RNA–Protein interactions for RNA: ENST00000601319.1

HERC3-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 1,298 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-214ENST00000601319 SOWAHAQ2M3V2 549 aa18.45■□□□□ 0.54
HERC3-214ENST00000601319 ZCWPW2Q504Y3 356 aa18.45■□□□□ 0.54
HERC3-214ENST00000601319 COBLL1Q53SF7 1204 aa18.45■□□□□ 0.54
HERC3-214ENST00000601319 INTS6LQ5JSJ4 861 aaKnown RBP18.45■□□□□ 0.54
HERC3-214ENST00000601319 CYP4A22Q5TCH4 519 aa18.45■□□□□ 0.54
HERC3-214ENST00000601319 LRRTM3Q86VH5 581 aa18.45■□□□□ 0.54
HERC3-214ENST00000601319 ELOA2Q8IYF1 753 aaPredicted RBP18.45■□□□□ 0.54
HERC3-214ENST00000601319 SPATA20Q8TB22 786 aa18.45■□□□□ 0.54
HERC3-214ENST00000601319 PLEKHO2Q8TD55 490 aa18.45■□□□□ 0.54
HERC3-214ENST00000601319 RSAD2Q8WXG1 361 aa18.45■□□□□ 0.54
HERC3-214ENST00000601319 ING5Q8WYH8 240 aa18.45■□□□□ 0.54
HERC3-214ENST00000601319 ZNF516Q92618 1163 aa18.45■□□□□ 0.54
HERC3-214ENST00000601319 FGF14Q92915 247 aa18.45■□□□□ 0.54
HERC3-214ENST00000601319 GSDMAQ96QA5 445 aa18.45■□□□□ 0.54
HERC3-214ENST00000601319 PKMYT1Q99640 499 aa18.45■□□□□ 0.54
HERC3-214ENST00000601319 LRRC3Q9BY71 257 aa18.45■□□□□ 0.54
HERC3-214ENST00000601319 KCNH6Q9H252 994 aa18.45■□□□□ 0.54
HERC3-214ENST00000601319 ABCB6Q9NP58 842 aa18.45■□□□□ 0.54
HERC3-214ENST00000601319 DDX43Q9NXZ2 648 aaKnown RBP18.45■□□□□ 0.54
HERC3-214ENST00000601319 HOOK1Q9UJC3 728 aaKnown RBP18.45■□□□□ 0.54
HERC3-214ENST00000601319 LRRIQ3A6PVS8 624 aaPredicted RBP18.44■□□□□ 0.54
HERC3-214ENST00000601319 PCSK1P29120 753 aa18.44■□□□□ 0.54
HERC3-214ENST00000601319 ATICP31939 592 aa18.44■□□□□ 0.54
HERC3-214ENST00000601319 CCR2P41597 374 aa18.44■□□□□ 0.54
HERC3-214ENST00000601319 ENPEPQ07075 957 aa18.44■□□□□ 0.54
HERC3-214ENST00000601319 ITIH5Q86UX2 942 aa18.44■□□□□ 0.54
HERC3-214ENST00000601319 TMC8Q8IU68 726 aa18.44■□□□□ 0.54
HERC3-214ENST00000601319 SUGP1Q8IWZ8 645 aaKnown RBP18.44■□□□□ 0.54
HERC3-214ENST00000601319 TMC2Q8TDI7 906 aa18.44■□□□□ 0.54
HERC3-214ENST00000601319 KBTBD7Q8WVZ9 684 aa18.44■□□□□ 0.54
HERC3-214ENST00000601319 PSMG2Q969U7 264 aa18.44■□□□□ 0.54
HERC3-214ENST00000601319 GTPBP4Q9BZE4 634 aaKnown RBP18.44■□□□□ 0.54
HERC3-214ENST00000601319 VRTNQ9H8Y1 702 aa18.44■□□□□ 0.54
HERC3-214ENST00000601319 SLC2A4RGQ9NR83 387 aa18.44■□□□□ 0.54
HERC3-214ENST00000601319 FRMD4BQ9Y2L6 1034 aa18.44■□□□□ 0.54
HERC3-214ENST00000601319 SLC27A5Q9Y2P5 690 aa18.44■□□□□ 0.54
HERC3-214ENST00000601319 MIA3Q5JRA6 1907 aa18.44■□□□□ 0.54
HERC3-214ENST00000601319 SMC2O95347 1197 aa18.43■□□□□ 0.54
HERC3-214ENST00000601319 FGF19O95750 216 aa18.43■□□□□ 0.54
HERC3-214ENST00000601319 FAM163BP0C2L3 166 aa18.43■□□□□ 0.54
HERC3-214ENST00000601319 HAPLN1P10915 354 aaPredicted RBP18.43■□□□□ 0.54
HERC3-214ENST00000601319 ATF6P18850 670 aa18.43■□□□□ 0.54
HERC3-214ENST00000601319 WARSP23381 471 aaKnown RBP18.43■□□□□ 0.54
HERC3-214ENST00000601319 NR2F2P24468 414 aa18.43■□□□□ 0.54
HERC3-214ENST00000601319 CASP4P49662 377 aa18.43■□□□□ 0.54
HERC3-214ENST00000601319 VEPH1Q14D04 833 aa18.43■□□□□ 0.54
HERC3-214ENST00000601319 EDRF1Q3B7T1 1238 aa18.43■□□□□ 0.54
HERC3-214ENST00000601319 TDRD10Q5VZ19 366 aaKnown RBP18.43■□□□□ 0.54
HERC3-214ENST00000601319 PARM1Q6UWI2 310 aa18.43■□□□□ 0.54
HERC3-214ENST00000601319 OSTM1Q86WC4 334 aa18.43■□□□□ 0.54
HERC3-214ENST00000601319 HS6ST3Q8IZP7 471 aa18.43■□□□□ 0.54
HERC3-214ENST00000601319 SYAP1Q96A49 352 aaPredicted RBP18.43■□□□□ 0.54
HERC3-214ENST00000601319 TCEAL4Q96EI5 215 aa18.43■□□□□ 0.54
HERC3-214ENST00000601319 XYLT2Q9H1B5 865 aa18.43■□□□□ 0.54
HERC3-214ENST00000601319 WNT16Q9UBV4 365 aa18.43■□□□□ 0.54
HERC3-214ENST00000601319 PCDHB5Q9Y5E4 795 aa18.43■□□□□ 0.54
HERC3-214ENST00000601319 ZNF638Q14966 1978 aaKnown RBP18.42■□□□□ 0.54
HERC3-214ENST00000601319 IKBKBO14920 756 aa18.42■□□□□ 0.54
HERC3-214ENST00000601319 NARSO43776 548 aaKnown RBP18.42■□□□□ 0.54
HERC3-214ENST00000601319 TACC1O75410 805 aa18.42■□□□□ 0.54
HERC3-214ENST00000601319 MOSPD3O75425 235 aa18.42■□□□□ 0.54
HERC3-214ENST00000601319 ECI2O75521 394 aa18.42■□□□□ 0.54
HERC3-214ENST00000601319 CST3P01034 146 aaPredicted RBP18.42■□□□□ 0.54
HERC3-214ENST00000601319 RPL13P26373 211 aaKnown RBP18.42■□□□□ 0.54
HERC3-214ENST00000601319 MGAT5BQ3V5L5 792 aa18.42■□□□□ 0.54
HERC3-214ENST00000601319 CFAP221Q4G0U5 840 aa18.42■□□□□ 0.54
HERC3-214ENST00000601319 ZNF658Q5TYW1 1059 aaPredicted RBP18.42■□□□□ 0.54
HERC3-214ENST00000601319 CEP135Q66GS9 1140 aa18.42■□□□□ 0.54
HERC3-214ENST00000601319 FUBP3Q96I24 572 aaKnown RBP eCLIP18.42■□□□□ 0.54
HERC3-214ENST00000601319 SEPT5Q99719 369 aaPredicted RBP18.42■□□□□ 0.54
HERC3-214ENST00000601319 TMLHEQ9NVH6 421 aa18.42■□□□□ 0.54
HERC3-214ENST00000601319 ABI2Q9NYB9 513 aaPredicted RBP18.42■□□□□ 0.54
HERC3-214ENST00000601319 MAPK8IP1Q9UQF2 711 aa18.42■□□□□ 0.54
HERC3-214ENST00000601319 HELZP42694 1942 aaKnown RBP18.42■□□□□ 0.54
HERC3-214ENST00000601319 TICRRQ7Z2Z1 1910 aa18.42■□□□□ 0.54
HERC3-214ENST00000601319 ANAPC1Q9H1A4 1944 aa18.42■□□□□ 0.54
HERC3-214ENST00000601319 PATJQ8NI35 1801 aa18.42■□□□□ 0.54
HERC3-214ENST00000601319 NRG2O14511 850 aaPredicted RBP18.41■□□□□ 0.54
HERC3-214ENST00000601319 SOAT2O75908 522 aa18.41■□□□□ 0.54
HERC3-214ENST00000601319 PDGFBP01127 241 aaPredicted RBP18.41■□□□□ 0.54
HERC3-214ENST00000601319 MYL4P12829 197 aa18.41■□□□□ 0.54
HERC3-214ENST00000601319 FCARP24071 287 aa18.41■□□□□ 0.54
HERC3-214ENST00000601319 MCCD1P59942 119 aaPredicted RBP18.41■□□□□ 0.54
HERC3-214ENST00000601319 MYL6P60660 151 aa18.41■□□□□ 0.54
HERC3-214ENST00000601319 TNNC1P63316 161 aa18.41■□□□□ 0.54
HERC3-214ENST00000601319 TRPC3Q13507 836 aa18.41■□□□□ 0.54
HERC3-214ENST00000601319 ZACNQ401N2 412 aa18.41■□□□□ 0.54
HERC3-214ENST00000601319 POTEHQ6S545 545 aa18.41■□□□□ 0.54
HERC3-214ENST00000601319 INTS8Q75QN2 995 aaKnown RBP18.41■□□□□ 0.54
HERC3-214ENST00000601319 DNAJB7Q7Z6W7 309 aaPredicted RBP18.41■□□□□ 0.54
HERC3-214ENST00000601319 SHKBP1Q8TBC3 707 aa18.41■□□□□ 0.54
HERC3-214ENST00000601319 ELSPBP1Q96BH3 223 aa18.41■□□□□ 0.54
HERC3-214ENST00000601319 MCRS1Q96EZ8 462 aa18.41■□□□□ 0.54
HERC3-214ENST00000601319 GPR88Q9GZN0 384 aa18.41■□□□□ 0.54
HERC3-214ENST00000601319 CHMP5Q9NZZ3 219 aa18.41■□□□□ 0.54
HERC3-214ENST00000601319 RAPGEFL1Q9UHV5 662 aa18.41■□□□□ 0.54
HERC3-214ENST00000601319 CDH9Q9ULB4 789 aa18.41■□□□□ 0.54
HERC3-214ENST00000601319 KINO60870 393 aaKnown RBP18.4■□□□□ 0.54
HERC3-214ENST00000601319 PHACTR2O75167 634 aa18.4■□□□□ 0.54
HERC3-214ENST00000601319 AKAP3O75969 853 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms