RNA–Protein interactions for RNA: ENST00000604516.1

HMGN3-AS1-201, HMGN3 antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene HMGN3-AS1, Length 2,946 nt, Biotype antisense RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-AS1-201ENST00000604516 FASTKD3Q14CZ7 662 aaKnown RBP12.47□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 PTPN20Q4JDL3 420 aa12.47□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 MFSD5Q6N075 450 aa12.47□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 MPZL3Q6UWV2 235 aa12.47□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 DPH6Q7L8W6 267 aa12.47□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 YTHDF3Q7Z739 585 aaKnown RBP12.47□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 KIAA0319LQ8IZA0 1049 aa12.47□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 JOSD2Q8TAC2 188 aa12.47□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 RBM15Q96T37 977 aaKnown RBP eCLIP12.47□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 ELAC2Q9BQ52 826 aaKnown RBP12.47□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 TMEM121Q9BTD3 319 aa12.47□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 ZWILCHQ9H900 591 aa12.47□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 PTPRHQ9HD43 1115 aa12.47□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 IGKV6-21A0A0C4DH24 114 aa12.46□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 A0A0G2JLL6 359 aaPredicted RBP12.46□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 GPR25O00155 361 aa12.46□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 CALB1P05937 261 aa12.46□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 NFICP08651 508 aa12.46□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 SYDE1Q6ZW31 735 aaPredicted RBP12.46□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 PRRT2Q7Z6L0 340 aaPredicted RBP12.46□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 CCDC13Q8IYE1 715 aa12.46□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 RCOR2Q8IZ40 523 aa12.46□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 FAM167AQ96KS9 214 aa12.46□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 TWNKQ96RR1 684 aa12.46□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 ROPN1BQ9BZX4 212 aaPredicted RBP12.46□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 ROPN1Q9HAT0 212 aaPredicted RBP12.46□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.46□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 MGAMO43451 1857 aa12.46□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 PIK3R2O00459 728 aa12.46□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 ACKR2O00590 384 aa12.46□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 ARSEP51690 589 aa12.46□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 GPS1Q13098 491 aa12.46□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 KCTD2Q14681 263 aa12.46□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 VSTM1Q6UX27 236 aa12.46□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 SPOCD1Q6ZMY3 1216 aa12.46□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 TSHZ1Q6ZSZ6 1077 aa12.46□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 ARFGAP1Q8N6T3 406 aa12.46□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 GDAP1Q8TB36 358 aa12.46□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 TCP11Q8WWU5 503 aa12.46□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 MRRFQ96E11 262 aaKnown RBP12.46□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 SDCBP2Q9H190 292 aa12.46□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 CDT1Q9H211 546 aa12.46□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 HOMER3Q9NSC5 361 aa12.46□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 SIX4Q9UIU6 781 aa12.46□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 GGT7Q9UJ14 662 aa12.46□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 PAPPA2Q9BXP8 1791 aa12.46□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 GOLGA8MH3BSY2 632 aa12.45□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 PIAS1O75925 651 aa12.45□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 IL1R2P27930 398 aa12.45□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 AP3M2P53677 418 aa12.45□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 CCDC62Q6P9F0 684 aa12.45□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 TAOK1Q7L7X3 1001 aa12.45□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 DYDC1Q8WWB3 177 aa12.45□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 CPB2Q96IY4 423 aa12.45□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 SERPINB12Q96P63 405 aa12.45□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 FZD8Q9H461 694 aa12.45□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 SMYD3Q9H7B4 428 aa12.45□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 NAALADL1Q9UQQ1 740 aa12.45□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 SIP14410 1827 aa12.45□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 LGR5O75473 907 aa12.45□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 BANF1O75531 89 aa12.45□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 TJP3O95049 919 aa12.45□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 FSBPO95073 299 aa12.45□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 TNNC2P02585 160 aa12.45□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 PROZP22891 400 aa12.45□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 PPP1R15BQ5SWA1 713 aa12.45□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 HIBCHQ6NVY1 386 aaPredicted RBP12.45□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 SRRM1Q8IYB3 904 aaKnown RBP12.45□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 C1orf127Q8N9H9 656 aa12.45□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 C3orf20Q8ND61 904 aa12.45□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 CPXM1Q96SM3 734 aa12.45□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 MMP19Q99542 508 aa12.45□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 ATXN2Q99700 1313 aaKnown RBP12.45□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 STMN4Q9H169 189 aaPredicted RBP12.45□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 EFCC1Q9HA90 598 aa12.45□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 SAYSD1Q9NPB0 183 aa12.45□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 PCSK1NQ9UHG2 260 aa12.45□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 CD48P09326 243 aa12.44□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 KRT3P12035 628 aa12.44□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 PECAM1P16284 738 aaPredicted RBP12.44□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 PSMA2P25787 234 aa12.44□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 MAGEA4P43358 317 aa12.44□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 IREB2P48200 963 aaKnown RBP12.44□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 GAD2Q05329 585 aa12.44□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 MBTD1Q05BQ5 628 aa12.44□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 ACTN3Q08043 901 aaPredicted RBP12.44□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 TAF5Q15542 800 aa12.44□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 KCNV1Q6PIU1 500 aa12.44□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 PLPPR4Q7Z2D5 763 aa12.44□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 CROCCP2Q86T23 111 aa12.44□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 ANKRD36BP1Q96IX9 119 aa12.44□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 RBM41Q96IZ5 413 aaKnown RBP12.44□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 GGA2Q9UJY4 613 aa12.44□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 hCG_1818297A0A087WSY0 165 aa12.44□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 A0A087WZ62 844 aa12.44□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 LACTBL1A8MY62 500 aa12.44□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 LSM8O95777 96 aaKnown RBP12.44□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 ITGB3P05106 788 aa12.44□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 CYP2C8P10632 490 aa12.44□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 BRAFP15056 766 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms