RNA–Protein interactions for RNA: ENST00000602783.1

PPFIA3-209, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 980 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-209ENST00000602783 TNMDQ9H2S6 317 aa22.87■■□□□ 1.25
PPFIA3-209ENST00000602783 CHRDQ9H2X0 955 aa22.87■■□□□ 1.25
PPFIA3-209ENST00000602783 PCDHB13Q9Y5F0 798 aa22.87■■□□□ 1.25
PPFIA3-209ENST00000602783 TICRRQ7Z2Z1 1910 aa22.86■■□□□ 1.25
PPFIA3-209ENST00000602783 CUTAO60888 179 aa22.86■■□□□ 1.25
PPFIA3-209ENST00000602783 ATF6P18850 670 aa22.86■■□□□ 1.25
PPFIA3-209ENST00000602783 FCHO2Q0JRZ9 810 aa22.86■■□□□ 1.25
PPFIA3-209ENST00000602783 ALCAMQ13740 583 aa22.86■■□□□ 1.25
PPFIA3-209ENST00000602783 VEPH1Q14D04 833 aa22.86■■□□□ 1.25
PPFIA3-209ENST00000602783 TAF12Q16514 161 aa22.86■■□□□ 1.25
PPFIA3-209ENST00000602783 SV2CQ496J9 727 aa22.86■■□□□ 1.25
PPFIA3-209ENST00000602783 SHC4Q6S5L8 630 aa22.86■■□□□ 1.25
PPFIA3-209ENST00000602783 NT5DC4Q86YG4 428 aa22.86■■□□□ 1.25
PPFIA3-209ENST00000602783 NELL1Q92832 810 aa22.86■■□□□ 1.25
PPFIA3-209ENST00000602783 SAAL1Q96ER3 474 aa22.86■■□□□ 1.25
PPFIA3-209ENST00000602783 PRMT8Q9NR22 394 aaPredicted RBP22.86■■□□□ 1.25
PPFIA3-209ENST00000602783 FRYLO94915 3013 aa22.86■■□□□ 1.25
PPFIA3-209ENST00000602783 DCHS1Q96JQ0 3298 aa22.85■■□□□ 1.25
PPFIA3-209ENST00000602783 PDIA4P13667 645 aaKnown RBP22.85■■□□□ 1.25
PPFIA3-209ENST00000602783 KPNA1P52294 538 aaPredicted RBP22.85■■□□□ 1.25
PPFIA3-209ENST00000602783 WNT7BP56706 349 aa22.85■■□□□ 1.25
PPFIA3-209ENST00000602783 TFAMQ00059 246 aaKnown RBP22.85■■□□□ 1.25
PPFIA3-209ENST00000602783 SMARCB1Q12824 385 aa22.85■■□□□ 1.25
PPFIA3-209ENST00000602783 PKP1Q13835 747 aa22.85■■□□□ 1.25
PPFIA3-209ENST00000602783 CCDC65Q8IXS2 484 aa22.85■■□□□ 1.25
PPFIA3-209ENST00000602783 SYCP3Q8IZU3 236 aa22.85■■□□□ 1.25
PPFIA3-209ENST00000602783 SPPL2BQ8TCT7 592 aa22.85■■□□□ 1.25
PPFIA3-209ENST00000602783 GIPC2Q8TF65 315 aa22.85■■□□□ 1.25
PPFIA3-209ENST00000602783 C2orf15Q8WU43 125 aaKnown RBP22.85■■□□□ 1.25
PPFIA3-209ENST00000602783 DHX58Q96C10 678 aa22.85■■□□□ 1.25
PPFIA3-209ENST00000602783 LRRC3BQ96PB8 259 aa22.85■■□□□ 1.25
PPFIA3-209ENST00000602783 CUEDC2Q9H467 287 aa22.85■■□□□ 1.25
PPFIA3-209ENST00000602783 LILRB5O75023 590 aa22.84■■□□□ 1.25
PPFIA3-209ENST00000602783 LDHAP00338 332 aaKnown RBP22.84■■□□□ 1.25
PPFIA3-209ENST00000602783 HAPLN1P10915 354 aaPredicted RBP22.84■■□□□ 1.25
PPFIA3-209ENST00000602783 MLLT6P55198 1093 aaPredicted RBP22.84■■□□□ 1.25
PPFIA3-209ENST00000602783 CYP4F8P98187 520 aa22.84■■□□□ 1.25
PPFIA3-209ENST00000602783 ERMP1Q7Z2K6 904 aa22.84■■□□□ 1.25
PPFIA3-209ENST00000602783 BRSK2Q8IWQ3 736 aa22.84■■□□□ 1.25
PPFIA3-209ENST00000602783 DCP1BQ8IZD4 617 aaKnown RBP22.84■■□□□ 1.25
PPFIA3-209ENST00000602783 RMDN1Q96DB5 314 aa22.84■■□□□ 1.25
PPFIA3-209ENST00000602783 ZNF560Q96MR9 790 aa22.84■■□□□ 1.25
PPFIA3-209ENST00000602783 TASP1Q9H6P5 420 aa22.84■■□□□ 1.25
PPFIA3-209ENST00000602783 C8orf33Q9H7E9 229 aaPredicted RBP22.84■■□□□ 1.25
PPFIA3-209ENST00000602783 KBTBD4Q9NVX7 518 aa22.84■■□□□ 1.25
PPFIA3-209ENST00000602783 ABI2Q9NYB9 513 aaPredicted RBP22.84■■□□□ 1.25
PPFIA3-209ENST00000602783 AGAP1Q9UPQ3 857 aa22.84■■□□□ 1.25
PPFIA3-209ENST00000602783 COL4A2P08572 1712 aa22.84■■□□□ 1.25
PPFIA3-209ENST00000602783 GOLGA8IPA6NC78 632 aa22.83■■□□□ 1.25
PPFIA3-209ENST00000602783 GOLGA8JA6NMD2 632 aa22.83■■□□□ 1.25
PPFIA3-209ENST00000602783 SLC38A8A6NNN8 435 aa22.83■■□□□ 1.25
PPFIA3-209ENST00000602783 PRPF6O94906 941 aaKnown RBP22.83■■□□□ 1.25
PPFIA3-209ENST00000602783 CHRNB1P11230 501 aa22.83■■□□□ 1.25
PPFIA3-209ENST00000602783 GARTP22102 1010 aa22.83■■□□□ 1.25
PPFIA3-209ENST00000602783 CDC25CP30307 473 aa22.83■■□□□ 1.25
PPFIA3-209ENST00000602783 POLR2BP30876 1174 aaKnown RBP22.83■■□□□ 1.25
PPFIA3-209ENST00000602783 PNPLA4P41247 253 aa22.83■■□□□ 1.25
PPFIA3-209ENST00000602783 SOX9P48436 509 aa22.83■■□□□ 1.25
PPFIA3-209ENST00000602783 MAMSTRQ6ZN01 415 aa22.83■■□□□ 1.25
PPFIA3-209ENST00000602783 TTC8Q8TAM2 541 aa22.83■■□□□ 1.25
PPFIA3-209ENST00000602783 NOC3LQ8WTT2 800 aaKnown RBP22.83■■□□□ 1.25
PPFIA3-209ENST00000602783 CACTINQ8WUQ7 758 aaKnown RBP22.83■■□□□ 1.25
PPFIA3-209ENST00000602783 ZFYVE19Q96K21 471 aa22.83■■□□□ 1.25
PPFIA3-209ENST00000602783 GCNAQ96QF7 691 aa22.83■■□□□ 1.25
PPFIA3-209ENST00000602783 IER2Q9BTL4 223 aa22.83■■□□□ 1.25
PPFIA3-209ENST00000602783 FAM126AQ9BYI3 521 aaPredicted RBP22.83■■□□□ 1.25
PPFIA3-209ENST00000602783 TRIM9Q9C026 710 aa22.83■■□□□ 1.25
PPFIA3-209ENST00000602783 LRRC27Q9C0I9 530 aa22.83■■□□□ 1.25
PPFIA3-209ENST00000602783 IL21Q9HBE4 155 aa22.83■■□□□ 1.25
PPFIA3-209ENST00000602783 OBP2AQ9NY56 170 aa22.83■■□□□ 1.25
PPFIA3-209ENST00000602783 RBAKQ9NYW8 714 aaPredicted RBP22.83■■□□□ 1.25
PPFIA3-209ENST00000602783 NCDNQ9UBB6 729 aa22.83■■□□□ 1.25
PPFIA3-209ENST00000602783 ITGB3P05106 788 aa22.82■■□□□ 1.24
PPFIA3-209ENST00000602783 ARHGAP29Q52LW3 1261 aa22.82■■□□□ 1.24
PPFIA3-209ENST00000602783 C1orf127Q8N9H9 656 aa22.82■■□□□ 1.24
PPFIA3-209ENST00000602783 IQUBQ8NA54 791 aa22.82■■□□□ 1.24
PPFIA3-209ENST00000602783 GLIS3Q8NEA6 775 aa22.82■■□□□ 1.24
PPFIA3-209ENST00000602783 HPS3Q969F9 1004 aa22.82■■□□□ 1.24
PPFIA3-209ENST00000602783 MSANTD3Q96H12 275 aa22.82■■□□□ 1.24
PPFIA3-209ENST00000602783 CBWD1Q9BRT8 395 aa22.82■■□□□ 1.24
PPFIA3-209ENST00000602783 PCIF1Q9H4Z3 704 aa22.82■■□□□ 1.24
PPFIA3-209ENST00000602783 TMLHEQ9NVH6 421 aa22.82■■□□□ 1.24
PPFIA3-209ENST00000602783 PCDHB5Q9Y5E4 795 aa22.82■■□□□ 1.24
PPFIA3-209ENST00000602783 DMXL1Q9Y485 3027 aa22.82■■□□□ 1.24
PPFIA3-209ENST00000602783 PRAMEF12O95522 483 aa22.81■■□□□ 1.24
PPFIA3-209ENST00000602783 WEE1P30291 646 aa22.81■■□□□ 1.24
PPFIA3-209ENST00000602783 CCR3P51677 355 aa22.81■■□□□ 1.24
PPFIA3-209ENST00000602783 NRLP54845 237 aa22.81■■□□□ 1.24
PPFIA3-209ENST00000602783 ASIC1P78348 528 aa22.81■■□□□ 1.24
PPFIA3-209ENST00000602783 TSPY1Q01534 308 aa22.81■■□□□ 1.24
PPFIA3-209ENST00000602783 PPP2R5DQ14738 602 aa22.81■■□□□ 1.24
PPFIA3-209ENST00000602783 SCARA3Q6AZY7 606 aa22.81■■□□□ 1.24
PPFIA3-209ENST00000602783 C1orf228Q6PIY5 440 aa22.81■■□□□ 1.24
PPFIA3-209ENST00000602783 CSGALNACT2Q8N6G5 542 aa22.81■■□□□ 1.24
PPFIA3-209ENST00000602783 BPIFB1Q8TDL5 484 aa22.81■■□□□ 1.24
PPFIA3-209ENST00000602783 FAM84AQ96KN4 292 aa22.81■■□□□ 1.24
PPFIA3-209ENST00000602783 SLC46A2Q9BY10 475 aa22.81■■□□□ 1.24
PPFIA3-209ENST00000602783 EPC1Q9H2F5 836 aa22.81■■□□□ 1.24
PPFIA3-209ENST00000602783 TMEM206Q9H813 350 aa22.81■■□□□ 1.24
PPFIA3-209ENST00000602783 GTSE1Q9NYZ3 720 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms