RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 SAR1AQ9NR31 198 aa9.29□□□□□ -0.92
COMMD3-215ENST00000602574 VPS51Q9UID3 782 aa9.29□□□□□ -0.92
COMMD3-215ENST00000602574 SALL4Q9UJQ4 1053 aa9.29□□□□□ -0.92
COMMD3-215ENST00000602574 STRIP2Q9ULQ0 834 aa9.29□□□□□ -0.92
COMMD3-215ENST00000602574 GUCA1BQ9UMX6 200 aa9.29□□□□□ -0.92
COMMD3-215ENST00000602574 SNX7Q9UNH6 387 aa9.29□□□□□ -0.92
COMMD3-215ENST00000602574 PA2G4Q9UQ80 394 aaKnown RBP9.29□□□□□ -0.92
COMMD3-215ENST00000602574 RBMX2Q9Y388 322 aaKnown RBP9.29□□□□□ -0.92
COMMD3-215ENST00000602574 SIGLEC1Q9BZZ2 1709 aa9.28□□□□□ -0.92
COMMD3-215ENST00000602574 MAP3K19Q56UN5 1328 aa9.28□□□□□ -0.92
COMMD3-215ENST00000602574 CCDC160A6NGH7 325 aa9.28□□□□□ -0.92
COMMD3-215ENST00000602574 H3BUI4 141 aa9.28□□□□□ -0.92
COMMD3-215ENST00000602574 PI15O43692 258 aa9.28□□□□□ -0.92
COMMD3-215ENST00000602574 PDE8AO60658 829 aa9.28□□□□□ -0.92
COMMD3-215ENST00000602574 KATNA1O75449 491 aa9.28□□□□□ -0.92
COMMD3-215ENST00000602574 HEXIM1O94992 359 aaKnown RBP9.28□□□□□ -0.92
COMMD3-215ENST00000602574 SYN1P17600 705 aa9.28□□□□□ -0.92
COMMD3-215ENST00000602574 CYP3A5P20815 502 aa9.28□□□□□ -0.92
COMMD3-215ENST00000602574 ADCY7P51828 1080 aa9.28□□□□□ -0.92
COMMD3-215ENST00000602574 C21orf59P57076 290 aa9.28□□□□□ -0.92
COMMD3-215ENST00000602574 CDC16Q13042 620 aa9.28□□□□□ -0.92
COMMD3-215ENST00000602574 APOFQ13790 326 aa9.28□□□□□ -0.92
COMMD3-215ENST00000602574 EFTUD2Q15029 972 aaKnown RBP eCLIP9.28□□□□□ -0.921e-10■■■■■ 27.9
COMMD3-215ENST00000602574 ALX1Q15699 326 aa9.28□□□□□ -0.92
COMMD3-215ENST00000602574 UAP1Q16222 522 aaPredicted RBP9.28□□□□□ -0.92
COMMD3-215ENST00000602574 C5orf22Q49AR2 442 aa9.28□□□□□ -0.92
COMMD3-215ENST00000602574 CERKLQ49MI3 558 aaPredicted RBP9.28□□□□□ -0.92
COMMD3-215ENST00000602574 AARS2Q5JTZ9 985 aaKnown RBP9.28□□□□□ -0.92
COMMD3-215ENST00000602574 HYIQ5T013 277 aa9.28□□□□□ -0.92
COMMD3-215ENST00000602574 OR7E24Q6IFN5 339 aa9.28□□□□□ -0.92
COMMD3-215ENST00000602574 UGT2A3Q6UWM9 527 aa9.28□□□□□ -0.92
COMMD3-215ENST00000602574 ARHGAP36Q6ZRI8 547 aa9.28□□□□□ -0.92
COMMD3-215ENST00000602574 CATSPER4Q7RTX7 472 aa9.28□□□□□ -0.92
COMMD3-215ENST00000602574 DPP9Q86TI2 863 aa9.28□□□□□ -0.92
COMMD3-215ENST00000602574 CNTROBQ8N137 903 aa9.28□□□□□ -0.92
COMMD3-215ENST00000602574 C8orf58Q8NAV2 365 aa9.28□□□□□ -0.92
COMMD3-215ENST00000602574 PMEPA1Q969W9 287 aa9.28□□□□□ -0.92
COMMD3-215ENST00000602574 CDCA5Q96FF9 252 aa9.28□□□□□ -0.92
COMMD3-215ENST00000602574 MNTQ99583 582 aa9.28□□□□□ -0.92
COMMD3-215ENST00000602574 TUBB6Q9BUF5 446 aa9.28□□□□□ -0.92
COMMD3-215ENST00000602574 HOXD1Q9GZZ0 328 aa9.28□□□□□ -0.92
COMMD3-215ENST00000602574 NTN4Q9HB63 628 aa9.28□□□□□ -0.92
COMMD3-215ENST00000602574 CYP4F11Q9HBI6 524 aa9.28□□□□□ -0.92
COMMD3-215ENST00000602574 KIAA1586Q9HCI6 787 aa9.28□□□□□ -0.92
COMMD3-215ENST00000602574 CYP4F12Q9HCS2 524 aa9.28□□□□□ -0.92
COMMD3-215ENST00000602574 ABHD10Q9NUJ1 306 aa9.28□□□□□ -0.92
COMMD3-215ENST00000602574 REXO2Q9Y3B8 237 aaKnown RBP9.28□□□□□ -0.92
COMMD3-215ENST00000602574 EPN1Q9Y6I3 576 aaPredicted RBP9.28□□□□□ -0.92
COMMD3-215ENST00000602574 CEPT1Q9Y6K0 416 aa9.28□□□□□ -0.92
COMMD3-215ENST00000602574 DCAF8L1A6NGE4 600 aa9.28□□□□□ -0.92
COMMD3-215ENST00000602574 ENC1O14682 589 aa9.28□□□□□ -0.92
COMMD3-215ENST00000602574 ZPR1O75312 459 aa9.28□□□□□ -0.92
COMMD3-215ENST00000602574 APBB3O95704 486 aa9.28□□□□□ -0.92
COMMD3-215ENST00000602574 AGTP01019 485 aa9.28□□□□□ -0.92
COMMD3-215ENST00000602574 GNRH1P01148 92 aa9.28□□□□□ -0.92
COMMD3-215ENST00000602574 RPS17P08708 135 aaKnown RBP9.28□□□□□ -0.92
COMMD3-215ENST00000602574 HADHAP40939 763 aa9.28□□□□□ -0.92
COMMD3-215ENST00000602574 NUBP1P53384 320 aa9.28□□□□□ -0.92
COMMD3-215ENST00000602574 GABREP78334 506 aa9.28□□□□□ -0.92
COMMD3-215ENST00000602574 GSTO1P78417 241 aa9.28□□□□□ -0.92
COMMD3-215ENST00000602574 RHAGQ02094 409 aa9.28□□□□□ -0.92
COMMD3-215ENST00000602574 FKBP4Q02790 459 aaKnown RBP eCLIP9.28□□□□□ -0.92
COMMD3-215ENST00000602574 KRT17Q04695 432 aa9.28□□□□□ -0.92
COMMD3-215ENST00000602574 IDI1Q13907 227 aa9.28□□□□□ -0.92
COMMD3-215ENST00000602574 KRT81Q14533 505 aa9.28□□□□□ -0.92
COMMD3-215ENST00000602574 KRT24Q2M2I5 525 aa9.28□□□□□ -0.92
COMMD3-215ENST00000602574 ANKRD20A4Q4UJ75 823 aa9.28□□□□□ -0.92
COMMD3-215ENST00000602574 SLC10A5Q5PT55 438 aa9.28□□□□□ -0.92
COMMD3-215ENST00000602574 FAM205BPQ63HN1 556 aa9.28□□□□□ -0.92
COMMD3-215ENST00000602574 COL23A1Q86Y22 540 aaPredicted RBP9.28□□□□□ -0.92
COMMD3-215ENST00000602574 PDSS2Q86YH6 399 aa9.28□□□□□ -0.92
COMMD3-215ENST00000602574 AHI1Q8N157 1196 aa9.28□□□□□ -0.92
COMMD3-215ENST00000602574 PPP4R1Q8TF05 950 aa9.28□□□□□ -0.92
COMMD3-215ENST00000602574 SLC9A6Q92581 669 aa9.28□□□□□ -0.92
COMMD3-215ENST00000602574 TOE1Q96GM8 510 aaKnown RBP9.28□□□□□ -0.92
COMMD3-215ENST00000602574 SERINC2Q96SA4 455 aa9.28□□□□□ -0.92
COMMD3-215ENST00000602574 MYD88Q99836 296 aa9.28□□□□□ -0.92
COMMD3-215ENST00000602574 ADAM7Q9H2U9 754 aa9.28□□□□□ -0.92
COMMD3-215ENST00000602574 OR51B5Q9H339 312 aa9.28□□□□□ -0.92
COMMD3-215ENST00000602574 ATP13A3Q9H7F0 1226 aa9.28□□□□□ -0.92
COMMD3-215ENST00000602574 BABAM1Q9NWV8 329 aa9.28□□□□□ -0.92
COMMD3-215ENST00000602574 DPP7Q9UHL4 492 aa9.28□□□□□ -0.92
COMMD3-215ENST00000602574 GMEB2Q9UKD1 530 aa9.28□□□□□ -0.92
COMMD3-215ENST00000602574 PTPRUQ92729 1446 aa9.27□□□□□ -0.93
COMMD3-215ENST00000602574 NALCNQ8IZF0 1738 aa9.27□□□□□ -0.93
COMMD3-215ENST00000602574 ZNF804BA4D1E1 1349 aa9.27□□□□□ -0.93
COMMD3-215ENST00000602574 H3BNX3 289 aa9.27□□□□□ -0.93
COMMD3-215ENST00000602574 DDX3XO00571 662 aaKnown RBP eCLIP9.27□□□□□ -0.933e-20■■□□□ 14.4
COMMD3-215ENST00000602574 DCTN3O75935 186 aa9.27□□□□□ -0.93
COMMD3-215ENST00000602574 CAPN1P07384 714 aa9.27□□□□□ -0.93
COMMD3-215ENST00000602574 ICAM2P13598 275 aa9.27□□□□□ -0.93
COMMD3-215ENST00000602574 JAK1P23458 1154 aa9.27□□□□□ -0.93
COMMD3-215ENST00000602574 PSMA5P28066 241 aa9.27□□□□□ -0.93
COMMD3-215ENST00000602574 MAGEA11P43364 429 aa9.27□□□□□ -0.93
COMMD3-215ENST00000602574 ASMTP46597 345 aa9.27□□□□□ -0.93
COMMD3-215ENST00000602574 NDUFA8P51970 172 aa9.27□□□□□ -0.93
COMMD3-215ENST00000602574 POLGP54098 1239 aaPredicted RBP9.27□□□□□ -0.93
COMMD3-215ENST00000602574 FOLH1Q04609 750 aa9.27□□□□□ -0.93
COMMD3-215ENST00000602574 PTK2Q05397 1052 aa9.27□□□□□ -0.93
COMMD3-215ENST00000602574 TOMM20Q15388 145 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms