RNA–Protein interactions for RNA: ENST00000603451.1

SQSTM1P1-201, Transcript of sequestosome 1 pseudogene 1, humanhuman

BASIC

Gene SQSTM1P1, Length 859 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1P1-201ENST00000603451 FKBP15Q5T1M5 1219 aa10.13□□□□□ -0.79
SQSTM1P1-201ENST00000603451 TRIM65Q6PJ69 517 aa10.13□□□□□ -0.79
SQSTM1P1-201ENST00000603451 C4orf50Q6ZRC1 276 aa10.13□□□□□ -0.79
SQSTM1P1-201ENST00000603451 EHBP1Q8NDI1 1231 aa10.13□□□□□ -0.79
SQSTM1P1-201ENST00000603451 LMO3Q8TAP4 145 aa10.13□□□□□ -0.79
SQSTM1P1-201ENST00000603451 HLA-CQ95604 372 aa10.13□□□□□ -0.79
SQSTM1P1-201ENST00000603451 FAM84AQ96KN4 292 aa10.13□□□□□ -0.79
SQSTM1P1-201ENST00000603451 RTP3Q9BQQ7 232 aa10.13□□□□□ -0.79
SQSTM1P1-201ENST00000603451 HSD3B7Q9H2F3 369 aa10.13□□□□□ -0.79
SQSTM1P1-201ENST00000603451 TSPY26PQ9H489 355 aa10.13□□□□□ -0.79
SQSTM1P1-201ENST00000603451 UBE2ZQ9H832 354 aaPredicted RBP10.13□□□□□ -0.79
SQSTM1P1-201ENST00000603451 NXF1Q9UBU9 619 aaKnown RBP10.13□□□□□ -0.79
SQSTM1P1-201ENST00000603451 BARX2Q9UMQ3 279 aaPredicted RBP10.13□□□□□ -0.79
SQSTM1P1-201ENST00000603451 FAM50BQ9Y247 325 aa10.13□□□□□ -0.79
SQSTM1P1-201ENST00000603451 PATJQ8NI35 1801 aa10.12□□□□□ -0.79
SQSTM1P1-201ENST00000603451 ATP8B3O60423 1300 aa10.12□□□□□ -0.79
SQSTM1P1-201ENST00000603451 LGALS16A8MUM7 142 aa10.12□□□□□ -0.79
SQSTM1P1-201ENST00000603451 A8MXQ7 604 aa10.12□□□□□ -0.79
SQSTM1P1-201ENST00000603451 TBX10O75333 385 aa10.12□□□□□ -0.79
SQSTM1P1-201ENST00000603451 CILPO75339 1184 aa10.12□□□□□ -0.79
SQSTM1P1-201ENST00000603451 ZMYND10O75800 440 aa10.12□□□□□ -0.79
SQSTM1P1-201ENST00000603451 CDK11BP21127 795 aaKnown RBP10.12□□□□□ -0.79
SQSTM1P1-201ENST00000603451 ELF1P32519 619 aa10.12□□□□□ -0.79
SQSTM1P1-201ENST00000603451 GNL1P36915 607 aaPredicted RBP10.12□□□□□ -0.79
SQSTM1P1-201ENST00000603451 TUFMP49411 452 aaKnown RBP10.12□□□□□ -0.79
SQSTM1P1-201ENST00000603451 MEA1Q16626 185 aa10.12□□□□□ -0.79
SQSTM1P1-201ENST00000603451 FILIP1LQ4L180 1135 aa10.12□□□□□ -0.79
SQSTM1P1-201ENST00000603451 ANKRD54Q6NXT1 300 aa10.12□□□□□ -0.79
SQSTM1P1-201ENST00000603451 FAM171BQ6P995 826 aa10.12□□□□□ -0.79
SQSTM1P1-201ENST00000603451 VSTM1Q6UX27 236 aa10.12□□□□□ -0.79
SQSTM1P1-201ENST00000603451 RBM23Q86U06 439 aaKnown RBP10.12□□□□□ -0.79
SQSTM1P1-201ENST00000603451 FMNL3Q8IVF7 1028 aa10.12□□□□□ -0.79
SQSTM1P1-201ENST00000603451 CRYBG2Q8N1P7 616 aa10.12□□□□□ -0.79
SQSTM1P1-201ENST00000603451 B3GALNT2Q8NCR0 500 aa10.12□□□□□ -0.79
SQSTM1P1-201ENST00000603451 SMRP1Q8NCR6 262 aa10.12□□□□□ -0.79
SQSTM1P1-201ENST00000603451 KREMEN2Q8NCW0 462 aa10.12□□□□□ -0.79
SQSTM1P1-201ENST00000603451 OR10T2Q8NGX3 314 aa10.12□□□□□ -0.79
SQSTM1P1-201ENST00000603451 SEMA4DQ92854 862 aa10.12□□□□□ -0.79
SQSTM1P1-201ENST00000603451 MSLNLQ96KJ4 702 aa10.12□□□□□ -0.79
SQSTM1P1-201ENST00000603451 NECTIN4Q96NY8 510 aa10.12□□□□□ -0.79
SQSTM1P1-201ENST00000603451 PKMYT1Q99640 499 aa10.12□□□□□ -0.79
SQSTM1P1-201ENST00000603451 SYT15Q9BQS2 421 aa10.12□□□□□ -0.79
SQSTM1P1-201ENST00000603451 NT5C1AQ9BXI3 368 aa10.12□□□□□ -0.79
SQSTM1P1-201ENST00000603451 INTS2Q9H0H0 1204 aaKnown RBP10.12□□□□□ -0.79
SQSTM1P1-201ENST00000603451 SMYD3Q9H7B4 428 aa10.12□□□□□ -0.79
SQSTM1P1-201ENST00000603451 APOBEC3GQ9HC16 384 aaKnown RBP10.12□□□□□ -0.79
SQSTM1P1-201ENST00000603451 CBX8Q9HC52 389 aa10.12□□□□□ -0.79
SQSTM1P1-201ENST00000603451 PLCB1Q9NQ66 1216 aa10.12□□□□□ -0.79
SQSTM1P1-201ENST00000603451 MAN1C1Q9NR34 630 aa10.12□□□□□ -0.79
SQSTM1P1-201ENST00000603451 CLDND1Q9NY35 253 aa10.12□□□□□ -0.79
SQSTM1P1-201ENST00000603451 THEGQ9P2T0 379 aa10.12□□□□□ -0.79
SQSTM1P1-201ENST00000603451 APEX2Q9UBZ4 518 aa10.12□□□□□ -0.79
SQSTM1P1-201ENST00000603451 PCDHGC5Q9Y5F6 944 aa10.12□□□□□ -0.79
SQSTM1P1-201ENST00000603451 TIMM13Q9Y5L4 95 aaPredicted RBP10.12□□□□□ -0.79
SQSTM1P1-201ENST00000603451 MTMR11A4FU01 709 aa10.11□□□□□ -0.79
SQSTM1P1-201ENST00000603451 PER2O15055 1255 aa10.11□□□□□ -0.79
SQSTM1P1-201ENST00000603451 XYLBO75191 536 aa10.11□□□□□ -0.79
SQSTM1P1-201ENST00000603451 TPM3P06753 285 aa10.11□□□□□ -0.79
SQSTM1P1-201ENST00000603451 C8AP07357 584 aa10.11□□□□□ -0.79
SQSTM1P1-201ENST00000603451 EPCAMP16422 314 aa10.11□□□□□ -0.79
SQSTM1P1-201ENST00000603451 RPL17P18621 184 aaKnown RBP10.11□□□□□ -0.79
SQSTM1P1-201ENST00000603451 MAGEA11P43364 429 aa10.11□□□□□ -0.79
SQSTM1P1-201ENST00000603451 COPB1P53618 953 aaKnown RBP10.11□□□□□ -0.79
SQSTM1P1-201ENST00000603451 MFAP3P55082 362 aa10.11□□□□□ -0.79
SQSTM1P1-201ENST00000603451 SMAD4Q13485 552 aaKnown RBP10.11□□□□□ -0.79
SQSTM1P1-201ENST00000603451 STILQ15468 1287 aa10.11□□□□□ -0.79
SQSTM1P1-201ENST00000603451 LEXMQ3ZCV2 418 aa10.11□□□□□ -0.79
SQSTM1P1-201ENST00000603451 SLC39A12Q504Y0 691 aa10.11□□□□□ -0.79
SQSTM1P1-201ENST00000603451 CES5AQ6NT32 575 aa10.11□□□□□ -0.79
SQSTM1P1-201ENST00000603451 RSPO2Q6UXX9 243 aaPredicted RBP10.11□□□□□ -0.79
SQSTM1P1-201ENST00000603451 SCARA5Q6ZMJ2 495 aa10.11□□□□□ -0.79
SQSTM1P1-201ENST00000603451 TMEM130Q8N3G9 435 aa10.11□□□□□ -0.79
SQSTM1P1-201ENST00000603451 LEMD2Q8NC56 503 aa10.11□□□□□ -0.79
SQSTM1P1-201ENST00000603451 VN1R2Q8NFZ6 395 aa10.11□□□□□ -0.79
SQSTM1P1-201ENST00000603451 OR6B3Q8NGW1 331 aa10.11□□□□□ -0.79
SQSTM1P1-201ENST00000603451 MYCBPAPQ8TBZ2 947 aa10.11□□□□□ -0.79
SQSTM1P1-201ENST00000603451 ATXN2LQ8WWM7 1075 aaKnown RBP10.11□□□□□ -0.79
SQSTM1P1-201ENST00000603451 IQCDQ96DY2 449 aa10.11□□□□□ -0.79
SQSTM1P1-201ENST00000603451 ERGIC2Q96RQ1 377 aa10.11□□□□□ -0.79
SQSTM1P1-201ENST00000603451 PI4K2AQ9BTU6 479 aa10.11□□□□□ -0.79
SQSTM1P1-201ENST00000603451 ELOVL4Q9GZR5 314 aa10.11□□□□□ -0.79
SQSTM1P1-201ENST00000603451 CISHQ9NSE2 258 aa10.11□□□□□ -0.79
SQSTM1P1-201ENST00000603451 EHD2Q9NZN4 543 aa10.11□□□□□ -0.79
SQSTM1P1-201ENST00000603451 CD207Q9UJ71 328 aa10.11□□□□□ -0.79
SQSTM1P1-201ENST00000603451 KIAA1257Q9ULG3 409 aa10.11□□□□□ -0.79
SQSTM1P1-201ENST00000603451 CNTN6Q9UQ52 1028 aa10.11□□□□□ -0.79
SQSTM1P1-201ENST00000603451 ASB3Q9Y575 518 aa10.11□□□□□ -0.79
SQSTM1P1-201ENST00000603451 PCDHB5Q9Y5E4 795 aa10.11□□□□□ -0.79
SQSTM1P1-201ENST00000603451 C2orf16Q68DN1 1984 aa10.1□□□□□ -0.79
SQSTM1P1-201ENST00000603451 A0A1W2PQC6 194 aa10.1□□□□□ -0.79
SQSTM1P1-201ENST00000603451 SPDYE4A6NLX3 237 aa10.1□□□□□ -0.79
SQSTM1P1-201ENST00000603451 PRRG1O14668 218 aa10.1□□□□□ -0.79
SQSTM1P1-201ENST00000603451 ADAM12O43184 909 aa10.1□□□□□ -0.79
SQSTM1P1-201ENST00000603451 CSPG5O95196 566 aa10.1□□□□□ -0.79
SQSTM1P1-201ENST00000603451 FGF19O95750 216 aa10.1□□□□□ -0.79
SQSTM1P1-201ENST00000603451 PAEPP09466 180 aa10.1□□□□□ -0.79
SQSTM1P1-201ENST00000603451 PON1P27169 355 aa10.1□□□□□ -0.79
SQSTM1P1-201ENST00000603451 LTBRP36941 435 aa10.1□□□□□ -0.79
SQSTM1P1-201ENST00000603451 MTHFRP42898 656 aa10.1□□□□□ -0.79
SQSTM1P1-201ENST00000603451 NDST1P52848 882 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms