ENST00000604967 PSMD2Q13200 908 aa11.46□□□□□ -0.57
TUBE1-210ENST00000604967 GRM2Q14416 872 aa11.46□□□□□ -0.57
TUBE1-210ENST00000604967 BECN1Q14457 450 aa11.46□□□□□ -0.57
TUBE1-210ENST00000604967 INTS6LQ5JSJ4 861 aaKnown RBP11.46□□□□□ -0.57
TUBE1-210ENST00000604967 FAM171BQ6P995 826 aa11.46□□□□□ -0.57
TUBE1-210ENST00000604967 ADGRF2Q8IZF7 708 aa11.46□□□□□ -0.57
TUBE1-210ENST00000604967 CACTINQ8WUQ7 758 aaKnown RBP11.46□□□□□ -0.57
TUBE1-210ENST00000604967 PSMG2Q969U7 264 aa11.46□□□□□ -0.57
TUBE1-210ENST00000604967 EEF2KMTQ96G04 330 aa11.46□□□□□ -0.57
TUBE1-210ENST00000604967 ANKRD36BP1Q96IX9 119 aa11.46□□□□□ -0.57
TUBE1-210ENST00000604967 ZNF512Q96ME7 567 aaPredicted RBP11.46□□□□□ -0.57
TUBE1-210ENST00000604967 SEPT5Q99719 369 aaPredicted RBP11.46□□□□□ -0.57
TUBE1-210ENST00000604967 PI4K2AQ9BTU6 479 aa11.46□□□□□ -0.57
TUBE1-210ENST00000604967 OXCT2Q9BYC2 517 aaPredicted RBP11.46□□□□□ -0.57
TUBE1-210ENST00000604967 FOXQ1Q9C009 403 aa11.46□□□□□ -0.57
TUBE1-210ENST00000604967 DPEP3Q9H4B8 488 aa11.46□□□□□ -0.57
TUBE1-210ENST00000604967 KIAA1586Q9HCI6 787 aa11.46□□□□□ -0.57
TUBE1-210ENST00000604967 DDX43Q9NXZ2 648 aaKnown RBP11.46□□□□□ -0.57
TUBE1-210ENST00000604967 ABI2Q9NYB9 513 aaPredicted RBP11.46□□□□□ -0.57
TUBE1-210ENST00000604967 DLGAP2Q9P1A6 1054 aa11.46□□□□□ -0.57
TUBE1-210ENST00000604967 WNT16Q9UBV4 365 aa11.46□□□□□ -0.57
TUBE1-210ENST00000604967 HCN4Q9Y3Q4 1203 aa11.46□□□□□ -0.57
TUBE1-210ENST00000604967 ARIH1Q9Y4X5 557 aaPredicted RBP11.46□□□□□ -0.57
TUBE1-210ENST00000604967 ZFP37Q9Y6Q3 630 aaPredicted RBP11.46□□□□□ -0.57
TUBE1-210ENST00000604967 ARNTLO00327 626 aa11.45□□□□□ -0.58
TUBE1-210ENST00000604967 EXOC3O60645 756 aa11.45□□□□□ -0.58
TUBE1-210ENST00000604967 ECI2O75521 394 aa11.45□□□□□ -0.58
TUBE1-210ENST00000604967 MICAL2O94851 1124 aa11.45□□□□□ -0.58
TUBE1-210ENST00000604967 PRAMEF12O95522 483 aa11.45□□□□□ -0.58
TUBE1-210ENST00000604967 MYL1P05976 194 aa11.45□□□□□ -0.58
TUBE1-210ENST00000604967 PDGFRBP09619 1106 aa11.45□□□□□ -0.58
TUBE1-210ENST00000604967 PNPLA4P41247 253 aa11.45□□□□□ -0.58
TUBE1-210ENST00000604967 RAP1GAPP47736 663 aa11.45□□□□□ -0.58
TUBE1-210ENST00000604967 CDH8P55286 799 aa11.45□□□□□ -0.58
TUBE1-210ENST00000604967 MCCD1P59942 119 aaPredicted RBP11.45□□□□□ -0.58
TUBE1-210ENST00000604967 CYP4F8P98187 520 aa11.45□□□□□ -0.58
TUBE1-210ENST00000604967 KCNB1Q14721 858 aa11.45□□□□□ -0.58
TUBE1-210ENST00000604967 DDR2Q16832 855 aa11.45□□□□□ -0.58
TUBE1-210ENST00000604967 WDR44Q5JSH3 913 aa11.45□□□□□ -0.58
TUBE1-210ENST00000604967 ASTLQ6HA08 431 aaPredicted RBP11.45□□□□□ -0.58
TUBE1-210ENST00000604967 VITQ6UXI7 678 aa11.45□□□□□ -0.58
TUBE1-210ENST00000604967 PDZD4Q76G19 769 aaPredicted RBP11.45□□□□□ -0.58
TUBE1-210ENST00000604967 HS2ST1Q7LGA3 356 aa11.45□□□□□ -0.58
TUBE1-210ENST00000604967 ZNF687Q8N1G0 1237 aa11.45□□□□□ -0.58
TUBE1-210ENST00000604967 TOP6BLQ8N6T0 577 aa11.45□□□□□ -0.58
TUBE1-210ENST00000604967 FLCNQ8NFG4 579 aa11.45□□□□□ -0.58
TUBE1-210ENST00000604967 SPATA20Q8TB22 786 aa11.45□□□□□ -0.58
TUBE1-210ENST00000604967 NXPE3Q969Y0 559 aa11.45□□□□□ -0.58
TUBE1-210ENST00000604967 ACBD6Q9BR61 282 aa11.45□□□□□ -0.58
TUBE1-210ENST00000604967 DDX23Q9BUQ8 820 aaKnown RBP11.45□□□□□ -0.58
TUBE1-210ENST00000604967 SMG9Q9H0W8 520 aaKnown RBP11.45□□□□□ -0.58
TUBE1-210ENST00000604967 SMYD3Q9H7B4 428 aa11.45□□□□□ -0.58
TUBE1-210ENST00000604967 TRPV4Q9HBA0 871 aa11.45□□□□□ -0.58
TUBE1-210ENST00000604967 ASAH2Q9NR71 780 aa11.45□□□□□ -0.58
TUBE1-210ENST00000604967 FAM86C1Q9NVL1 165 aa11.45□□□□□ -0.58
TUBE1-210ENST00000604967 HSFX1Q9UBD0 423 aa11.45□□□□□ -0.58
TUBE1-210ENST00000604967 TRAF3IP3Q9Y228 551 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms