RNA–Protein interactions for RNA: ENST00000602726.1

PPFIA3-208, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-208ENST00000602726 SRFP11831 508 aa23.48■■□□□ 1.35
PPFIA3-208ENST00000602726 ACAT1P24752 427 aaKnown RBP23.48■■□□□ 1.35
PPFIA3-208ENST00000602726 CCR2P41597 374 aa23.48■■□□□ 1.35
PPFIA3-208ENST00000602726 CASP4P49662 377 aa23.48■■□□□ 1.35
PPFIA3-208ENST00000602726 EPHA5P54756 1037 aa23.48■■□□□ 1.35
PPFIA3-208ENST00000602726 NFE2Q16621 373 aaPredicted RBP23.48■■□□□ 1.35
PPFIA3-208ENST00000602726 CEP135Q66GS9 1140 aa23.48■■□□□ 1.35
PPFIA3-208ENST00000602726 FAM200AQ8TCP9 573 aa23.48■■□□□ 1.35
PPFIA3-208ENST00000602726 MMS19Q96T76 1030 aa23.48■■□□□ 1.35
PPFIA3-208ENST00000602726 RPP25Q9BUL9 199 aaKnown RBP23.48■■□□□ 1.35
PPFIA3-208ENST00000602726 DNAJC25Q9H1X3 360 aa23.48■■□□□ 1.35
PPFIA3-208ENST00000602726 MFSD1Q9H3U5 465 aa23.48■■□□□ 1.35
PPFIA3-208ENST00000602726 RMND1Q9NWS8 449 aa23.48■■□□□ 1.35
PPFIA3-208ENST00000602726 HOOK1Q9UJC3 728 aaKnown RBP23.48■■□□□ 1.35
PPFIA3-208ENST00000602726 PCDHB5Q9Y5E4 795 aa23.48■■□□□ 1.35
PPFIA3-208ENST00000602726 ZNF318Q5VUA4 2279 aa23.48■■□□□ 1.35
PPFIA3-208ENST00000602726 CFHP08603 1231 aa23.47■■□□□ 1.35
PPFIA3-208ENST00000602726 PCSK1P29120 753 aa23.47■■□□□ 1.35
PPFIA3-208ENST00000602726 AP3M2P53677 418 aa23.47■■□□□ 1.35
PPFIA3-208ENST00000602726 BIRC3Q13489 604 aa23.47■■□□□ 1.35
PPFIA3-208ENST00000602726 VEPH1Q14D04 833 aa23.47■■□□□ 1.35
PPFIA3-208ENST00000602726 DNAJB7Q7Z6W7 309 aaPredicted RBP23.47■■□□□ 1.35
PPFIA3-208ENST00000602726 ITIH5Q86UX2 942 aa23.47■■□□□ 1.35
PPFIA3-208ENST00000602726 OSTM1Q86WC4 334 aa23.47■■□□□ 1.35
PPFIA3-208ENST00000602726 PLEKHO2Q8TD55 490 aa23.47■■□□□ 1.35
PPFIA3-208ENST00000602726 PARD3BQ8TEW8 1205 aa23.47■■□□□ 1.35
PPFIA3-208ENST00000602726 TMLHEQ9NVH6 421 aa23.47■■□□□ 1.35
PPFIA3-208ENST00000602726 LRRIQ3A6PVS8 624 aaPredicted RBP23.46■■□□□ 1.35
PPFIA3-208ENST00000602726 GABRDO14764 452 aa23.46■■□□□ 1.35
PPFIA3-208ENST00000602726 SMC2O95347 1197 aa23.46■■□□□ 1.35
PPFIA3-208ENST00000602726 HAPLN1P10915 354 aaPredicted RBP23.46■■□□□ 1.35
PPFIA3-208ENST00000602726 INTS6LQ5JSJ4 861 aaKnown RBP23.46■■□□□ 1.35
PPFIA3-208ENST00000602726 MUC6Q6W4X9 2439 aa23.46■■□□□ 1.35
PPFIA3-208ENST00000602726 LIMS2Q7Z4I7 341 aa23.46■■□□□ 1.35
PPFIA3-208ENST00000602726 PSMG2Q969U7 264 aa23.46■■□□□ 1.35
PPFIA3-208ENST00000602726 TIGD1Q96MW7 591 aa23.46■■□□□ 1.35
PPFIA3-208ENST00000602726 KXD1Q9BQD3 176 aa23.46■■□□□ 1.35
PPFIA3-208ENST00000602726 WNT16Q9UBV4 365 aa23.46■■□□□ 1.35
PPFIA3-208ENST00000602726 ARIH1Q9Y4X5 557 aaPredicted RBP23.46■■□□□ 1.35
PPFIA3-208ENST00000602726 GJA1P17302 382 aa23.45■■□□□ 1.34
PPFIA3-208ENST00000602726 NR2F2P24468 414 aa23.45■■□□□ 1.34
PPFIA3-208ENST00000602726 RPL13P26373 211 aaKnown RBP23.45■■□□□ 1.34
PPFIA3-208ENST00000602726 TNNC1P63316 161 aa23.45■■□□□ 1.34
PPFIA3-208ENST00000602726 CLDN10P78369 228 aa23.45■■□□□ 1.34
PPFIA3-208ENST00000602726 TAF12Q16514 161 aa23.45■■□□□ 1.34
PPFIA3-208ENST00000602726 WDR72Q3MJ13 1102 aa23.45■■□□□ 1.34
PPFIA3-208ENST00000602726 TMC8Q8IU68 726 aa23.45■■□□□ 1.34
PPFIA3-208ENST00000602726 SIX5Q8N196 739 aa23.45■■□□□ 1.34
PPFIA3-208ENST00000602726 KBTBD7Q8WVZ9 684 aa23.45■■□□□ 1.34
PPFIA3-208ENST00000602726 SYAP1Q96A49 352 aaPredicted RBP23.45■■□□□ 1.34
PPFIA3-208ENST00000602726 GSDMAQ96QA5 445 aa23.45■■□□□ 1.34
PPFIA3-208ENST00000602726 LPIN3Q9BQK8 851 aa23.45■■□□□ 1.34
PPFIA3-208ENST00000602726 PI4K2AQ9BTU6 479 aa23.45■■□□□ 1.34
PPFIA3-208ENST00000602726 LRRC3Q9BY71 257 aa23.45■■□□□ 1.34
PPFIA3-208ENST00000602726 GTF3C4Q9UKN8 822 aa23.45■■□□□ 1.34
PPFIA3-208ENST00000602726 NRG2O14511 850 aaPredicted RBP23.44■■□□□ 1.34
PPFIA3-208ENST00000602726 MOSPD3O75425 235 aa23.44■■□□□ 1.34
PPFIA3-208ENST00000602726 CLSTN1O94985 981 aa23.44■■□□□ 1.34
PPFIA3-208ENST00000602726 FGF19O95750 216 aa23.44■■□□□ 1.34
PPFIA3-208ENST00000602726 ATF6P18850 670 aa23.44■■□□□ 1.34
PPFIA3-208ENST00000602726 ATICP31939 592 aa23.44■■□□□ 1.34
PPFIA3-208ENST00000602726 MYL6P60660 151 aa23.44■■□□□ 1.34
PPFIA3-208ENST00000602726 TEAD2Q15562 447 aa23.44■■□□□ 1.34
PPFIA3-208ENST00000602726 NFIL3Q16649 462 aa23.44■■□□□ 1.34
PPFIA3-208ENST00000602726 TDRD10Q5VZ19 366 aaKnown RBP23.44■■□□□ 1.34
PPFIA3-208ENST00000602726 POTEHQ6S545 545 aa23.44■■□□□ 1.34
PPFIA3-208ENST00000602726 SMYD4Q8IYR2 804 aaPredicted RBP23.44■■□□□ 1.34
PPFIA3-208ENST00000602726 SHKBP1Q8TBC3 707 aa23.44■■□□□ 1.34
PPFIA3-208ENST00000602726 TMC2Q8TDI7 906 aa23.44■■□□□ 1.34
PPFIA3-208ENST00000602726 GPR152Q8TDT2 470 aa23.44■■□□□ 1.34
PPFIA3-208ENST00000602726 GIPC2Q8TF65 315 aa23.44■■□□□ 1.34
PPFIA3-208ENST00000602726 SMARCE1Q969G3 411 aa23.44■■□□□ 1.34
PPFIA3-208ENST00000602726 SNX25Q9H3E2 840 aa23.44■■□□□ 1.34
PPFIA3-208ENST00000602726 SLITRK6Q9H5Y7 841 aa23.44■■□□□ 1.34
PPFIA3-208ENST00000602726 SLC2A4RGQ9NR83 387 aa23.44■■□□□ 1.34
PPFIA3-208ENST00000602726 A0A1W2PRU2 124 aa23.43■■□□□ 1.34
PPFIA3-208ENST00000602726 HCRTO43612 131 aa23.43■■□□□ 1.34
PPFIA3-208ENST00000602726 ECI2O75521 394 aa23.43■■□□□ 1.34
PPFIA3-208ENST00000602726 STAU1O95793 577 aaKnown RBP23.43■■□□□ 1.34
PPFIA3-208ENST00000602726 WARSP23381 471 aaKnown RBP23.43■■□□□ 1.34
PPFIA3-208ENST00000602726 AVPR2P30518 371 aa23.43■■□□□ 1.34
PPFIA3-208ENST00000602726 VCPP55072 806 aaKnown RBP23.43■■□□□ 1.34
PPFIA3-208ENST00000602726 GPC5P78333 572 aa23.43■■□□□ 1.34
PPFIA3-208ENST00000602726 DLG4P78352 724 aa23.43■■□□□ 1.34
PPFIA3-208ENST00000602726 FAM78AQ5JUQ0 283 aa23.43■■□□□ 1.34
PPFIA3-208ENST00000602726 FLCNQ8NFG4 579 aa23.43■■□□□ 1.34
PPFIA3-208ENST00000602726 PKMYT1Q99640 499 aa23.43■■□□□ 1.34
PPFIA3-208ENST00000602726 SYT15Q9BQS2 421 aa23.43■■□□□ 1.34
PPFIA3-208ENST00000602726 GPR88Q9GZN0 384 aa23.43■■□□□ 1.34
PPFIA3-208ENST00000602726 KCNH6Q9H252 994 aa23.43■■□□□ 1.34
PPFIA3-208ENST00000602726 ABCB6Q9NP58 842 aa23.43■■□□□ 1.34
PPFIA3-208ENST00000602726 NXF1Q9UBU9 619 aaKnown RBP23.43■■□□□ 1.34
PPFIA3-208ENST00000602726 CDH9Q9ULB4 789 aa23.43■■□□□ 1.34
PPFIA3-208ENST00000602726 CA14Q9ULX7 337 aa23.43■■□□□ 1.34
PPFIA3-208ENST00000602726 PCDHA5Q9Y5H7 936 aa23.43■■□□□ 1.34
PPFIA3-208ENST00000602726 MAPK13O15264 365 aa23.42■■□□□ 1.34
PPFIA3-208ENST00000602726 KINO60870 393 aaKnown RBP23.42■■□□□ 1.34
PPFIA3-208ENST00000602726 C4BPAP04003 597 aaKnown RBP23.42■■□□□ 1.34
PPFIA3-208ENST00000602726 PDGFRBP09619 1106 aa23.42■■□□□ 1.34
PPFIA3-208ENST00000602726 FAM163BP0C2L3 166 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms